Nucleotide Global Alignment

Description

Query:
ccsbBroad304_08581
Subject:
XM_017026800.2
Aligned Length:
2157
Identities:
1196
Gaps:
873

Alignment

Query    1  ATGGCTCTTCCTCAGGGTCTACTGACATTCAGGGATGTGGCCATAGAATTCTCTCAGGAGGAGTGGAAATGCCT  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  GGACCCTGCTCAGAGGACTCTATACAGAGACGTGATGCTGGAGAATTATAGGAACCTGGTCTCCCTGGATACCT  148
                                              |||||||||||||||||||||||||||||||||||||.||
Sbjct    1  ----------------------------------ATGCTGGAGAATTATAGGAACCTGGTCTCCCTGGATATCT  40

Query  149  CTTCCAAATGCATGATGAAGATGTTCTCATCAACAGGACAAGGCAATACAGAAGTGGTCCACACAGGGACATTG  222
            |||||||||||||||||.|   |||||||||||.|||..|||||||||||||||||.|||||||||||||||||
Sbjct   41  CTTCCAAATGCATGATGGA---GTTCTCATCAATAGGGAAAGGCAATACAGAAGTGATCCACACAGGGACATTG  111

Query  223  CAAATACATGCAAGTCATCACATTGGAGATACTTGCTTCCAGGAAATTGAGAAAGATATTCATGACTTTGTGTT  296
            ||||.||..||||||||||||||||||||...||||||||||||||||||||||||.|||||||||||||||||
Sbjct  112  CAAAGACTGGCAAGTCATCACATTGGAGAATGTTGCTTCCAGGAAATTGAGAAAGACATTCATGACTTTGTGTT  185

Query  297  TCAGTGGCAAGAAAATGAAACAAATGGCCATGAAGCACTCATGACAAAAATCAAAAAGTTGATGAGTAGTACAG  370
            |||||||||||||.||||||||||||||||||||||||.|||||||.||||||||.||||||.|.|||||||||
Sbjct  186  TCAGTGGCAAGAAGATGAAACAAATGGCCATGAAGCACCCATGACAGAAATCAAAGAGTTGACGGGTAGTACAG  259

Query  371  AGCGACATGATCAAAGGCATGCTGGAAACAAACCTATTAAAAATGAGCTTGGATCAAGCTTTCATTCGCATCTG  444
            |.|.|.|||||||||||||||||||||||||.|||||||||.||.||||||||||||||||||||||.||||||
Sbjct  260  ACCAATATGATCAAAGGCATGCTGGAAACAAGCCTATTAAATATCAGCTTGGATCAAGCTTTCATTCACATCTG  333

Query  445  CCTGAAGTGCACATATTTCACCCCGAAGGGAAAATTGGTAATCAAGTTGAGAAGGCTATCAACGATGCTTTCTC  518
            ||||||.|||||||||||||.||||||||||||||||||||||||.||||||||.||||||||.||||||.|||
Sbjct  334  CCTGAACTGCACATATTTCAGCCCGAAGGGAAAATTGGTAATCAACTTGAGAAGTCTATCAACAATGCTTCCTC  407

Query  519  AGTTTCAGCATCCCAACGAATTTCCTGTAGGCCAAAAACTCGTATTTCTAATAAGTATAGGAATAATTTCCTCC  592
            |||||||.||||||||.|||||||.||||||||.|||||.|.||||||||||||.|||.|||||||||||.|||
Sbjct  408  AGTTTCAACATCCCAAAGAATTTCTTGTAGGCCCAAAACCCATATTTCTAATAACTATGGGAATAATTTCTTCC  481

Query  593  AGTCTTCATTACTCACACAAAAACGGGAAGTACACACAAGAGAAAAATCTTTCCAACGTAATGAGAGTGGCAAA  666
            |.|||||||||||||||||.||||.|||.|||||||..|.||||||||||||||||..||||||||||||||||
Sbjct  482  ATTCTTCATTACTCACACAGAAACAGGATGTACACAGGAAAGAAAAATCTTTCCAATTTAATGAGAGTGGCAAA  555

Query  667  GCCTTTAATGGTAGCTCACTCTTAAAAAAACATCAGATAATCCATTTAGGAGACAAACAGTATAAATGTGATGT  740
            .||||||||.|||||||||||||.|||||||||||||||||.|||.|||||||.|||||.||||||||||||||
Sbjct  556  TCCTTTAATTGTAGCTCACTCTTTAAAAAACATCAGATAATTCATCTAGGAGAGAAACAATATAAATGTGATGT  629

Query  741  ATGCGGCAAGGACTTTCATCAGAAGCGATACCTTGCATGCCA---TAGATGTCACACTGGTGAG----------  801
            |||.|||||.||||||.||||||||||||||||||||..|||   |||||||||||||||||||          
Sbjct  630  ATGTGGCAAAGACTTTAATCAGAAGCGATACCTTGCACACCATCGTAGATGTCACACTGGTGAGAAACCTTACA  703

Query  802  --------------------------------------------------------------------------  801
                                                                                      
Sbjct  704  TGTGTAATAAATGTGGCAAGGTTTTTAATAAAAAAGCATACCTTGCACGTCATTATAGACGTCATACTGGAGAA  777

Query  802  AATCCTTACAAGTGTAATGAGTGTGGCAAGACATTCAGTCACAATTCAGCCCTGTTAGTTCACAAGGCAATTCA  875
            ||.|||||||||||||||||||||||||||||.||||||.||||.||||||||.||||||||||||.|||||||
Sbjct  778  AAACCTTACAAGTGTAATGAGTGTGGCAAGACGTTCAGTGACAAGTCAGCCCTCTTAGTTCACAAGACAATTCA  851

Query  876  TACTGGAGAGAAACCTTACAAGTGTAATGAATGTGGCAAGGTTTTTAATCAACAATCAAACCTTGCACGTCATC  949
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  852  TACTGGAGAGAAACCTTACAAGTGTAATGAATGTGGCAAGGTTTTTAATCAACAATCAAACCTTGCACGTCATC  925

Query  950  ATAGAG--------------------------------------------------------------------  955
            ||||||                                                                    
Sbjct  926  ATAGAGTTCATACTGGAGAGAAACCTTACCAATGTAAAGAATGTGACAAAGTTTTCAGTCGCAAATCATACCTT  999

Query  956  --------------------------------------------------------------------------  955
                                                                                      
Sbjct 1000  GAAAGACATAGGAGAATTCACACTGGTGAGAAACCATACAAATGTAAGGTTTGTGACAAGGCTTTCAGACATGA  1073

Query  956  --------------------------------------------------------------------------  955
                                                                                      
Sbjct 1074  TTCACACCTGGCACAGCATATTGTAATTCACACTAGAGAGAAACCTTACAAGTGTAATGAGTGTGGCAAAACGT  1147

Query  956  --------------------------------------------------------------------------  955
                                                                                      
Sbjct 1148  TTGGTGAAAATTCAGCCCTCTTAGTTCACAAGACAATTCATACTGGAGAGAAACCTTACAAGTGTAATGAATGT  1221

Query  956  ----------------------------------------------TTCATACTGGAGAGAAACCTTACAAATG  983
                                                          ||||||||||||||||||||||||||||
Sbjct 1222  GGCAAGGTTTTCAATCAACAATCAAACCTTGCACGTCATCATAGACTTCATACTGGAGAGAAACCTTACAAATG  1295

Query  984  TGAAGAATGTGACAAAGTTTTCAGTCGCAAATCACACCTTGAAAGACATAGGAGAATTCACACTGGAGAGAAAC  1057
            |.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||
Sbjct 1296  TAAAGAATGTGACAAAGTTTTCAGTCGCAAATCACACCTTGAAAGACATAGGAGAATTCACACTGGTGAGAAAC  1369

Query 1058  CATACAAATGTAAGGTTTGTGACAAGGCTTTCAGACGTGATTCACACCTGGCACAACATACTGTAATTCACACT  1131
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1370  CATACAAATGTAAGGTTTGTGACAAGGCTTTCAGACGTGATTCACACCTGGCACAACATACTGTAATTCACACT  1443

Query 1132  GGAGAGAAACCTTACAAGTGTAATGAGTGTGGCAAGACCTTCGTTCAAAATTCATCTCTTGTAATGCATAAGGT  1205
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1444  GGAGAGAAACCTTACAAGTGTAATGAGTGTGGCAAGACCTTCGTTCAAAATTCATCTCTTGTAATGCATAAGGT  1517

Query 1206  CATTCATACTGGAGAGAAACGTTACAAGTGTAATGAATGTGGCAAGGTTTTTAATCACAAATCAAACCTTGCAT  1279
            |||||||||||||||||||||||||||||||||||||||||||||...|||||||||||||||||.||||||||
Sbjct 1518  CATTCATACTGGAGAGAAACGTTACAAGTGTAATGAATGTGGCAAAAGTTTTAATCACAAATCAAGCCTTGCAT  1591

Query 1280  GTCATCGTAGACTTCATACTGGAGAGAAACCTTACAAGTGTAATGAATGTGGCAAGGTTTTTAATCGAAAATCA  1353
            .|||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||....|.|.|||
Sbjct 1592  ATCATCATAGACTTCATACTGGAGAGAAACCTTACAAGTGTAATGAATGTGGCAAGGTTTTTAGGACACAGTCA  1665

Query 1354  AACCTTGAACGTCATCATAGACTTCATACTGGAAAGAAATCT--------------------------------  1395
            .|.||||.|.|||||||||||||||||||||||.|||||.||                                
Sbjct 1666  CAACTTGCATGTCATCATAGACTTCATACTGGAGAGAAACCTTACAAATGTGAAGAATGTGACAAAGTTTTCAA  1739

Query 1396  --------------------------------------------------------------------------  1395
                                                                                      
Sbjct 1740  TATCAAATCACACCTTGAAATACATAGGAGAGTTCATACTGGAGAGAAACCATACAAATGTAGGGTTTGCGACA  1813

Query 1396  --------------------------------------------------------------------------  1395
                                                                                      
Sbjct 1814  AGGCTTTTGGGCGTGATTCATACCTTGCACAACATCAGAGAGTTCACACTGGAGAGAAACCATACAAATGTAAG  1887

Query 1396  --------------------------------------------------------------------------  1395
                                                                                      
Sbjct 1888  GTTTGTGACAAGGCTTTCAAGTGTTACTCACACCTGGCACAACATACTAGAATTCATACTGGAGAGAAACCTTT  1961

Query 1396  --------------------------------------------------------------------------  1395
                                                                                      
Sbjct 1962  CAAGTGTAGTGAGTGTGGCAAAGCCTTTCGTGCACAGTCAACACTTATTCACCATCAGGCAATCCATGGTGTAG  2035

Query 1396  -----------  1395
                       
Sbjct 2036  GGAAACTTGAC  2046

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