Nucleotide Global Alignment

Description

Query:
ccsbBroad304_08581
Subject:
XM_005258909.4
Aligned Length:
2667
Identities:
1080
Gaps:
1437

Alignment

Query    1  ATGGCTCTTCCTCAGGGTCTACTGACATTCAGGGATGTGGCCATAGAATTCTCTCAGGAGGAGTGGAAATGCCT  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  GGACCCTGCTCAGAGGACTCTATACAGAGACGTGATGCTGGAGAATTATAGGAACCTGGTCTCCCTGGATACCT  148
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  149  CTTCCAAATGCATGATGAAGATGTTCTCATCAACAGGACAAGGCAATACAGAAGTGGTCCACACAGGGACATTG  222
                       |||||||||..|.|||..||||||||.||||||||||.|||||||.|||||||||||||||||
Sbjct    1  -----------ATGATGAAGGAGGTCTTGTCAACAGGGCAAGGCAATAGAGAAGTGATCCACACAGGGACATTG  63

Query  223  CAAATACATGCAAGTCATCACATTGGAGATACTTGCTTCCAGGAAATTGAGAAAGATATTCATGACTTTGTGTT  296
            ||||.||||..||||.|||||||||||||...||||||||||||||||||||||||.||||||.||.|||.|||
Sbjct   64  CAAAGACATCAAAGTTATCACATTGGAGACTTTTGCTTCCAGGAAATTGAGAAAGAAATTCATAACATTGAGTT  137

Query  297  TCAGTGGCAAGAAAATGAAACAAATGGCCATGAAGCACTCATGACAAAAATCAAAAAGTTGA-TGAGTAGTACA  369
            ||||||.||||||.||||||.|||||||||||||||||.||.|||||||||.|||||||||| || ||||.|||
Sbjct  138  TCAGTGTCAAGAAGATGAAAGAAATGGCCATGAAGCACCCACGACAAAAATAAAAAAGTTGACTG-GTAGCACA  210

Query  370  GAGCGACATGATCAAAGGCATGCTGGAAACAAACCTATTAAAAATGAGCTTGGATCAAGCTTTCATTCGCATCT  443
            ||.|.|||||||||.|||||||||||||||||.|||||||||.||.|||||||||||||||||.||||.|||||
Sbjct  211  GACCAACATGATCACAGGCATGCTGGAAACAAGCCTATTAAAGATCAGCTTGGATCAAGCTTTTATTCACATCT  284

Query  444  GCCTGAAGTGCACATATTTCACCCCGAAGGGAAAATTGGTAATCAAGTTGAGAAGGCTATCAACGATGCTTTCT  517
            |||||||.|.|||||||||||...|.||||..||||||.|||||||.||||||||.|||.||..|||||||.||
Sbjct  285  GCCTGAACTCCACATATTTCAGATCAAAGGTGAAATTGCTAATCAACTTGAGAAGTCTACCAGTGATGCTTCCT  358

Query  518  CAGTTTCAGCATCCCAACGAATTTCCTGTAGGCCAAAAACTCGTATTTCTAATAAGTATAGGAATAATTTCCTC  591
            ||||||||.||||||||.||||||||||||||||..|||..|.||||||||||||.|||.||||||||..|||.
Sbjct  359  CAGTTTCAACATCCCAAAGAATTTCCTGTAGGCCCCAAATCCATATTTCTAATAACTATGGGAATAATCCCCTG  432

Query  592  CAGTCTTCATTACTCACACAAAAACGGGAAGTACACACAAGAGAAAAATCTTTCCAACGTAATGAGAGTGGCAA  665
            .|.||||||||||||.|||||||||.|||||||||||..||||||||||||||||.|.||||||||||||||||
Sbjct  433  AATTCTTCATTACTCCCACAAAAACAGGAAGTACACATGAGAGAAAAATCTTTCCCATGTAATGAGAGTGGCAA  506

Query  666  AGCCTTTAATGGTAGCTCACTCTTAAAAAAACATCAGATAATCCATTTAGGAGACAAACAGTATAAATGTGATG  739
            ||||||||||.|||||||||||||||..|||||.||||||..||||||||||||||||||.|||||||||||||
Sbjct  507  AGCCTTTAATTGTAGCTCACTCTTAAGGAAACACCAGATACCCCATTTAGGAGACAAACAATATAAATGTGATG  580

Query  740  TATGCGGCAAGGACTTTCATCAGAAGCGATACCTTGCATGCCA---TAGATGTCACACTGGTGAGAATCCTTAC  810
            ||||.||||||..||||.||||.||||.|||||||||||||||   |||||||||||||||.|||||.||||||
Sbjct  581  TATGTGGCAAGCTCTTTAATCACAAGCAATACCTTGCATGCCATCGTAGATGTCACACTGGAGAGAAACCTTAC  654

Query  811  AAGTGTAATGAGTGTGGCAAGACATTCA----------------------------------------------  838
            ||||||||.||||||||.|||.|.||||                                              
Sbjct  655  AAGTGTAAAGAGTGTGGAAAGTCCTTCAGTTACAAGTCATCCCTTACATGCCATCATAGACTTCATACTGGAGT  728

Query  839  --------------------------------------GTCACAATTCAGCCCTGTTAGTTCACAAGGCAATTC  874
                                                  ||||.|||||||||||..||.||||.||||||||||
Sbjct  729  AAAACCTTACAAGTGTAATGAGTGTGGCAAGGTCTTTCGTCAAAATTCAGCCCTTGTAATTCATAAGGCAATTC  802

Query  875  ATACTGGAGAGAAACCTTACAAGTGTAATGAATGTGGCAAGGTTTTTAATCAA---------------------  927
            ||||||||||||||||||||||||||||||||||||||||||.||||||||||                     
Sbjct  803  ATACTGGAGAGAAACCTTACAAGTGTAATGAATGTGGCAAGGCTTTTAATCAACAATCACACCTTTCACGCCAT  876

Query  928  --------------------------------------------------------------------------  927
                                                                                      
Sbjct  877  CAAAGACTTCATACTGGAGTGAAACCTTACAAATGTAAGATTTGTGAGAAGGCTTTTGCGTGTCATTCCTATCT  950

Query  928  -------------------------------------------------------------------------C  928
                                                                                     |
Sbjct  951  GGCAAACCATACTAGAATTCATAGTGGAGAGAAAACATACAAGTGTAATGAGTGTGGTAAGGCTTTTAATCATC  1024

Query  929  AATCAAACCTTGCACGTCATCATAGAGTTCATACTGGAGAGAAACCTTACAAATGTGAAGAATGTGACAAAGTT  1002
            ||||||.|||||||||||||||||.|.|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1025  AATCAAGCCTTGCACGTCATCATATACTTCATACTGGAGAGAAACCTTACAAATGTGAAGAATGTGACAAAGTT  1098

Query 1003  TTCAGTCGCAAATCACACCTTGAAAGACATAGGAGAATTCACACTGGAGAGAAACCATACAAATGTAAGGTTTG  1076
            |||||||..||||||..||||||.|||||||.|||||||||.||||||||||||||||||||||||||||||||
Sbjct 1099  TTCAGTCAGAAATCAACCCTTGAGAGACATAAGAGAATTCATACTGGAGAGAAACCATACAAATGTAAGGTTTG  1172

Query 1077  TGACAAGGCTTTCAGACGTG--ATTCACACCTGGCACAACATACTGTAATTCACACTGGAGAGAAACCTTACAA  1148
            |||.|..||||||  |||||  |||||||.|||||||.|||||....|||||||||||||||||||.|||||||
Sbjct 1173  TGATACAGCTTTC--ACGTGTAATTCACAGCTGGCACGACATAGAAGAATTCACACTGGAGAGAAAACTTACAA  1244

Query 1149  GTGTAATGAGTGTGGCAAGACCTTC------------------------------------------GTTCAAA  1180
            |||||||||||||.|||||||||||                                          |.|.|||
Sbjct 1245  GTGTAATGAGTGTCGCAAGACCTTCAGCCGCAGGTCATCCCTTCTATGCCATCGTAGACTTCATAGTGGTGAAA  1318

Query 1181  A---TT---------------------------------------CATCTCTTGTA------------------  1194
            |   ||                                       ||||.||||||                  
Sbjct 1319  AACCTTACAAGTGTAATCAGTGTGGCAATACCTTCCGTCACCGGGCATCCCTTGTATACCATCGTAGACTTCAC  1392

Query 1195  ---------------------------------------------ATGCATAA---GGTC--------------  1206
                                                         ||||.|||   .|||              
Sbjct 1393  ACTCTAGAGAAATCTTACAAATGTACGGTTTGTAACAAGGTTTTCATGCGTAATTCAGTCCTGGCTGTACATAC  1466

Query 1207  ----ATTCATACTGGAGAGAAACGTTACAAGTGTAATGAATGTGGCAAGGTTTTTAATCACAAATCAAACCTTG  1276
                |||||.||||.|.||||||.|||||||||||||||||||||.||.|.|||||||||..|||||.|.|||.
Sbjct 1467  TAGAATTCACACTGCAAAGAAACCTTACAAGTGTAATGAATGTGGGAAAGCTTTTAATCAACAATCACATCTTT  1540

Query 1277  CATGTCATCGTAGACTTCATACTGGAGAGAAACCTTACAAGTGTAATGAATGTGGCAAGGTTTTTAATCGAAAA  1350
            ||.|||||||||||||||||||||||||||||||||||||.|||.|.|.|||||.|||.||||||..||..|||
Sbjct 1541  CACGTCATCGTAGACTTCATACTGGAGAGAAACCTTACAAATGTGAAGCATGTGACAAAGTTTTTGGTCAGAAA  1614

Query 1351  TCAAACCTTGAACGTCATCAT---AGACTTCATACTGGAAAGAAATCT--------------------------  1395
            |||...|||||  |||| |||   |||.|||||||||||.|||||.|.                          
Sbjct 1615  TCAGCTCTTGA--GTCA-CATAAGAGAATTCATACTGGAGAGAAACCATACAGATGTCAGGTTTGTGACACAGC  1685

Query 1396  --------------------------------------------------------------------------  1395
                                                                                      
Sbjct 1686  TTTCACGTGGAATTCACAGCTGGCACGACATACAAGAATTCACACTGGAGAAAAAACTTACAAGTGTAATGAGT  1759

Query 1396  --------------------------------------------------------------------------  1395
                                                                                      
Sbjct 1760  GTGGGAAGACCTTCAGTTACAAGTCATCACTTGTATGGCATCGTAGACTTCATGGTGGAGAGAAATCTTACAAA  1833

Query 1396  --------------------------------------------------------------------------  1395
                                                                                      
Sbjct 1834  TGTAAGGTTTGTGACAAGGCTTTCGTGTGTCGTTCCTATGTGGCAAAACATACTAGAATTCACAGTGGAATGAA  1907

Query 1396  --------------------------------------------------------------------------  1395
                                                                                      
Sbjct 1908  ACCTTACAAGTGTAATGAGTGCAGCAAGACCTTCAGTAACAGGTCATCCCTTGTATGCCATCGTAGAATTCATA  1981

Query 1396  --------------------------------------------------------------------------  1395
                                                                                      
Sbjct 1982  GTGGTGAGAAACCTTACAAGTGTAGTGAGTGCAGCAAGACGTTCAGTCAGAAGGCAACCCTTCTATGCCATCGT  2055

Query 1396  --------------------------------------------------------------------------  1395
                                                                                      
Sbjct 2056  AGACTTCATAGTGGTGAGAAACCTTACAAGTGTAACGACTGTGGCAATACCTTCCGTCACTGGTCATCCCTTGT  2129

Query 1396  --------------------------------------------------------------------------  1395
                                                                                      
Sbjct 2130  ATACCATCGTAGACTTCATACTGGAGAGAAATCTTACAAATGTACGGTTTGTGACAAGGCTTTCGTGCGTAATT  2203

Query 1396  --------------------------------------------------------------------------  1395
                                                                                      
Sbjct 2204  CATACCTGGCAAGACATATTAGAATTCACACTGCAGAGAAACCTTACAAGTGTAATGAATGTGGAAAGGCTTTT  2277

Query 1396  --------------------------------------------------------------------------  1395
                                                                                      
Sbjct 2278  AATGAACAATCACACCTTTCACGTCATCATAGAATTCATACTGGAGAGAAACCTTACAAATGTGAAGCATGTGA  2351

Query 1396  --------------------------------------------------------------------------  1395
                                                                                      
Sbjct 2352  CAAAGTTTTCAGTCGCAAATCACACCTTAAAAGACATAGGATAATTCATACTGGAGAGAAACCTTACAAGTGTA  2425

Query 1396  --------------------------------------------------------------------------  1395
                                                                                      
Sbjct 2426  ATGAGTGTGGCAAAGCCTTTAGTGACCGGTCAACACTTATTCACCATCAGGCAATTCATGGTATAGGGAAATTT  2499

Query 1396  ---  1395
               
Sbjct 2500  GAT  2502

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