Nucleotide Global Alignment

Description

Query:
ccsbBroad304_08908
Subject:
XM_017321114.1
Aligned Length:
1640
Identities:
1254
Gaps:
184

Alignment

Query    1  ATGGAGGAAATACCAGCCCAGGAAGCAGCAGGGTCACCAAGGGTCCAGTTTCAGTCTTTGGAGACCCAGTCTGA  74
            ||||||||..||.||.||||.|||||.||||.||||||.||||.|||.||.|||.|||||||||.|||||||||
Sbjct    1  ATGGAGGAGGTAACATCCCAAGAAGCCGCAGAGTCACCCAGGGGCCACTTCCAGCCTTTGGAGAACCAGTCTGA  74

Query   75  GTGTCTGTCCCCAGAGCCTCAGTTTGTGCAGGACACCGACATGGAACAGGGACTCACTGGG-------------  135
            .|||||.||||||||||.||.||||.||||||||||.||||||||.||||||.|||.||||             
Sbjct   75  ATGTCTTTCCCCAGAGCTTCGGTTTCTGCAGGACACGGACATGGAGCAGGGATTCAGTGGGGGATTTCCAATTT  148

Query  136  --------------------------------------------------------------------------  135
                                                                                      
Sbjct  149  CGAAGCCTGATGGAATCTCTGAGCGGGAGCAAGATCTACAAGTCTTTGATCTGGAGTCTAAGAATAGAGAAGTC  222

Query  136  ------------------GATGGAGAGACCAGAGAAGATAACAAGCTGTTGATTCCTAAGCAGAAAATTTCGGA  191
                              ||||||||||||||||||||.||||||||||||||||||||||.|||||||||.||
Sbjct  223  ATAAGAGGTGACTGTTCAGATGGAGAGACCAGAGAAGAAAACAAGCTGTTGATTCCTAAGCGGAAAATTTCAGA  296

Query  192  AGAAGTGCATTCATACAAAGTGAGAGTAGGAAGACTCAAACACGATATTACCCAAGTTCCTGAGACTAGAGAAG  265
            ||||||.|||||||||||||||||||||||||.|.|||||||.||||||.|.|||||||||||.||.|||||.|
Sbjct  297  AGAAGTACATTCATACAAAGTGAGAGTAGGAAAATTCAAACAAGATATTGCTCAAGTTCCTGAAACCAGAGAGG  370

Query  266  TGTATAAGTCTGAGGACAGATTAGAAAGACTTCAGGAAATTCTAAGGAAATTTCTGTACCTGGAGAGAGAGTTT  339
            |.|||||||||||||||||||||||||||||.|||||.||||||||.||||||||.|..|||||||||||||||
Sbjct  371  TTTATAAGTCTGAGGACAGATTAGAAAGACTCCAGGAGATTCTAAGAAAATTTCTCTTTCTGGAGAGAGAGTTT  444

Query  340  AGGCAAATAACAATCAGCAAGGAAACCTTCACCAGTGAGAAGAACAATGAATGTCATGAACCCGAAAAAAGCTT  413
            ||.||||||||||||||||||.|.||.||||.||||||||||||||         .||||||.|||||||||||
Sbjct  445  AGACAAATAACAATCAGCAAGAAGACTTTCAGCAGTGAGAAGAACA---------CTGAACCTGAAAAAAGCTT  509

Query  414  CAGTCTGGACTCTACTATTGATGCAGATCAGAGAGTTCTTAGAATACAGAATACCGATGACAATGATAAGTATG  487
            ||||||.|||||.||..|||||.|||||||||||||||||||||||||||..||.|||||||   .|||.||||
Sbjct  510  CAGTCTAGACTCCACACTTGATACAGATCAGAGAGTTCTTAGAATACAGACCACTGATGACA---GTAAATATG  580

Query  488  ACATGAGCTTCAACCAGAATTCAGCCTCTGGTAAACATGAACACTTAAATCTAACAGAGGATTTTCAGAGTAGT  561
            ||||||.||||||||||||..||||...||||.||||.||||...||||||||||||||.||||||||||||.|
Sbjct  581  ACATGAACTTCAACCAGAACCCAGCAGTTGGTGAACAAGAACCAATAAATCTAACAGAGAATTTTCAGAGTACT  654

Query  562  GAATGTAAGGAAAGCTTAATGGATCTCTCCCACCTTAATAAATGGGAGAGCATCCCTAACACTGAGAAATCCTA  635
            ||.|.|||||||||||||||||||||.||||||||||||||.|||||||||||.||||.|||.||.|.||||||
Sbjct  655  GACTATAAGGAAAGCTTAATGGATCTGTCCCACCTTAATAAGTGGGAGAGCATGCCTACCACCGACAGATCCTA  728

Query  636  TAAATGTGATGTATGTGGGAAAATTTTCCATCAGAGCTCAGCCCTTACTAGACATCAGAGAATCCATACTAGAG  709
            ||||||||||...||||||||||..|||||||||..||||||.||||||||||||||||||||.||.||.||||
Sbjct  729  TAAATGTGATACTTGTGGGAAAACCTTCCATCAGGCCTCAGCTCTTACTAGACATCAGAGAATTCACACAAGAG  802

Query  710  AGAAGCCCTACAAATGTAAAGAATGTGAAAAGTCTTTCAGTCAGAGCTCAAGTCTTAGTCGACATAAAAGAATA  783
            ||||.||||||||||||||.||||||||.||.||||||||||||||||||||||||||||||||.|||||||||
Sbjct  803  AGAAACCCTACAAATGTAAGGAATGTGAGAAATCTTTCAGTCAGAGCTCAAGTCTTAGTCGACACAAAAGAATA  876

Query  784  CACACTAGAGAAAAACCTTACAAATGTGAAGCATCTGATAAATCCTGTGAAGCGTCTGATAAATCCTGTAGTCC  857
            |||||.|||||.|||.|.||||||||||||||.||||||||.||||||||.||..|||||||.||.||||| ||
Sbjct  877  CACACCAGAGAGAAATCCTACAAATGTGAAGCGTCTGATAAGTCCTGTGATGCACCTGATAAGTCTTGTAG-CC  949

Query  858  A-AGCTCAG----GCATAATTCAGCATAAGAAAATTCACACCAGAGCCAAATCTTACAAATGTAGCAGTTGTGA  926
            | |||||||    ||    ||||.||||||||...|||..|||.||||||.||||||||.|||.|.|..|||||
Sbjct  950  AGAGCTCAGATGTGC----TTCAACATAAGAAGGGTCATGCCAAAGCCAAGTCTTACAAGTGTGGAACCTGTGA  1019

Query  927  AAGAGTCTTCAGTCGTAGTGTCCACCTTACTCAACATCAGAAAATTCACAAAGAGATGCCCTGTAAGTGTACTG  1000
            ||||||||||||.||.|||||.||.||||||||.|||||||.||..||.||.||.|||.|||||||.|||||.|
Sbjct 1020  AAGAGTCTTCAGCCGAAGTGTGCATCTTACTCAGCATCAGAGAACACATAAGGACATGTCCTGTAAATGTACCG  1093

Query 1001  TATGTGGCAGTGACTTCTGCCATACTTCATACCTACTTGAACATCAGAGGGTCCATCATGAAGAGAAAGCCTAT  1074
            |.||||||||||||||||||||.||.||||||.||.|||||||||||||..|.||||||.|||||||..|||||
Sbjct 1094  TGTGTGGCAGTGACTTCTGCCACACCTCATACTTAGTTGAACATCAGAGACTACATCATCAAGAGAAGTCCTAT  1167

Query 1075  GAGTATGATGAATATGGGTTGGCCTATATTAAACAACAAGGAATTCATTTCAGAGAAAAGCCCTATACGTGTAG  1148
            ||.||||||||||.||||.||||||||.||||||||||||||||||.||||..||||||||||||..|.||||.
Sbjct 1168  GAATATGATGAATGTGGGCTGGCCTATGTTAAACAACAAGGAATTCGTTTCCAAGAAAAGCCCTACTCATGTAA  1241

Query 1149  TGAATGTGGAAAAGACTTCAGATTGAATTCACATCTTATTCAGCATCAAAGAATTCACACAGGAGAGAAAGCAC  1222
            .||||||||.||||||||.|||||||||||.|||||||||||||||||||||||||||||||||||||||...|
Sbjct 1242  CGAATGTGGGAAAGACTTTAGATTGAATTCCCATCTTATTCAGCATCAAAGAATTCACACAGGAGAGAAACTGC  1315

Query 1223  ATGAATGTAATGAATGTGGAAAAGCTTTCAGTCAAACCTCATGCCTTATTCAGCATCACAAAATGCATAGGAAA  1296
            |||||||||||||.|||||.|||.|||||||.|||||||||||||||||||||||||||||||||||.||||||
Sbjct 1316  ATGAATGTAATGAGTGTGGGAAATCTTTCAGCCAAACCTCATGCCTTATTCAGCATCACAAAATGCACAGGAAA  1389

Query 1297  GAGAAATCGTATGAATGTAATGAGTATGAGGGCAGTTTCAGTCATAGCTCAGATCTTATCCTGCAACAAGAAGT  1370
            ||||||||.||.||||..||..|.|||||||..|||||||||||.||.||.|||||||..||||||||||||||
Sbjct 1390  GAGAAATCATACGAATACAACAATTATGAGGAAAGTTTCAGTCACAGTTCTGATCTTACTCTGCAACAAGAAGT  1463

Query 1371  CCTCACCAGACAGAAAGCCTTTGATTGTGATGTATGGGAAAAGAACTCCAGTCAGAGAGCACATCTAGTTCAAC  1444
            .|.||..|||.|||.||.||||||||||||||.|||||||.||||||.|||||||||||||||.||..|.||||
Sbjct 1464  TCCCATTAGAGAGAGAGTCTTTGATTGTGATGCATGGGAAGAGAACTTCAGTCAGAGAGCACACCTCATCCAAC  1537

Query 1445  ATCAGAGCATTCATACCAAAGAGAA--CTCA-------------------------------------------  1473
            ||.|.||..|.||||||||||||||  ||.|                                           
Sbjct 1538  ATGAAAGGGTCCATACCAAAGAGAAACCTTATGAATGCAGTGAACTTGGGGAGACATTTAGTCAAGTTCAGGCC  1611

Query 1474  ------------  1473
                        
Sbjct 1612  TCATTCAATATG  1623

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