Nucleotide Global Alignment

Description

Query:
ccsbBroad304_07813
Subject:
XM_017026487.2
Aligned Length:
1613
Identities:
821
Gaps:
790

Alignment

Query    1  ATGGAAAAAAAGGAGTGTCCAGAAAAGAGTAGCAGCAGTGAGGAAGAGCTGCCGAGACGGGACAGTGGATCCAG  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  TAGGAACATAGATGCATCCAAACTCATTAGACTACAAGGATCACGGAAACTGTTGGTTGACAATAGCATACGGG  148
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  149  AACTGCAATACACAAAAACTGGAATTTTTTTTCAGGCTGAGGCCTGTGTGACAAATGATACGGTATACAGGGAG  222
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  223  CTACCCTGTGTTTCTGAGACCCTCTGTGACATCTCACATTTTTTCCAAGAAGATGATGAGACAGAGGCAGAGCC  296
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  297  ATTATTGTTCCGTGCTGTTCCTGAGTGTCAACTAT--CTGGGGGGGACATTCCCAGTGTATCAGAAGAGCAGGA  368
                                             ||  ||     |||.|||    |||||||||||||||||||
Sbjct    1  ---------------------------------ATGACT-----GGAAATT----GTGTATCAGAAGAGCAGGA  32

Query  369  ATCTTCAGAGGGACAAGATTCAGGAGACATTTGCTCAGAAGAGAATCAAATAGTTTCCTCTTATGCTTCTAAAG  442
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   33  ATCTTCAGAGGGACAAGATTCAGGAGACATTTGCTCAGAAGAGAATCAAATAGTTTCCTCTTATGCTTCTAAAG  106

Query  443  TCTGTTTTGAGATCGAAGAAGATTATAAAAATCGTCAGTTTCTGGGGCCTGAAGGAAATGTGGATGTTGAGTTG  516
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  107  TCTGTTTTGAGATCGAAGAAGATTATAAAAATCGTCAGTTTCTGGGGCCTGAAGGAAATGTGGATGTTGAGTTG  180

Query  517  ATTGATAAGAGCACAAACAGATACAGCGTTTGGTTCCCCACTGCTGGCTGGTATCTGTGGTCAGCCACAGGCCT  590
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  181  ATTGATAAGAGCACAAACAGATACAGCGTTTGGTTCCCCACTGCTGGCTGGTATCTGTGGTCAGCCACAGGCCT  254

Query  591  CGGCTTCCTGGTAAGGGATGAGGTCACAGTGACGATTGCGTTTGGTTCCTGGAGTCAGCACCTGGCCCTGGACC  664
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  255  CGGCTTCCTGGTAAGGGATGAGGTCACAGTGACGATTGCGTTTGGTTCCTGGAGTCAGCACCTGGCCCTGGACC  328

Query  665  TGCAGCACCATGAACAGTGGCTGGTGGGCGGCCCCTTGTTTGATGTCACTGCAGAGCCAGAGGAGGCTGTCGCC  738
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  329  TGCAGCACCATGAACAGTGGCTGGTGGGCGGCCCCTTGTTTGATGTCACTGCAGAGCCAGAGGAGGCTGTCGCC  402

Query  739  GAAATCCACCTCCCCCACTCCATCTCCCTCCAAGCAGGTGAGGTGGACGTCTCCTGGTTTCTCGTTGCCCATTT  812
            |||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  403  GAAATCCACCTCCCCCACTTCATCTCCCTCCAAGCAGGTGAGGTGGACGTCTCCTGGTTTCTCGTTGCCCATTT  476

Query  813  TAAGAATGAAGGGATGGTCCTGGAGCATCCAGCCCGGGTGGAGCCTTTCTATGCTGTCCTGGAAAGCCCCAGCT  886
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  477  TAAGAATGAAGGGATGGTCCTGGAGCATCCAGCCCGGGTGGAGCCTTTCTATGCTGTCCTGGAAAGCCCCAGCT  550

Query  887  TCTCTCTGATGGGCATCCTGCTGCGGATCGCCAGTGGGACTCGCCTCTCCATCCCCATCACTTCCAACACATTG  960
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  551  TCTCTCTGATGGGCATCCTGCTGCGGATCGCCAGTGGGACTCGCCTCTCCATCCCCATCACTTCCAACACATTG  624

Query  961  ATCTATTATCACCCCCACCCCGAAGATATTAAGTTCCACTTGTACCTTGTCCCCAGCGACGCCTTGCTAACAAA  1034
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  625  ATCTATTATCACCCCCACCCCGAAGATATTAAGTTCCACTTGTACCTTGTCCCCAGCGACGCCTTGCTAACAAA  698

Query 1035  GGCGATAGATGATGAGGAAGATCGCTTCCATGGTGTGCGCCTGCAGACTTCGCCCCCAATGGAACCCCTGAACT  1108
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  699  GGCGATAGATGATGAGGAAGATCGCTTCCATGGTGTGCGCCTGCAGACTTCGCCCCCAATGGAACCCCTGAACT  772

Query 1109  TTGGTTCCAGTTATATTGTGTCTAATTCTGCTAACCTGAAAGTAATGCCCAAG---------------------  1161
            |||||||||||||||||||||||||||||||||||||||||||||||||||||                     
Sbjct  773  TTGGTTCCAGTTATATTGTGTCTAATTCTGCTAACCTGAAAGTAATGCCCAAGGAGTTGAAATTGTCCTACAGG  846

Query 1162  --------------------------------------------------------------------------  1161
                                                                                      
Sbjct  847  AGCCCTGGAGAAATTCAGCACTTCTCAAAATTCTATGCTGGGCAGATGAAGGAACCCATTCAACTTGAGATTAC  920

Query 1162  --------------------------------------------------------------------------  1161
                                                                                      
Sbjct  921  TGAAAAAAGACATGGGACTTTGGTGTGGGATACTGAGGTGAAGCCAGTGGATCTCCAGCTTGTAGCTGCATCAG  994

Query 1162  --------------------------------------------------------------------------  1161
                                                                                      
Sbjct  995  CCCCTCCTCCTTTCTCAGGTGCAGCCTTTGTGAAGGAGAACCACCGGCAACTCCAAGCCAGGATGGGGGACCTG  1068

Query 1162  --------------------------------------------------------------------------  1161
                                                                                      
Sbjct 1069  AAAGGGGTGCTCGATGATCTCCAAGACAATGAGGTTCTTACTGAGAATGAGAAGGAGCTGGTGGAGCAGGAAAA  1142

Query 1162  --------------------------------------------------------------------------  1161
                                                                                      
Sbjct 1143  GACACGGCAGAGCAAGAATGAGGCCTTGCTGAGCATGGTGGAGAAGAAAGGGGACCTGGCCCTGGACGTGCTCT  1216

Query 1162  -----------------------------------------------------------  1161
                                                                       
Sbjct 1217  TCAGAAGCATTAGTGAAAGGGACCCTTACCTCGTGTCCTATCTTAGACAGCAGAATTTG  1275

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