Nucleotide Global Alignment

Description

Query:
ccsbBroad304_08521
Subject:
XR_378263.3
Aligned Length:
4095
Identities:
709
Gaps:
3294

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  GCCCCTGCCCTTTGGGTAAGGGAGGAGGAAGCCGGAGAGCGCGCTTTGCCTGAGCCGGCCCGAGAGCGGCTGAG  74

Query    1  ------------------------ATGGCTCCGGCCGCGGACCGAGAGGGCTACTGGGGCCCCACGACCTCCAC  50
                                    |||||||||||.|.||||||..|.|||||.||||||||||||||||||||
Sbjct   75  CAGGGTGTGTGGGGCGTCAGCGCGATGGCTCCGGCTGTGGACCGCAAAGGCTATTGGGGCCCCACGACCTCCAC  148

Query   51  GCTGGACTGGTGCGAGGAGAACTACTCCGTGACCTGGTACATCGCCGAGTTCTGGAATACAGTGAGTAACCTGA  124
            ..||||||||||.|||||||||||....|||||||.||.|.||||.||||||||||||||||||||||||||||
Sbjct  149  ATTGGACTGGTGTGAGGAGAACTATGTGGTGACCTTGTTCGTCGCTGAGTTCTGGAATACAGTGAGTAACCTGA  222

Query  125  TCATGATTATACCTCCAATGTTCGGTGCAATTCAGAGTGTTAGAGACGGTCTGGAAAAACGGTACATTGCTTCT  198
            |.|||||.|||||||||||.||.|||||||||||..|..||||||||.|.|||||.||.||||||||||||.||
Sbjct  223  TTATGATCATACCTCCAATTTTTGGTGCAATTCAAGGCATTAGAGACAGACTGGAGAAGCGGTACATTGCTGCT  296

Query  199  TATTTAGCACTCACAGTGGTAGGAATGGGATCCTGGTGCTTCCACATGACTCTGAAATATGAAATGCAGCTATT  272
            ||.|||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||.||
Sbjct  297  TACTTAGCACTCACAGTGGTAGGAATGGGATCCTGGTGTTTCCACATGACTCTGAAATATGAAATGCAGCTGTT  370

Query  273  GGATGAACTCCCAATGATATACAGCTGTTGCATATTTGTGTACTGCATGTTTGAATGTTTCAAGATCAAGAACT  346
            ||||||.|||||.|||||.||||||||.|||||||||||.||||||||||||||.||||||||||..||||.||
Sbjct  371  GGATGAGCTCCCCATGATTTACAGCTGCTGCATATTTGTATACTGCATGTTTGAGTGTTTCAAGACAAAGAGCT  444

Query  347  CAGTAAACTACCATCTGCTTTTTACCTTAGTTCTATTCAGTTTAATAGTAACCACAGTTTACCTTAAGGTAAAA  420
            ||.|||||||||||||.|||||||||.||.||||||.||||||||.||||||.||..|||||||.||.||.|||
Sbjct  445  CAATAAACTACCATCTTCTTTTTACCCTATTTCTATACAGTTTAACAGTAACTACGATTTACCTAAAAGTCAAA  518

Query  421  GAGCCAATATTCCATCAGGTCATGTATGGAATGTTGGTCTTTACATTAGTACTTCGATCTATTTATATTGTTA-  493
            ||.||.||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||| 
Sbjct  519  GAACCTATATTCCATCAGGTCATGTATGGAATGTTGGTCTTTACATTAGTACTTCGTTCTATTTATATTGTTAC  592

Query  494  --------------------------------------------------------------------------  493
                                                                                      
Sbjct  593  ATGTGTATCTCCAGAGTCTTGTCTGTACTGAGCATGAATGGACCATGTGCTGATGAAGTTCTTGCTCTCTCCTT  666

Query  494  --------------------------------------------------------------------------  493
                                                                                      
Sbjct  667  CGCGCCCTGCTACCTGGATAACCAAAGACATTCATTTCACCCTACTGAAGAATTTTGCTTTGTACTTCTTCTGA  740

Query  494  ---------------CATGGGTTTATCCATGGCTTAGAGGACTGGGTTATACATCATTGGGTATATTTTTATTG  552
                           ||||||||||||||||||||||||||||.|||||||||||.||...|.|.|||||||||
Sbjct  741  GAACTGAAGATTTGCCATGGGTTTATCCATGGCTTAGAGGACTAGGTTATACATCCTTAACTGTCTTTTTATTG  814

Query  553  GGATTTTTATTTTGGAATATAGATAACATATTTTGTGAGTCACTGAGGAACTTTCGAAAGAAGGTACCACCTAT  626
            ||.||||||||.|||||||||||||||||.||||||||.||||||||||||||||||||||..||.||.||..|
Sbjct  815  GGGTTTTTATTGTGGAATATAGATAACATCTTTTGTGATTCACTGAGGAACTTTCGAAAGAGAGTGCCCCCCGT  888

Query  627  CATAGGTATTACCACACAATTTCATGCATGGTGGCATATTTTAACTGGCCTTGGTTCCTATCTTCACATCCTTT  700
            |.|||||.||||.|||||.|||||||||||||||||||||.||||||||||.|||||.||||||||||||||||
Sbjct  889  CCTAGGTGTTACAACACAGTTTCATGCATGGTGGCATATTCTAACTGGCCTGGGTTCTTATCTTCACATCCTTT  962

Query  701  TCAGTTTGTATACAAGAACACTTTACCTGAGATATAGGCCAAAAGTGAAGTTTCTCTTTGGAATCTGGCCAGTG  774
            |||||||.|||||||||||||||||||||||.||.|||||||||||||||||||||||||||||||||||||..
Sbjct  963  TCAGTTTATATACAAGAACACTTTACCTGAGGTACAGGCCAAAAGTGAAGTTTCTCTTTGGAATCTGGCCAGCA  1036

Query  775  ATCCTGTTTGAGCCTCTCAGGAAGCAT-----------------------------------------------  801
            .||.|||||||.||||..||||||||.                                               
Sbjct 1037  GTCATGTTTGAACCTCAGAGGAAGCACTGATGAATTATTCTACCAAGAAAATAAAAAACACCTACTGTATGTAG  1110

Query  802  --------------------------------------------------------------------------  801
                                                                                      
Sbjct 1111  TTCTGCCAAGATGGTCAAGAACCCCCCAAAGACTTGTACATTTGAAGACACCATGCCCATCACAAGAGATGAAT  1184

Query  802  --------------------------------------------------------------------------  801
                                                                                      
Sbjct 1185  GACTCAGCCTGAATGACCCAGCCATAGAGAATGGGCAATTGGCCTGTTGGGTATTTAGCTCCTGGCTTTATCTC  1258

Query  802  --------------------------------------------------------------------------  801
                                                                                      
Sbjct 1259  GTTTGCCCTGGACCTAAGATGCTTAGAGAAAAACAGAAAGTGTATATTTATATTCTAGAATGGTGGAGAATTTG  1332

Query  802  --------------------------------------------------------------------------  801
                                                                                      
Sbjct 1333  GGCTTTTCTTAACAGGTTAACAGTTTGTGCTGGTCATTCATGGAAAATTAATATTTTTTTCTTTTTTTACAAGA  1406

Query  802  --------------------------------------------------------------------------  801
                                                                                      
Sbjct 1407  GTTGCATGTTAATTGTATCTTTATTAATTTTTAATTAAATATTGAACAAAGTCATTAAGTACTGGCAAAATACC  1480

Query  802  --------------------------------------------------------------------------  801
                                                                                      
Sbjct 1481  ATATCCAGATGGTTGACTGTGAGCCAGCACTTAGCCGTGTCATCTTTGATTTACATTCTTATATTAATTTCACA  1554

Query  802  --------------------------------------------------------------------------  801
                                                                                      
Sbjct 1555  GATGGCTTTCCAGTAATAAAAAAGAAAAGGTGTGGGATTCTAGGCAGCTCCTTGCTATCTGCCTTGGTGCTAGC  1628

Query  802  --------------------------------------------------------------------------  801
                                                                                      
Sbjct 1629  TGGAGTCTTAGAAGTAAACTCTGACCTGCCAGTGAGTGGGCTCTGTTCTCATCACATTCAAGATTTTGTCTTGG  1702

Query  802  --------------------------------------------------------------------------  801
                                                                                      
Sbjct 1703  ACTCTGTGGCCCACAGCCAATCAAAGGGGTGGGCCATCCAACACCCCTTCAGAAGCTTTTCCAGAACACCCGTG  1776

Query  802  --------------------------------------------------------------------------  801
                                                                                      
Sbjct 1777  GAATGTAGTCCTCTCACCAGTTAGAGGCTGTTGTTTTGCTTTCTTTGATCTTCAAATTATTATTACTATTGTGT  1850

Query  802  --------------------------------------------------------------------------  801
                                                                                      
Sbjct 1851  CTAGCAAATTTAACTGGTAATCTGTAAGACAACACAGTTTAATTGACTTTATCAGGGAAAGTTGTCAGTTTTTT  1924

Query  802  --------------------------------------------------------------------------  801
                                                                                      
Sbjct 1925  AATTTTTCCATTATGCAGTATGCATAGTGAAGCAAATAGTTCTAATTCGGATTTGAATGTATACGAAATTGAAT  1998

Query  802  --------------------------------------------------------------------------  801
                                                                                      
Sbjct 1999  TAATAATCACAAACAGTAAATGAAAGATCATATGTTATATCTAAGCTATGGCCCCAAAAGAAAAGTGGGGTTTT  2072

Query  802  --------------------------------------------------------------------------  801
                                                                                      
Sbjct 2073  TTTCCCCATGTGAAATTGGTTTTTAAAAAATTCTCATATTTTCAATATTCATTAACAAGCTTTAGCCTGGCAGG  2146

Query  802  --------------------------------------------------------------------------  801
                                                                                      
Sbjct 2147  GTGATGCATGTCTTTAATCACAGCACTTGAAAGGCAGAGATAGGCAGATCTCTGTGATTTTAAGGCCAGCCTGG  2220

Query  802  --------------------------------------------------------------------------  801
                                                                                      
Sbjct 2221  CCTATATAGTTCCAGGATAGTCAGGAATACATAGTGAAACTCTGTCTCAAAAAAGAAAAACAGTGTTGGTTCAT  2294

Query  802  --------------------------------------------------------------------------  801
                                                                                      
Sbjct 2295  TAGTTAGCCTTGGAATATTTATAAAACCAAAAATATTTCCTTCACCCTCTGGCTTTAGTTTTTTAATGCCAAGT  2368

Query  802  --------------------------------------------------------------------------  801
                                                                                      
Sbjct 2369  GCCAGTTTCCTTCCTTTACATCTCAGGTGGCCATTAGACAAACACACCTTTTATAAAAGCAAGACATGCCAAAA  2442

Query  802  --------------------------------------------------------------------------  801
                                                                                      
Sbjct 2443  CATAAGAAGACCTTAGTTGTACTTTGATCATAGGCATAGATCAGAGTCTAGAACACATTTACTGAATTTTCCAG  2516

Query  802  --------------------------------------------------------------------------  801
                                                                                      
Sbjct 2517  TTTCTTGTGTTCTGGAACAAGAACTGGACCAGAGACACATGAATGGTGATGGAAGTAGAGACCTTCTGTTAGGA  2590

Query  802  --------------------------------------------------------------------------  801
                                                                                      
Sbjct 2591  AGAAAGAAAAATATTCCCCAAAATGAGAGTATGTCTAAGGACTAAGAAAGGTCTAAGGCTGAAAAGCCTTGGAC  2664

Query  802  --------------------------------------------------------------------------  801
                                                                                      
Sbjct 2665  CAGAAGAGTCTCTGCTCTTTATAGGATCTTTGCATAGCCTCCATCTTTTCTGGCAATTAGGAAGGTAGGGTTTT  2738

Query  802  --------------------------------------------------------------------------  801
                                                                                      
Sbjct 2739  TTGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTTTTAAAGCATGCTGTTTTGTTATGCATAAATC  2812

Query  802  --------------------------------------------------------------------------  801
                                                                                      
Sbjct 2813  TGTTGGAAAGGTTTCCAGTCTTCCTTTGGGATTGGCTTTTGTTTGTTTGCACTAGGATTTCCTATTCTCCTACC  2886

Query  802  --------------------------------------------------------------------------  801
                                                                                      
Sbjct 2887  TCACTTTACCCCATCCTAAGAGCTGTAGTTCCAAAAATCTTTGTGAGGAGCTAAAGGATGACTATCTATTTTGT  2960

Query  802  --------------------------------------------------------------------------  801
                                                                                      
Sbjct 2961  ATAATTCCCATGTTAATGAGGGATGGAGTCTTTGCCAAAGAGAGTCTTTTCCTATTTTATCTACTGGTTGGAGA  3034

Query  802  --------------------------------------------------------------------------  801
                                                                                      
Sbjct 3035  GGAGGCTGTAGAGTTTTTGTTTTAGGAGTTGCCTTGAATCCTTGTATCATAATGATAAATTGTACATGATTTTT  3108

Query  802  --------------------------------------------------------------------------  801
                                                                                      
Sbjct 3109  TAAAAAAATGTAAGAATTTGGGCTGGAGGAGTGGTTTAGCATTTAAGAGCACTAATTGCTCTTACAGAAGCCTT  3182

Query  802  --------------------------------------------------------------------------  801
                                                                                      
Sbjct 3183  GAGTCTGATTCTCAGCACCCACATTGTAGCTCACAACCATCCATAACTATAGTTTCTAAGGTTCTAACAACTTC  3256

Query  802  --------------------------------------------------------------------------  801
                                                                                      
Sbjct 3257  TTATAACATCTGCTGGCACCAGACATGCACATTGTACACATACATATATAAGAAAAATATCCATATACCTAAAA  3330

Query  802  --------------------------------------------------------------------------  801
                                                                                      
Sbjct 3331  TAAATAATTTTTAAAAATGTCAATGTAAAAATAATATGATTATGTCAGCCATTAGCTCCAGAAAGGACCAGAAT  3404

Query  802  --------------------------------------------------------------------------  801
                                                                                      
Sbjct 3405  CAGGAAAAGCATAGCTATGCTTATGTAAATTATTCTGGATATGGTCCTTTAGGTTGTTAAAACAACAACAACCA  3478

Query  802  --------------------------------------------------------------------------  801
                                                                                      
Sbjct 3479  AAACAAAATCCACAAACAAATAAACTGATAGTTATGCATTAAAGTTGTGTCAAAATATGGAAAGAACAATTTGT  3552

Query  802  --------------------------------------------------------------------------  801
                                                                                      
Sbjct 3553  AGGAAAAAAAATTCAGTAGTGGACTAGATTAAAGAGAAGGAAGTATGGGATTGTAACCATTGAGTACCAACAGT  3626

Query  802  --------------------------------------------------------------------------  801
                                                                                      
Sbjct 3627  GCCAAAAGAGAACATGAAAAGCATAAGGCTATAAGGACTGATCGTTACTTTGCTTTTAAGTAAGAAGTGAAAGC  3700

Query  802  --------------------------------------------------------------------------  801
                                                                                      
Sbjct 3701  ATTCTGTTTGTAGTCTGAAGAGATCCTTTAATTCCTTCAGCTTTTTAGTGGCTTATACTGTAGGTCCTTTTTAT  3774

Query  802  --------------------------------------------------------------------------  801
                                                                                      
Sbjct 3775  TACATACAGAGTAAATATATCTGGTCTGATATTGTTGCTTGATGGTATTATAACTCCTATAATTTACATTAGGG  3848

Query  802  --------------------------------------------------------------------------  801
                                                                                      
Sbjct 3849  AAAGAAAGTTCAACTTCAAGACCTTTGGCAAATATAACCACCATTCTAGATGTATCTCAGCCTTAACAGAAATC  3922

Query  802  --------------------------------------------------------------------------  801
                                                                                      
Sbjct 3923  TTACCTCCATCACTTGTACACTAAGAACACTCCTATAAAAGGAATCAGTCCAACAGAAGAATTCTTAGCACAGC  3996

Query  802  --------------------------------------------------------------------------  801
                                                                                      
Sbjct 3997  ATTCAGAGCATTGGATCAACATAGAGCATTTTGATGCTATTTTATTTTTGTTACCCCTGACTTTTAAAAAATGA  4070

Query  802  -------------------------  801
                                     
Sbjct 4071  AATAAAATTTTAATATTTCACAGAA  4095

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