Nucleotide Global Alignment

Description

Query:
ccsbBroad304_08707
Subject:
XM_006499510.3
Aligned Length:
2210
Identities:
1246
Gaps:
841

Alignment

Query    1  ---------------------------------------------------ATGTTTGGGAAGAAAAAGAAAAA  23
                                                               |||||||||||||||||||||||
Sbjct    1  ATGAGGTACCGCGACTTCTCTGCTGACAGCCAGCCACCAGGTTTTTACATCATGTTTGGGAAGAAAAAGAAAAA  74

Query   24  GATTGAAATATCTGGCCCGTCCAACTTTGAACACAGGGTTCATACTGGGTTTGATGCACAAGAGCAGAAGTTTA  97
            |||.||||||||||||||.|||||||||||||||||||||||||||||.||||||.||||||||||||||||||
Sbjct   75  GATCGAAATATCTGGCCCATCCAACTTTGAACACAGGGTTCATACTGGATTTGATCCACAAGAGCAGAAGTTTA  148

Query   98  CCGGCCTTCCCCAGCAGTGGCACAGCCTGTTAGCAGATACGGCCAACAGGCCAAAGCCTATGGTGGACCCTTCA  171
            |.|||||||||||||||||||||||||||||||||||.||.|||||||||||.|||||.|||||||||||.|||
Sbjct  149  CTGGCCTTCCCCAGCAGTGGCACAGCCTGTTAGCAGACACAGCCAACAGGCCCAAGCCCATGGTGGACCCATCA  222

Query  172  TGCATCACACCCATCCAGCTGGCTCCTATGAAGACAATCGTTAGAGGAAACAAACCCTGCAAGGAAACCTCCAT  245
            ||||||||||||||.|||||||||||.|||                                            
Sbjct  223  TGCATCACACCCATACAGCTGGCTCCCATG--------------------------------------------  252

Query  246  CAACGGCCTGCTAGAGGATTTTGACAACATCTCGGTGACTCGCTCCAACTCCCTAAGGAAAGAAAGCCCACCCA  319
                                                                                      
Sbjct  253  --------------------------------------------------------------------------  252

Query  320  CCCCAGATCAGGGAGCCTCCAGCCACGGTCCAGGCCACGCGGAAGAAAATGGCTTCATCACCTTCTCCCAGTAT  393
                                                                                      
Sbjct  253  --------------------------------------------------------------------------  252

Query  394  TCCAGCGAATCCGATACTACTGCTGACTACACGACCGAAAAGTACAGGGAGAAGAGTCTCTATGGAGATGATCT  467
                                                                                      
Sbjct  253  --------------------------------------------------------------------------  252

Query  468  GGATCCGTATTATAGAGGCAGCCACGCAGCCAAGCAAAATGGGCACGTAATGAAAATGAAGCACGGGGAGGCCT  541
                                                                                      
Sbjct  253  --------------------------------------------------------------------------  252

Query  542  ACTATTCTGAGGTGAAGCCTTTGAAATCCGATTTTGCCAGATTTTCTGCCGATTATCACTCACATTTGGACTCA  615
                                                                                      
Sbjct  253  --------------------------------------------------------------------------  252

Query  616  CTGAGCAAACCAAGTGAATACAGTGACCTCAAGTGGGAGTATCAGAGAGCCTCGAGTAGCTCCCCTCTGGATTA  689
                                                                                      
Sbjct  253  --------------------------------------------------------------------------  252

Query  690  TTCATTCCAATTCACACCTTCTAGAACTGCAGGGACCAGCGGGTGCTCCAAGGAGAGCCTGGCGTACAGTGAAA  763
                                                                                      
Sbjct  253  --------------------------------------------------------------------------  252

Query  764  GTGAATGGGGACCCAGCCTGGATGACTATGACAGGAGGCCAAAGTCTTCGTACCTGAATCAGACAAGCCCTCAG  837
                                                                                      
Sbjct  253  --------------------------------------------------------------------------  252

Query  838  CCCACCATGCGGCAGAGGTCCAGGTCAGGCTCGGGACTCCAGGAACCGATGATGCCATTTGGAGCAAGTGCATT  911
                                                                                      
Sbjct  253  --------------------------------------------------------------------------  252

Query  912  TAAAACCCATCCCCAAGGACACTCCTACAACTCCTACACCTACCCTCGCTTGTCCGAGCCCACAATGTGCATTC  985
                                                                                      
Sbjct  253  --------------------------------------------------------------------------  252

Query  986  CAAAGGTGGATTACGATCGAGCACAGATGGTCCTCAGCCCTCCACTGTCAGGGTCTGACACCTACCCCAGGGGC  1059
              ||||||||||||||||||||||||||||||.||||.|||||||||||||||||.|||||.||||||||.|||
Sbjct  253  --AAGGTGGATTACGATCGAGCACAGATGGTCTTCAGTCCTCCACTGTCAGGGTCCGACACTTACCCCAGAGGC  324

Query 1060  CCTGCCAAACTACCTCAAAGTCAAAGCAAATCGGGCTATTCCTCAAGCAGTCACCAGTACCCGTCTGGGTACCA  1133
            ||..||||||||||||||||||||||||||.|.|||||.||.|||.||||.|||||||||||.|||||||||||
Sbjct  325  CCCACCAAACTACCTCAAAGTCAAAGCAAAGCAGGCTACTCTTCAGGCAGCCACCAGTACCCTTCTGGGTACCA  398

Query 1134  CAAAGCCACCT-TGTACCATCACCCCTCCCTGCAGAGCAGTTCGCAGTACATCTCCACGGCTTCCTACCTGAGC  1206
            ||||| ||.|| |.|||||.||.||.||||||||.|.||||||.||||||||||||||.|||||.|||.|.|||
Sbjct  399  CAAAG-CATCTCTATACCACCATCCATCCCTGCAAACCAGTTCTCAGTACATCTCCACCGCTTCTTACTTAAGC  471

Query 1207  TACCTCAGCCTCTCATCCAGCACCTACCCGCCGCCCAGCTGGGGCTCCTCCTCCGACCAGCAGCCCTCCAGGGT  1280
            |..|||||..||||.||.|||||||||||.||.||.|||||||||||||||||.||||||||||||||.|||||
Sbjct  472  TCTCTCAGTATCTCCTCGAGCACCTACCCTCCACCTAGCTGGGGCTCCTCCTCAGACCAGCAGCCCTCAAGGGT  545

Query 1281  GTCCCATGAACAGTTTCGGGCGGCCCTGCAGCTGGTGGTCAGCCCAGGAGACCCCAGGGAATACTTGGCCAACT  1354
            .|||||||||||.||.||.||.||||||||.||||||||||||||||||||||||||||||||.||||..||||
Sbjct  546  ATCCCATGAACAATTCCGAGCTGCCCTGCAACTGGTGGTCAGCCCAGGAGACCCCAGGGAATATTTGGATAACT  619

Query 1355  TTATCAAAATCGGGGAAGGCTCAACCGGCATCGTATGCATCGCCACCGAGAAACACACAGGGAAACAAGTTGCA  1428
            ||||.||||||||.|||||.||.||.||||||||.|||||.||.||.||||||||||||||.||.|||||.|||
Sbjct  620  TTATTAAAATCGGAGAAGGGTCGACAGGCATCGTGTGCATTGCAACAGAGAAACACACAGGCAAGCAAGTGGCA  693

Query 1429  GTGAAGAAAATGGACCTCCGGAAGCAACAGAGACGAGAACTGCTTTTCAATGAGGTCGTGATCATGCGGGATTA  1502
            ||||||||||||||||||||.|||||.||||||||.|||||.|||||.||||||||||||||.|||||.|||||
Sbjct  694  GTGAAGAAAATGGACCTCCGAAAGCAGCAGAGACGGGAACTCCTTTTTAATGAGGTCGTGATAATGCGTGATTA  767

Query 1503  CCACCATGACAATGTGGTTGACATGTACAGCAGCTACCTTGTCGGCGATGAGCTCTGGGTGGTCATGGAGTTTC  1576
            ||||||||||||.||.|||||||||||||.||||||||||||.||.||||||||||||||||||||||||||||
Sbjct  768  CCACCATGACAACGTAGTTGACATGTACAACAGCTACCTTGTTGGAGATGAGCTCTGGGTGGTCATGGAGTTTC  841

Query 1577  TAGAAGGTGGTGCCTTGACAGACATTGTGACTCACACCAGAATGAATGAAGAACAGATAGCTACTGTCTGCCTG  1650
            ||||||||||||||||||||||||||||.|||||.|||||||||||||||||.|||||||||||||||||||||
Sbjct  842  TAGAAGGTGGTGCCTTGACAGACATTGTCACTCATACCAGAATGAATGAAGAGCAGATAGCTACTGTCTGCCTG  915

Query 1651  TCAGTTCTGAGAGCTCTCTCCTACCTTCATAACCAAGGAGTGATTCACAGGGACATAAAAAGTGACTCCATCCT  1724
            ||||||||||.||||||.|||||||||||||||||||||||||||||||||||||||||.|||||||||||.||
Sbjct  916  TCAGTTCTGAAAGCTCTGTCCTACCTTCATAACCAAGGAGTGATTCACAGGGACATAAAGAGTGACTCCATTCT  989

Query 1725  CCTGACAAGCGATGGCCGGATAAAGTTGTCTGATTTTGGTTTCTGTGCTCAAGTTTCCAAAGAGGTGCCGAAGA  1798
            .||||||||||||||||||||||||||.|||||.|||||||||||||||||||||||||||||||||||.||||
Sbjct  990  TCTGACAAGCGATGGCCGGATAAAGTTATCTGACTTTGGTTTCTGTGCTCAAGTTTCCAAAGAGGTGCCAAAGA  1063

Query 1799  GGAAATCATTGGTTGGCACTCCCTACTGGATGGCCCCTGAGGTGATTTCTAGGCTACCTTATGGGACAGAGGTG  1872
            ||||.|||.||||.||.||.||.|||||||||||.||||||||||||||.||||||||||||||||||||||||
Sbjct 1064  GGAAGTCACTGGTGGGTACCCCATACTGGATGGCACCTGAGGTGATTTCCAGGCTACCTTATGGGACAGAGGTG  1137

Query 1873  GACATCTGGTCCCTCGGGATCATGGTGATAGAAATGATTGATGGCGAGCCCCCCTACTTCAATGAGCCTCCCCT  1946
            ||||||||||||||||||||.|||||||||||.|||||||||||.|||||||||||.||||||||||||||.||
Sbjct 1138  GACATCTGGTCCCTCGGGATAATGGTGATAGAGATGATTGATGGGGAGCCCCCCTATTTCAATGAGCCTCCTCT  1211

Query 1947  CCAGGCGATGCGGAGGATCCGGGACAGTTTACCTCCAAGAGTGAAGGACCTACACAAGGTTTCTTCAGTGCTCC  2020
            .|||||.|||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||..||||||
Sbjct 1212  GCAGGCCATGAGGAGGATCCGGGACAGTTTACCTCCAAGAGTGAAGGACCTACACAAGGTTTCTTCCATGCTCC  1285

Query 2021  GGGGATTCCTAGA-CTTGATGTTGGTGAGGGAGCCCTCTCAGAGAGCAACAGCCCAGGAACTCCTCGGACATCC  2093
            |.||||||||||| ||| |||||||||||||||||||||||.|||||.|||||.||.||||||||.||||||||
Sbjct 1286  GAGGATTCCTAGATCTT-ATGTTGGTGAGGGAGCCCTCTCAAAGAGCCACAGCTCAAGAACTCCTTGGACATCC  1358

Query 2094  ATTCTTAAAACTAGCAGGTCCACCGTCTTGCATTGTCCCCCTCATGAGACAATACAGGCATCAC  2157
            ||||||||||.|.|||||||||||.|||||||||||.||.|||||||||||||||||.||||||
Sbjct 1359  ATTCTTAAAATTGGCAGGTCCACCATCTTGCATTGTTCCTCTCATGAGACAATACAGACATCAC  1422

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