Protein Global Alignment

Description

Query:
ccsbBroad304_07959
Subject:
NM_001306203.1
Aligned Length:
967
Identities:
794
Gaps:
130

Alignment

Query   1  MASNSTKSFLADAGYGEQELDANSALMELDKGLRSGKLGEQCEAVVRFPRLFQKYPFPILINSAFLKLADVFRV  74
                                                                                     
Sbjct   1  --------------------------------------------------------------------------  0

Query  75  GNNFLRLCVLKVTQQSEKHLEKILNVDEFVKRIFSVIHSNDPVARAITLRMLGSLASIIPERKNAHHSIRQSLD  148
                                                             ||||||||||||||||||||||||
Sbjct   1  --------------------------------------------------MLGSLASIIPERKNAHHSIRQSLD  24

Query 149  SHDNVEVEAAVFAAANFSAQSKDFAVGICNKISEMIQGLATPVDLKLKLIPILQHMHHDAILASSARQLLQQLV  222
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||
Sbjct  25  SHDNVEVEAAVFAAANFSAQSKDFAVGICNKISEMIQGLATPVDLKLKLIPILQHMHHDALLASSARQLLQQLV  98

Query 223  TSYPSTKMVIVSLHTFTLLAASSLVDTPKQIQLLLQYLKNDPRKAVKRLAIQDLKLLANKTPHTWSRENIQALC  296
           ||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||.|||||||.|||||||
Sbjct  99  TSYPSTKMVIVSLHTFTLLAASSLVDTPKQIQLLLQYLKNDPRKAVKRLAVQDLKLLASKTPHTWSKENIQALC  172

Query 297  ECALQTPYDSLKLGMLSVLSTLSGTIAIKHYFSIVPGNVSSSPRSSDLVKLAQECCYHNNRGIAAHGVRVLTNI  370
           ||||.||||||||||||||||||||||||||||.|||||.||||||||||||||||||.|||||||||||||||
Sbjct 173  ECALHTPYDSLKLGMLSVLSTLSGTIAIKHYFSVVPGNVGSSPRSSDLVKLAQECCYHSNRGIAAHGVRVLTNI  246

Query 371  TVSCQEKDLLALEQDAVFGLESLLVLCSQDDSPGAQATLKIALNCMVKLAKGRPRLSQSVVETLLTQLHSAQDA  444
           ||||||||||.|||||||||||||||||||||||||.|.|.||.||||||||||.||.|||.||||||||.|||
Sbjct 247  TVSCQEKDLLSLEQDAVFGLESLLVLCSQDDSPGAQSTVKSALSCMVKLAKGRPHLSRSVVDTLLTQLHSSQDA  320

Query 445  ARILMCHCLAAIAMQLPVLGDGMLGDLMELYKVIGRSATDKQQELLVSLATVIFVASQKALSVESKAVIKQQLE  518
           |||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||||.|.|||||||||
Sbjct 321  ARILMCHCLAAIAMQLPVLGDGMLGDLVELYKVIGRSATDKQQELLVSLATVIFVASQKALSAEVKAVIKQQLE  394

Query 519  SVSNGWTVYRIARQASRMGNHDMAKELYQSLLTQVASEHFYFWLNSLKEFSHAEQCLTGLQEENYSSALSCIAE  592
           |||.||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||...|||||||||
Sbjct 395  SVSSGWTVYRIARQASRMGNHDMARELYQSLLTQVASEHFYFWLNSLKEFSHAEQCLTGLQEDSFSSALSCIAE  468

Query 593  SLKFYHKGIASLTAASTPLNPLSFQCEFVKLRIDLLQAFSQLICTCNSLKTSPPPAIATTIAMTLGNDLQRCGR  666
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 469  SLKFYHKGIASLTAASTPLNPLSFQCEFVKLRIDLLQAFSQLICTCNSLKTSPPPAIATTIAMTLGNDLQRCGR  542

Query 667  ISNQMKQSMEEFRSLASRYGDLYQASFDADSATLRNVELQQQSCLLISHAIEALILDPESASFQEYGSTGTAHA  740
           |||||||||||||||||||.|||||||||||||||||||||||||||.||||||.|||||||||||||||.|||
Sbjct 543  ISNQMKQSMEEFRSLASRYRDLYQASFDADSATLRNVELQQQSCLLIAHAIEALVLDPESASFQEYGSTGAAHA  616

Query 741  DSEYERRMMSVYNHVLEEVESLNRKYTPVSYMHTACLCNAIIALLKVPLSFQRYFFQKLQSTSIKLALSPSPRN  814
           ||||||||||||..||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||.
Sbjct 617  DSEYERRMMSVYSRVLEEVESLNRKYAPVSYMHTACLCNAIIALLKVPLSFQRYFFQKLQSTSIKLALSPSPRS  690

Query 815  PAEPIAVQNNQQLALKVEGVVQHGSKPGLFRKIQSVCLNVSSTLQSKSGQDYKIPIDNMTNEMEQRVEPHNDYF  888
           |||||||||||||||||||||||||||||||..||||||||||||||||||||||||.||||||||||||||||
Sbjct 691  PAEPIAVQNNQQLALKVEGVVQHGSKPGLFRRVQSVCLNVSSTLQSKSGQDYKIPIDSMTNEMEQRVEPHNDYF  764

Query 889  STQFLLNFAILGTHNITVESSVKDANGIVWKTGPRTTIFVKSLEDPYSQQIRLQQQQAQQPLQ-----QQQQRN  957
           |||||||||.||||.|||||||.||||||||||||||.||||||||||||||| |||||||||     |.|.|.
Sbjct 765  STQFLLNFAVLGTHSITVESSVRDANGIVWKTGPRTTMFVKSLEDPYSQQIRL-QQQAQQPLQPQPQPQPQPRS  837

Query 958  AYTRF  962
           |||||
Sbjct 838  AYTRF  842

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