Protein Global Alignment

Description

Query:
ccsbBroad304_08342
Subject:
NM_001252497.1
Aligned Length:
1518
Identities:
551
Gaps:
928

Alignment

Query    1  MNSPVDPGARQALRKKPPERTPEDLNTIYSYLHGMEILSNLREHQLRLMSARARYERYSGNQVLFCSETIARCW  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  YILLSGSVLVKGSMVLPPCSFGKQFGGKRGCDCLVLEPSEMIVVENAKDNEDSILQREIPARQSRRRFRKINYK  148
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  149  GERQTITDDVEVNSYL-------------SLPADLTKMHLTENPHPQVTHVSSSQSGCSIASDSGSSSLSDIYQ  209
                        ...|             .|||||||||||.||||||||||||||||||||||||||||||||
Sbjct    1  ------------MAFLVRCYANCLQPWASKLPADLTKMHLTDNPHPQVTHVSSSQSGCSIASDSGSSSLSDIYQ  62

Query  210  ATESEVGDVDLTRLPEGPVDSEDDEEEDEEIDRTDPLQGRDLVRECLEKEPADKTDDDIEQLLEFMHQLPAFAN  283
            |||||||||||||||||||||||.|||.||||||||||||||||||||||||||||||.|||||||||||||||
Sbjct   63  ATESEVGDVDLTRLPEGPVDSEDEEEEEEEIDRTDPLQGRDLVRECLEKEPADKTDDDVEQLLEFMHQLPAFAN  136

Query  284  MTMSVRRELCSVMIFEVVEQAGAIILEDGQELDSWYVILNGTVEISHPDGKVENLFMGNSFGITPTLDKQYMHG  357
            |||||||||||||.|||||||||.|||||||||||||||||||||||||||.|||||||||||.||||||.|||
Sbjct  137  MTMSVRRELCSVMVFEVVEQAGAVILEDGQELDSWYVILNGTVEISHPDGKIENLFMGNSFGIVPTLDKQHMHG  210

Query  358  IVRTKVDDCQFVCIAQQDYWRILNHVEKNTHKVEEEGEIVMVHEHRELDRSGTRKGHIVIKATPERLIMHLIEE  431
            .|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  211  AVRTKVDDCQFVCIAQQDYWRILNHVEKNTHKVEEEGEIVMVHEHRELDRSGTRKGHIVIKATPERLIMHLIEE  284

Query  432  HSIVDPTYIEDFLLTYRTFLESPLDVGIKLLEWFKIDSLRDKVTRIVLLWVNNHFNDFEGDPAMTRFLEEFEKN  505
            |||||||||||||||||||||.|||||||||||||||.|||||||||||||||||||||||||||.||||||.|
Sbjct  285  HSIVDPTYIEDFLLTYRTFLETPLDVGIKLLEWFKIDNLRDKVTRIVLLWVNNHFNDFEGDPAMTQFLEEFERN  358

Query  506  LEDTKMNGHLRLLNIACAAKAKWRQVVLQKASRESPLQFSLNGGSEKGFGIFVEGVEPGSKAADSGLKRGDQIM  579
            |||||||||||||||||||||||||||||||||||||.|.|.||||||||.|||.||.||||||.|||||||.|
Sbjct  359  LEDTKMNGHLRLLNIACAAKAKWRQVVLQKASRESPLHFCLTGGSEKGFGVFVEEVESGSKAADAGLKRGDQVM  432

Query  580  EVNGQNFENITFMKAVEILRNNTHLALTVKTNIFVFKELLFRTEQEKSGVPHIPKIAEKKSNRHSIQHVPGDIE  653
            |||||||||||..||.||||||||||||||||||||||||.||||||||||||||||||||||||||.||||.|
Sbjct  433  EVNGQNFENITLAKALEILRNNTHLALTVKTNIFVFKELLSRTEQEKSGVPHIPKIAEKKSNRHSIQDVPGDME  506

Query  654  QTSQEKGSKKVKANTVSGGRNKIRKILDKTRFSILPPKLFSDGGLSQSQDDSIVGTRHCRHSLAIMPIPGTLSS  727
            |..||||.||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  507  QAPQEKGNKKIKANTVSGGRNKIRKILDKTRFSILPPKLFSDGGLSQSQDDSIVGTRHCRHSLAIMPIPGTLSS  580

Query  728  SSPDLLQPTTSMLDFSNPS-DIPDQVIRVFKVDQQSCYIIISKDTTAKEVVFHAVHEFGLTGASDTYSLCEVSV  800
            ||||||||||||||||||| ..|.                                                  
Sbjct  581  SSPDLLQPTTSMLDFSNPSGNVPM--------------------------------------------------  604

Query  801  TPEGVIKQRRLPDQFSKLADRIQLNGRYYLKNNMETETLCSDEDAQELVKESQLSMLQLSTIEVATQLSMRDFD  874
                                                                                      
Sbjct  605  --------------------------------------------------------------------------  604

Query  875  LFRNIEPTEYIDDLFKLNSKTGNTHLKRFEDIVNQETFWVASEILTEANQLKRMKIIKHFIKIALHCRECKNFN  948
                                                                                      
Sbjct  605  --------------------------------------------------------------------------  604

Query  949  SMFAIISGLNLASVARLRGTWEKLPSKYEKHLQDLQDIFDPSRNMAKYRNILSSQSMQPPIIPLFPVVKKDMTF  1022
                                                                                      
Sbjct  605  --------------------------------------------------------------------------  604

Query 1023  LHEGNDSKVDGLVNFEKLRMISKEIRQVVRMTSANMDPAMMFRQRKKRWRSLGSLSQGSTNSNMLDVQGGAHKK  1096
                                                                                      
Sbjct  605  --------------------------------------------------------------------------  604

Query 1097  RARRSSLLNAKKLYEDAQMARKVKQYLSSLDVETDEEKFQMMSLQWEPAYGTLTKNLSEKRSAKSSEMSPVPMR  1170
                                                                                      
Sbjct  605  --------------------------------------------------------------------------  604

Query 1171  SAGQTTKAHLHQPHRVSQVLQVPAVNLHPIRKKGQTKDPALNTSLPQKVLGTTEEISGKKHTEDTISVASSLHS  1244
                                                                                      
Sbjct  605  --------------------------------------------------------------------------  604

Query 1245  SPPASPQGSPHKGYTLIPSAKSDNLSDSSHSEISSRSSIVSNCSVDSMSAALQDERCSSQALAVPESTGALEKT  1318
                                                                                      
Sbjct  605  --------------------------------------------------------------------------  604

Query 1319  EHASGIGDHSQHGPGWTLLKPSLIKCLAVSSSVSNEEISQEHIIIEAADSGRGSWTSCSSSSHDNFQSLPNPKS  1392
                                                                                      
Sbjct  605  --------------------------------------------------------------------------  604

Query 1393  WDFLNSYRHTHLDDPIAEVEPTDSEPYSCSKSCSRTCGQCKGSLERKSWTSSSSLSDTYEPNYGTVKQRVLEST  1466
                                                                                      
Sbjct  605  --------------------------------------------------------------------------  604

Query 1467  PAESSEGLDPKDATDPVYKTVTSSTEKGLIENEQVSAV  1504
                                                  
Sbjct  605  --------------------------------------  604