Nucleotide Global Alignment

Description

Query:
ccsbBroad304_08581
Subject:
XM_017027444.1
Aligned Length:
1581
Identities:
1053
Gaps:
360

Alignment

Query    1  ATGGCTCTTCCTCAGGGTCTACTGACATTCAGGGATGTGGCCATAGAATTCTCTCAGGAGGAGTGGAAATGCCT  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  GGACCCTGCTCAGAGGACTCTATACAGAGACGTGATGCTGGAGAATTATAGGAACCTGGTCTCCCTGGATACCT  148
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  149  CTTCCAAATGCATGATGAAGATGTTCTCATCAACAGGACAAGGCAATACAGAAGTGGTCCACACAGGGACATTG  222
                       |||.||||||.|||.||.||||||||.||||||||||||||||||.|||||||||||||||||
Sbjct    1  -----------ATGTTGAAGACGTTGTCGTCAACAGGGCAAGGCAATACAGAAGTGATCCACACAGGGACATTG  63

Query  223  CAAATACATGCAAGTCATCACATTGGAGATACTTGCTTCCAGGAAATTGAGAAAGATATTCATGACTTTGTGTT  296
            ||.|.|||.||||||||||||||||||||...|||.|||||.||||||||||||||.|||||||.|||.|.|||
Sbjct   64  CACAGACAAGCAAGTCATCACATTGGAGAATTTTGTTTCCATGAAATTGAGAAAGACATTCATGGCTTCGAGTT  137

Query  297  TCAGTGGCAAGAAAATGAAACAAATGGCCATGAAGCACTCATGACAAAAATCAAAAAGTT-GATGAGTAGTACA  369
            |||||||.|||||.||||||||||||||||||.|||||.|||||||.||||||||.|||| |.|| ||||||||
Sbjct  138  TCAGTGGAAAGAAGATGAAACAAATGGCCATGCAGCACCCATGACAGAAATCAAAGAGTTGGCTG-GTAGTACA  210

Query  370  GAGCGACATGATCAAAGGCATGCTGGAAACAAACCTATTAAAAATGAGCTTGGATCAAGCTTTCATTCGCATCT  443
            |..|.|||||||||||||||||||||||||||.|.|||||||.||.|||||||||||||||||||||.||||||
Sbjct  211  GGCCAACATGATCAAAGGCATGCTGGAAACAAGCGTATTAAAGATCAGCTTGGATCAAGCTTTCATTTGCATCT  284

Query  444  GCCTGAAGTGCACATATTTCACCCCGAAGGGAAAATTGGTAATCAAGTTGAGAAGGCTATCAACGATGCTTTCT  517
            |||||||..||||||||||||..|.||||||||||||||||||||||||||||||.||||||||.||||||.||
Sbjct  285  GCCTGAACCGCACATATTTCAGTCTGAAGGGAAAATTGGTAATCAAGTTGAGAAGTCTATCAACAATGCTTCCT  358

Query  518  CAGTTTCAGCATCCCAACGAATTTCCTGTAGGCCAAAAACTCGTATTTCTAATAAGTATAGGAATAATTTCCTC  591
            ||||||||.||||||||.||||||..||||||||.|||||.|.||||||||||||||||.|.|||||||.||||
Sbjct  359  CAGTTTCAACATCCCAAAGAATTTGTTGTAGGCCCAAAACCCATATTTCTAATAAGTATGGAAATAATTCCCTC  432

Query  592  CAGTCTTCATTACTCACACAAAAACGGGAAGTACACACAAGAGAAAAATCTTTCCAACGTAATGAGAGTGGCAA  665
            ||.|||||||||||||||||||||.||||||||||||..||||||||||||||..||.|||...||||...|||
Sbjct  433  CATTCTTCATTACTCACACAAAAATGGGAAGTACACATGAGAGAAAAATCTTTTGAATGTATACAGAGCTTCAA  506

Query  666  AGCCTTTAATGGTAGCTCACTCTTAAAAAAACATCAGATAATCCATTTAGGAGACAAACAGTATAAATGTGATG  739
            |.||||||||.|.|||||||||||||||||||||||||||||.||.||||.|||.|||||.|.|||||||||||
Sbjct  507  ATCCTTTAATTGCAGCTCACTCTTAAAAAAACATCAGATAATTCACTTAGAAGAGAAACAATGTAAATGTGATG  580

Query  740  TATGCGGCAAGGACTTTCATCAGAAGCGATACCTTGCATGCCA---TAGATGTCACACTGGTGAGAATCCTTAC  810
            ||||.|||||||.||||.|||||||||||||||||||.|||||   |||||||||||||||||||||.||||||
Sbjct  581  TATGTGGCAAGGTCTTTAATCAGAAGCGATACCTTGCCTGCCATCGTAGATGTCACACTGGTGAGAAACCTTAC  654

Query  811  AAGTGTAATGAGTGTGGCAAGACATTCAGTCACAATTCAGCCCTGTTAGTTCACAA------------------  866
            |||||||||||||||||||||||.||..||||.||||||.||||.||..|||||||                  
Sbjct  655  AAGTGTAATGAGTGTGGCAAGACCTTTGGTCATAATTCATCCCTCTTCATTCACAAAGCGCTTCATACTGGAGA  728

Query  867  --------------------------------------------------------------------------  866
                                                                                      
Sbjct  729  GAAACCTTATGAATGTGAAGAATGTGACAAAGTTTTCAGTCGCAAATCACACCTTGAAAGACATAAGAGGATTC  802

Query  867  ----------------------------------------------------------------GGCAA-----  871
                                                                            |||||     
Sbjct  803  ATACTGGAGAGAAACCATACAAATGTAAGGTTTGTGATGAGGCTTTCGCATATAATTCATATCTGGCAAAACAT  876

Query  872  -------TTCATACTGGAGAGAAACCTTACAAGTGTAATGAATGTGGCAAGGTTTTTAATCAACAATCAAACCT  938
                   ||||.|||||||||||||||||||..|||||||||||||||||.||||||||||.||.|||||.|||
Sbjct  877  ACTATACTTCACACTGGAGAGAAACCTTACACATGTAATGAATGTGGCAAAGTTTTTAATCGACTATCAACCCT  950

Query  939  TGCACGTCATCATAGAGTTCATACTGGAGAGAAACCTTACAAATGTGAAGAATGTGACAAAGTTTTCAGTCGCA  1012
            ||||||.|||||||||.||||||||||||||||||||||||||||||||||.||||||||||||||||||||||
Sbjct  951  TGCACGCCATCATAGACTTCATACTGGAGAGAAACCTTACAAATGTGAAGAGTGTGACAAAGTTTTCAGTCGCA  1024

Query 1013  AATCACACCTTGAAAGACATAGGAGAATTCACACTGGAGAGAAACCATACAAATGTAAGGTTTGTGACAAGGCT  1086
            |||||||||||||||||||||||||.|||||.|.||||||||||||.|||||||||.|.|..|||..|||.|.|
Sbjct 1025  AATCACACCTTGAAAGACATAGGAGGATTCATAGTGGAGAGAAACCTTACAAATGTGAAGAATGTTGCAAAGTT  1098

Query 1087  TTCAGACGTGATTCACACCTGGCACAACATACTGTA--ATTCACACTGGAGAGAAACCTTACAAGTGTAATGAG  1158
            |||||.||..|.|||.||||||  .||.|.||.|.|  |||||.||||||||||||||.|||||.|||||.|..
Sbjct 1099  TTCAGTCGCAAATCAAACCTGG--AAAGACACAGGAGGATTCATACTGGAGAGAAACCATACAAATGTAAGGTT  1170

Query 1159  TGTGGCAAGACCTTCGTTCAAA---ATTCATCTCTTGTAATGCATAAGGTCA-----TTCATACTGGAGAGAAA  1224
            ||||.||||.|.|||   ||.|   ||||| |.|.||    |||.||..|||     |||||||||||||||||
Sbjct 1171  TGTGACAAGGCTTTC---CAGAGGGATTCA-CACCTG----GCACAACATCAGAGAGTTCATACTGGAGAGAAA  1236

Query 1225  CGTTACAAGTGTAATGAATGTGGCAAGGTTTTTAATCACAAATCAAACCTTGCATGT----CATCGTAGACTTC  1294
            |.|||||||||||||||.|||||||||...||...|||.|.||||    |.||.|.|    ||||||||.||||
Sbjct 1237  CCTTACAAGTGTAATGAGTGTGGCAAGACCTTCGGTCAGACATCA----TCGCTTATAATCCATCGTAGGCTTC  1306

Query 1295  ATACTGGAGAGAAACCTTACAAGTGTAATGAATGTGGCAAGGTTTTTAATCGAAAATCAAACCTTGAACGTCAT  1368
            |||||||||||||||||||||||||||||||.|||||||||...||.|.||..|..|||..|||||.|...|||
Sbjct 1307  ATACTGGAGAGAAACCTTACAAGTGTAATGAGTGTGGCAAGACCTTCAGTCAGATGTCATCCCTTGTATACCAT  1380

Query 1369  CATAGACTTCATACTGGAAAGAAATCT  1395
            |||||.|||||||.||||.||||..||
Sbjct 1381  CATAGGCTTCATAGTGGAGAGAAGCCT  1407

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