Nucleotide Global Alignment

Description

Query:
ccsbBroad304_08618
Subject:
NM_033583.3
Aligned Length:
2885
Identities:
2271
Gaps:
304

Alignment

Query    1  ATGGGGCCCAAGACACTC-CCACAGCTCGCTGGGAAATGGCAAGTGCTGTGCATGTTGTCCTTGTGCTGCTGGG  73
            |||.||||.|.|.|| || ||||||.|||||||||||||||||||||||||.||||||||||||||||||||.|
Sbjct    1  ATGAGGCCTATGGCA-TCACCACAGGTCGCTGGGAAATGGCAAGTGCTGTGTATGTTGTCCTTGTGCTGCTGTG  73

Query   74  GCTGGGTGTCTGGGCAGCTTCGTTACTCAGTGGTGGAGGAGTCTGAGCCGGGGACGCTGGTGGGGAATGTTGCT  147
            ||||||||||||||||||||||.||.|||||||||||||||||||||||||||||..||||||||||.||||||
Sbjct   74  GCTGGGTGTCTGGGCAGCTTCGGTATTCAGTGGTGGAGGAGTCTGAGCCGGGGACTTTGGTGGGGAACGTTGCT  147

Query  148  CAGGATCTGGGCTTAAAGATGACAGATCTGTTGAGCCGGCGGCTGCAACTGGGCTCTGAGGAGAATGGGCGCTA  221
            ||.|||||||||||||||..|||||||||.||||||||..|||||..|.|||||||||||||||||||||||||
Sbjct  148  CAAGATCTGGGCTTAAAGGGGACAGATCTATTGAGCCGCAGGCTGAGATTGGGCTCTGAGGAGAATGGGCGCTA  221

Query  222  TTTTTCCCTGAGCTTGATGAGTGGTGCCCTGGCAGTGAATCAAAAGATTGACCGAGAAAGCCTATGTGGAGCCA  295
            ||||||||||||.|||.||||.||.||..|||||||||.|||.||.|||||||||||.|||||.||.|||||||
Sbjct  222  TTTTTCCCTGAGTTTGGTGAGCGGAGCTTTGGCAGTGAGTCAGAAAATTGACCGAGAGAGCCTGTGCGGAGCCA  295

Query  296  GCACCAGCTGCCTGCTGCCAGTGCAGGTGGTGACTGAACACCCCCTGGAGCTAATCCGTGTAGAGGTAGAGATC  369
            ||||.||||||||||||||.||.||||||||.|||||||||||.||||||||.|.|||.|||||||||||||||
Sbjct  296  GCACTAGCTGCCTGCTGCCTGTACAGGTGGTAACTGAACACCCACTGGAGCTCACCCGGGTAGAGGTAGAGATC  369

Query  370  CTGGATCTCAATGACAACTCTCCTAGCTTTGCCACCCCTGAGCGAGAGATGCGCATCTCAGAATCAGCAGCATC  443
            |||||.|||||||||||||||||.|||||||||||.|||||.|||||||||||||||||.||||||||.|||.|
Sbjct  370  CTGGACCTCAATGACAACTCTCCCAGCTTTGCCACTCCTGATCGAGAGATGCGCATCTCGGAATCAGCTGCACC  443

Query  444  TGGGGCACGATTCCCACTGGACAGTGCCCAGGATCCGGATGTGGGCACCAATACTGTGAGCTTTTACACTCTAA  517
            |||.||..|.|||||||||||.||||||||.||.||.|||||||||||||||||||||||||||||.|||||.|
Sbjct  444  TGGAGCCAGGTTCCCACTGGATAGTGCCCAAGACCCAGATGTGGGCACCAATACTGTGAGCTTTTATACTCTCA  517

Query  518  GCCCCAACAGCCACTTCTCTCTGAATGTGAAGACCCTAAAAGATGGGAAGCCATTCCCAGAGCTGGTGCTAGAG  591
            |||||||||||||||||||||||.||||||||||||||||||||||.||||..|||||||||||.|||||||||
Sbjct  518  GCCCCAACAGCCACTTCTCTCTGCATGTGAAGACCCTAAAAGATGGAAAGCTCTTCCCAGAGCTAGTGCTAGAG  591

Query  592  CAGCAGCTGGATCGTGAAGCCCAGGCAAGACATCAGCTGGTGCTTACTGCTGTGGATGGGGGGACCCCAGCCCG  665
            ||.|||||.||.|||||..|||||||||||||||||||.||.||.|||||.|||||||||||.|||||||||||
Sbjct  592  CAACAGCTAGACCGTGAGACCCAGGCAAGACATCAGCTAGTACTCACTGCCGTGGATGGGGGAACCCCAGCCCG  665

Query  666  CTCAGGGACCACCCTTATCTCTGTCATCGTGCTGGACATCAATGATAATGCTCCAACCTTCCAATCCTCAGTTC  739
            |||||||||||.|||||||||.|||||.|||||||||.|||||||||||||.|||||||||||.|||||.||||
Sbjct  666  CTCAGGGACCAGCCTTATCTCGGTCATTGTGCTGGACGTCAATGATAATGCCCCAACCTTCCAGTCCTCGGTTC  739

Query  740  TACGTGTGGGAATCCCAGAGAATGCACCCATTGGTACTCTGCTGCTCCGCCTCAATGCCACTGATCCAGACGAG  813
            |||||||||||.||||||||||..|||||...|||||.|||||||||||.||||||||||||||||||||||||
Sbjct  740  TACGTGTGGGACTCCCAGAGAACACACCCCCGGGTACACTGCTGCTCCGTCTCAATGCCACTGATCCAGACGAG  813

Query  814  GGCACCAACGGCCAACTAGACTATTCTTTTGGAGACCACACATCTGAGGCAGTGCGGAACCTCTTTGGCCTAGA  887
            ||||||||.||||||||||||||.||||||||||||||.||||||||..|||||..|||.|||||||||||.||
Sbjct  814  GGCACCAATGGCCAACTAGACTACTCTTTTGGAGACCATACATCTGAAACAGTGAAGAATCTCTTTGGCCTGGA  887

Query  888  CCCTAGCAGTGGGGCAATCCATGTGTTGGGTCCCATAGACTTTGAGGAGTCACGTTTCTATGAAATTCATGCAA  961
            .|||||||||||.||||||||||||||||||||..||||.||||||||.|||..||||||||||||||||||||
Sbjct  888  TCCTAGCAGTGGAGCAATCCATGTGTTGGGTCCAGTAGATTTTGAGGAATCAAATTTCTATGAAATTCATGCAA  961

Query  962  GAGCCCGTGACCAGGGACAGCCTGCCATGGAGGGCCACTGTGTGATTCAAGTGGATGTGGGGGATGTCAATGAC  1035
            ||||.||.||||||||||||||.||||||||||||||||||||.||||||||.|||||.|||||||..||.|||
Sbjct  962  GAGCTCGAGACCAGGGACAGCCAGCCATGGAGGGCCACTGTGTAATTCAAGTAGATGTAGGGGATGCTAACGAC  1035

Query 1036  AATGCCCCAGAGGTGCTATTGGCCTCTTTGGCCAACCCTGTCCTAGAGAGCACACCAGTGGGCACAGTAGTGGG  1109
            ||..||||.||.|||||..||||.|||||||.|||||||||.||||||||||||||.||.|||||.||.|||||
Sbjct 1036  AACCCCCCTGAAGTGCTGCTGGCATCTTTGGTCAACCCTGTGCTAGAGAGCACACCCGTAGGCACGGTTGTGGG  1109

Query 1110  GTTGTTTAATGTGCGAGACCGGGACTCAGGTAGAAATGGTGAAGTGAGCCTTGATATCTCTCCGGACCTGCCAT  1183
            |||||||||||||||.|||||.||||||||||||||||||||.||||||||..|.|..|||||..|||||||||
Sbjct 1110  GTTGTTTAATGTGCGGGACCGAGACTCAGGTAGAAATGGTGAGGTGAGCCTGAAGACATCTCCAAACCTGCCAT  1183

Query 1184  TTCAGATTAAGCCTTCTGAGAACCACTACTCGCTGCTAACCAGCCAGCCTTTGGACCGGGAGGCCACATCCCAC  1257
            |||||||.|||||||||||||||||||||||.|||||.||||||||||||.|||||||.||||||||||||||.
Sbjct 1184  TTCAGATCAAGCCTTCTGAGAACCACTACTCACTGCTCACCAGCCAGCCTCTGGACCGAGAGGCCACATCCCAT  1257

Query 1258  TATATCATCGAGCTGCTGGCCAGCGATGCTGGTTCACCTTCCCTACACAAACATCTCACCATCAGGCTCAACAT  1331
            ||||.||||||||||||||||||.||||||||.|||||..|||||||.|..|||||||||.|||||||.|||||
Sbjct 1258  TATACCATCGAGCTGCTGGCCAGTGATGCTGGATCACCCCCCCTACATACCCATCTCACCCTCAGGCTGAACAT  1331

Query 1332  TTCAGATGTCAATGACAATGCACCCCGCTTCAACCAGCAGCTTTACACTGCTTACATCCTAGAAAACCGGCCTC  1405
            ||||||.||.|||||.||.|||||||..||||.|||.|||||.|||||||||||.||||.|||||||||.||.|
Sbjct 1332  TTCAGACGTTAATGATAACGCACCCCATTTCACCCAACAGCTCTACACTGCTTATATCCCAGAAAACCGCCCAC  1405

Query 1406  CGGGCTCCCTTCTTTGCACTGTGGCTGCCTCAGATCCAGACACTGGGGATAATGCCCGCCTCACCTACTCCATT  1479
            |.|||||.||.||.||.||||||||||||||.|||||||||...|||||||||||||||||||||||.||.|||
Sbjct 1406  CAGGCTCTCTCCTCTGTACTGTGGCTGCCTCTGATCCAGACGAGGGGGATAATGCCCGCCTCACCTATTCTATT  1479

Query 1480  GTAGGAAATCAGGTTCAGGGAGCCCCAGCCTCCTCCTTTGTGTATGTCAACCCAGAGGATGGACGGATCTTTGC  1553
            ||.||.|.|||..|.||||||||||||||||||||||||||||||||||||||.|||||||||||.||||||||
Sbjct 1480  GTGGGGAGTCAAATCCAGGGAGCCCCAGCCTCCTCCTTTGTGTATGTCAACCCCGAGGATGGACGAATCTTTGC  1553

Query 1554  CCAGCGTACCTTTGACTATGAATTGCTGCAGATGCTGCAGATTGTGGTGGGGGTTCGAGACTCCGGCTCTCCCC  1627
            ||||||.||||||||||||||.||.||||||||||||||.||.|||||||||||.||.||.|||||||||||||
Sbjct 1554  CCAGCGGACCTTTGACTATGAGTTACTGCAGATGCTGCAAATCGTGGTGGGGGTCCGTGATTCCGGCTCTCCCC  1627

Query 1628  CATTGCATGCCAACACATCTCTGCATGTGTTTGTCCTAGACGAGAATGATAATGCCCCAGCTGTGCTGCACCCA  1701
            .|.|||||||.|||||||||||.||||||||||||||.||..||||||||||||||||||||||||||||||||
Sbjct 1628  GACTGCATGCTAACACATCTCTCCATGTGTTTGTCCTCGATCAGAATGATAATGCCCCAGCTGTGCTGCACCCA  1701

Query 1702  CGGCCAGGCTGGGAACACTCAGCCCCCCAGCGTCTCCCTCGCTCTGCTCCTCCTGGCTCCTTGGTCACCAAGGT  1775
            ||.||.|||.||||...|||||||||.|||||||||||.||.||||||||||||||.||.||||||||||||||
Sbjct 1702  CGACCTGGCAGGGAGTTCTCAGCCCCTCAGCGTCTCCCCCGATCTGCTCCTCCTGGTTCTTTGGTCACCAAGGT  1775

Query 1776  GACAGCCGTGGATGCTGATGCAGGCCACAATGCGTGGCTCTCCTACTCACTGTTGCCACAGTCCACAGCCCCAG  1849
            ||||||||||||||||||.||.||.||||||||.||||||||.|||||.||.||.|||||||||||||||||.|
Sbjct 1776  GACAGCCGTGGATGCTGACGCTGGTCACAATGCATGGCTCTCTTACTCTCTCTTACCACAGTCCACAGCCCCCG  1849

Query 1850  GACTGTTCCTCGTGTCTACACACACTGGTGAGGTGCGCACAGCCCGGGCCTTACTGGAGGATGACTCTGACACC  1923
            ||||||||||.||.|||.|||||||||||||||||||||||||||||||||||.||||||||||||||||.|||
Sbjct 1850  GACTGTTCCTTGTATCTGCACACACTGGTGAGGTGCGCACAGCCCGGGCCTTATTGGAGGATGACTCTGATACC  1923

Query 1924  CAGCAGGTGGTGGTCCTGGTGAGGGACAATGGTGACCCTTCACTCTCCTCCACAGCCACAGTGCTGCTGGTTCT  1997
            ||.|||||||||||||||||||||||.|||||||||||||||||.|||||||||||.|||||.|||||||||||
Sbjct 1924  CAACAGGTGGTGGTCCTGGTGAGGGATAATGGTGACCCTTCACTATCCTCCACAGCAACAGTACTGCTGGTTCT  1997

Query 1998  GGAGGATGAGGACCCTGAGGAAATGCCCAAATCCAGTGACTTCCTCATACACCCTCCTGAGCGTTCAGACCTTA  2071
            ||||||.|||||..|.|||||||||||||||||||||||||||||||.|||||||||||||||.||||||||.|
Sbjct 1998  GGAGGACGAGGATGCAGAGGAAATGCCCAAATCCAGTGACTTCCTCACACACCCTCCTGAGCGGTCAGACCTCA  2071

Query 2072  CCCTTTACCTCATTGTGGCTCTAGCGACCGTCAGTCTCTTATCCCTAGTCACCTTCACCTTTC-TGTCAGCTAA  2144
            ||||||||||.||||||||.|||||..|.|||||||||||||||.||||.||||||| ||||| ||||||||||
Sbjct 2072  CCCTTTACCTTATTGTGGCACTAGCAGCTGTCAGTCTCTTATCCTTAGTTACCTTCA-CTTTCATGTCAGCTAA  2144

Query 2145  GTGCCTTCAGGGAAACGCAGACGGGGACGGGGGTGGAGGGCAGTGCTGCAGGCGCCAGGACTCACCCTCCCCGG  2218
            |||.||.|.|.|..|.|.|||.||||||.|||||||.||.||.|||||||||.|||||||||||||||||..||
Sbjct 2145  GTGTCTGCGGAGGCATGAAGATGGGGACCGGGGTGGGGGCCACTGCTGCAGGGGCCAGGACTCACCCTCCAGGG  2218

Query 2219  ACTTCTATAAGCAGTCCAGCCCCAACCTGCAGGTGAGCTCGGACGGCACGCTCAAGTACATGGAGGTGACGCTG  2292
            |.||||||||||||||||||||||||||.|||||||||||.||.|||||.||.|||||||||||||||||.|||
Sbjct 2219  AGTTCTATAAGCAGTCCAGCCCCAACCTCCAGGTGAGCTCAGATGGCACACTAAAGTACATGGAGGTGACCCTG  2292

Query 2293  CGGCCCACAGACTCGCAGAGCCACTGCTACAGGACGTGCTTTTCACCGGCCTCGGACGGCAGTGACTTCACTTT  2366
            ||||||||.|||||.||||||||.|||||||||||.||||||||.|||||||||||.|||||||||||||||||
Sbjct 2293  CGGCCCACGGACTCTCAGAGCCATTGCTACAGGACCTGCTTTTCTCCGGCCTCGGATGGCAGTGACTTCACTTT  2366

Query 2367  TCTAAGACCCCTCAGCGTTCAGCAGCCCACAGCTCTGGCGCTGGAGCCTGACGCCATCCGGTCCCGCTCTAATA  2440
            .||.||.|||||||||||||||||||||.||||..||||||||||.||.||.|||.|.||.||||||||||.||
Sbjct 2367  CCTCAGGCCCCTCAGCGTTCAGCAGCCCTCAGCCTTGGCGCTGGAACCCGAGGCCTTGCGTTCCCGCTCTAGTA  2440

Query 2441  CGCTGCGGGAGCGGAGCCAGGTGAGGGGCTC-GGCGCCGCCCCGGGCGACCCCTGGGGGCGGCACTGGAG----  2509
            ||||||||||||||||||||          | .||.||||||      |.|.|||        |||||.|    
Sbjct 2441  CGCTGCGGGAGCGGAGCCAG----------CAAGCCCCGCCC------AACACTG--------ACTGGCGTTTC  2490

Query 2510  ----AAGCC-----GCCCG-----------TCCTCATAA--GGGATTGAACTTGCATCCACTCCTCTCCGGCC-  2560
                |||||     .||||           ||| ||.||  |.|||..||||.|||      |||    |||| 
Sbjct 2491  TCTCAAGCCCAGAGACCCGGCACGAGCGGATCC-CAAAATGGTGATGAAACTGGCA------CCT----GGCCC  2553

Query 2561  ------------------------------------GGCTTGGTCGCTG--------GCTGC--------GCTC  2582
                                                ..|||||.|.|||        |||||        ||||
Sbjct 2554  AACAACCAGTTTGATACAGAGATGCTGCAAGCCATGATCTTGGCCTCTGCCAGCGAAGCTGCTGATGGGAGCTC  2627

Query 2583  CACCCGATTCTCGGGATCATTGGACCGTTTGCGC-GGAACCA-------GAGTGGCCGAT--------------  2634
            .||||      .||||          |...|||| ||.||||       |||.|..||||              
Sbjct 2628  TACCC------TGGGA----------GGGGGCGCTGGCACCATGGGTCTGAGCGCTCGATACGGACCCCAGTTT  2685

Query 2635  --------------------------------------------------------------------------  2634
                                                                                      
Sbjct 2686  ACCCTGCAGCACGTGCCTGACTACCGCCAGAACGTGTACATCCCTGGCAGCAATGCCACGCTGACCAATGCCGC  2759

Query 2635  -------------------------------------------------------------------------  2634
                                                                                     
Sbjct 2760  TGGCAAACGAGATGGCAAGGCTCCAGCAGGTGGTAATGGCAACAAGAAGAAATCGGGCAAGAAAGAGAAGAAG  2832

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