Nucleotide Global Alignment

Description

Query:
ccsbBroad304_08581
Subject:
NM_001202473.1
Aligned Length:
1445
Identities:
567
Gaps:
796

Alignment

Query    1  ------------------------------------------------ATGGCTCTTCCTCAGGGTCTACTGAC  26
                                                            |||||||||||||||||.|...||||
Sbjct    1  ATGTTACGTGAGGAAGCCACCAAGAAGAGCAAAGAAAAGGAGCCAGGGATGGCTCTTCCTCAGGGACGCTTGAC  74

Query   27  ATTCAGGGATGTGGCCATAGAATTCTCTCAGGAGGAGTGGAAATGCCTGGACCCTGCTCAGAGGACTCTATACA  100
            .||||||||||||||.|||||.||||||..|||||||||||||||||||.|||||||.||||||.||.||||||
Sbjct   75  TTTCAGGGATGTGGCTATAGAGTTCTCTTTGGAGGAGTGGAAATGCCTGAACCCTGCACAGAGGGCTTTATACA  148

Query  101  GAGACGTGATGCTGGAGAATTATAGGAACCTGGTCTCCCTGGATACCTCTTCCAAATGCATGATGAAGATGTTC  174
            |.|..||||||.|||||||.||.||||||||||..|...||||||.||||||||||||||||||||||..||||
Sbjct  149  GGGCTGTGATGTTGGAGAACTACAGGAACCTGGAGTTTGTGGATATCTCTTCCAAATGCATGATGAAGGAGTTC  222

Query  175  TCATCAACAGGACAAGGCAATACAGAAGTGGTCCACACAGGGACATTGCAAATACATGCAAGTCATCACATTGG  248
            |||||.||||..||||||||||||||||||.|||||||||||||||||||||.|||||.|||||||||||||.|
Sbjct  223  TCATCCACAGCGCAAGGCAATACAGAAGTGATCCACACAGGGACATTGCAAAGACATGAAAGTCATCACATTAG  296

Query  249  AGATACTTGCTTCCAGGAAATTGAGAAAGATATTCATGACTTTGTGTTTCAGTGGCAAGAAAATGAAACAAATG  322
            ||||..|||||||||||||||||||||||||||||||.||||||.||||||||||||||||.|.||||..||||
Sbjct  297  AGATTTTTGCTTCCAGGAAATTGAGAAAGATATTCATAACTTTGAGTTTCAGTGGCAAGAAGAGGAAAGGAATG  370

Query  323  GCCATGAAGCACTCATGACAAAAATCAAAAAGTTGA-TGAGTAGTACAGAGCGACATGATCAAAGGCATGCTGG  395
            |.||.|||||||.|||||||.||||||||.|||||| || ||||||||||.|||||||||||||||||||||||
Sbjct  371  GTCACGAAGCACCCATGACAGAAATCAAAGAGTTGACTG-GTAGTACAGACCGACATGATCAAAGGCATGCTGG  443

Query  396  AAACAAACCTATTAAAAATGAGCTTGGATCAAGCTTTCATTCGCATCTGCCTGAAGTGCACATATTTCACCCCG  469
            ||||||.|||||||||.||.||||||||||.||||||||||||||||||||||||.|.|||||||||||.||.|
Sbjct  444  AAACAAGCCTATTAAAGATCAGCTTGGATCCAGCTTTCATTCGCATCTGCCTGAACTCCACATATTTCAGCCTG  517

Query  470  AAGGGAAAATTGGTAATCAAGTTGAGAAGGCTATCAACGATGCTTTCTCAGTTTCAGCATCCCAACGAATTTCC  543
            ||.||||||||||||||||||||||||||.||||||.|.||||.|.||.|.|||...||||||||.|||||||.
Sbjct  518  AATGGAAAATTGGTAATCAAGTTGAGAAGTCTATCATCAATGCCTCCTTAATTTTGACATCCCAAAGAATTTCT  591

Query  544  TGTAGGCCAAAAACTCGTATTTCTAATAAGTATAGGAATAATTTCCTCCAGTCTTCATTACTCACACAAAAA-C  616
            |||||.||.|||||.||||||||||||||.|||.|||||||||.||||||.||||||||||.||.||||||| .
Sbjct  592  TGTAGTCCCAAAACCCGTATTTCTAATAACTATGGGAATAATTCCCTCCATTCTTCATTACCCATACAAAAATT  665

Query  617  GGGAAGTACACACAAGAGAAAAATCTTTCCAACGTAATGAGAGTGGCAAAGCCTTTAATGGTAGCTCACTCTTA  690
            ||||||||||||..||||||||||||||||||.|                                        
Sbjct  666  GGGAAGTACACATGAGAGAAAAATCTTTCCAATG----------------------------------------  699

Query  691  AAAAAACATCAGATAATCCATTTAGGAGACAAACAGTATAAATGTGATGTATGCGGCAAGGACTTTCATCAGAA  764
                                                                                      
Sbjct  700  --------------------------------------------------------------------------  699

Query  765  GCGATACCTTGCATGCCATAGATGTCACACTGGTGAGAATCCTTACAAGTGTAATGAGTGTGGCAAGACATTCA  838
                                                                                      
Sbjct  700  --------------------------------------------------------------------------  699

Query  839  GTCACAATTCAGCCCTGTTAGTTCACAAGGCAATTCATACTGGAGAGAAACCTTACAAGTGTAATGAATGTGGC  912
                                                                                      
Sbjct  700  --------------------------------------------------------------------------  699

Query  913  AAGGTTTTTAATCAACAATCAAACCTTGCACGTCATCATAGAGTTCATACTGGAGAGAAACCTTACAAATGTGA  986
                                                                                      
Sbjct  700  --------------------------------------------------------------------------  699

Query  987  AGAATGTGACAAAGTTTTCAGTCGCAAATCACACCTTGAAAGACATAGGAGAATTCACACTGGAGAGAAACCAT  1060
                                                                                      
Sbjct  700  --------------------------------------------------------------------------  699

Query 1061  ACAAATGTAAGGTTTGTGACAAGGCTTTCAGACGTGATTCACACCTGGCACAACATACTGTAATTCACACTGGA  1134
                                                                                      
Sbjct  700  --------------------------------------------------------------------------  699

Query 1135  GAGAAACCTTACAAGTGTAATGAGTGTGGCAAGACCTTCGTTCAAAATTCATCTCTTGTAATGCATAAGGTCAT  1208
                                                                                      
Sbjct  700  --------------------------------------------------------------------------  699

Query 1209  TCATACTGGAGAGAAACGTTACAAGTGTAATGAATGTGGCAAGGTTTTTAATCACAAATCAAACCTTGCATGTC  1282
                                                                                      
Sbjct  700  --------------------------------------------------------------------------  699

Query 1283  ATCGTAGACTTCATACTGGAGAGAAACCTTACAAGTGTAATGAATGTGGCAAGGTTTTTAATCGAAAATCAAAC  1356
                                                                                      
Sbjct  700  --------------------------------------------------------------------------  699

Query 1357  CTTGAACGTCATCATAGACTTCATACTGGAAAGAAATCT  1395
                                                   
Sbjct  700  ---------------------------------------  699

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