Nucleotide Global Alignment

Description

Query:
ccsbBroad304_09099
Subject:
XR_921967.3
Aligned Length:
2401
Identities:
1854
Gaps:
544

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  AAAGCGGGCTGCGGCCCCCTCCCAAAACCCGGGGAAGTGGATTCTACTCTACGCTCCGCTCCGCTCCGCTCCGC  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  ACCACCAACCCCGGGCCGCAGTCCTGACGAGCGGGTCAGGGCTTGTCGGGCGGAAGCCTGGCCTGGAGCCTGGA  148

Query    1  ------------------------------------------------------------------ATGTTTGT  8
                                                                              ||||||||
Sbjct  149  AGGGGGAGACGGCCCGAGCGGGAGCGGGAGCGGACGCGGCCTCAGTCCTGCGCGGAATATTGAAGGATGTTTGT  222

Query    9  TCCAAGATCTCTAAAAATCAAGAGGAATGCTAATGATGATGGCAAAAGTTGTGTGGCTAAGATAATTAAACCAG  82
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  TCCAAGATCTCTAAAAATCAAGAGGAATGCTAATGATGATGGCAAAAGTTGTGTGGCTAAGATAATTAAACCAG  296

Query   83  ACCCAGAAGACCTTCAGTTGGACAAAAGCAGAGATGTTCCCGTTGATGCTGTAGCTACAGAAGCAGCCACAATA  156
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  ACCCAGAAGACCTTCAGTTGGACAAAAGCAGAGATGTTCCCGTTGATGCTGTAGCTACAGAAGCAGCCACAATA  370

Query  157  GACAGGCACATCAGCGAATCATGCCCTTTCCCCAGCCCAGGTGGCCAGTTGGCAGAGGTTCATTCAGTAAGTCC  230
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  GACAGGCACATCAGCGAATCATGCCCTTTCCCCAGCCCAGGTGGCCAGTTGGCAGAGGTTCATTCAGTAAGTCC  444

Query  231  CGAGCAGGGTGCGAAGGACAGCCATCCTTCTGAAGAGCCCGTTAAGTCATTTTCCAAAACACAGCGCTGGGCAG  304
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  CGAGCAGGGTGCGAAGGACAGCCATCCTTCTGAAGAGCCCGTTAAGTCATTTTCCAAAACACAGCGCTGGGCAG  518

Query  305  AACCAGGGGAACCCATCTGTGTTGTCTGTGGTCGTTATGGAGAGTATATCTGTGATAAGACAGATGAAGATGTG  378
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  AACCAGGGGAACCCATCTGTGTTGTCTGTGGTCGTTATGGAGAGTATATCTGTGATAAGACAGATGAAGATGTG  592

Query  379  TGTAGTTTGGAGTGTAAAGCGAAACATCTTCTACAAGTTAAGGAAAAGGAAGAGAAATCAAAACTCAGCAATCC  452
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  TGTAGTTTGGAGTGTAAAGCGAAACATCTTCTACAAGTTAAGGAAAAGGAAGAGAAATCAAAACTCAGCAATCC  666

Query  453  ACAGAAGGCTGATTCTGAGCCAGAGTCTCCACTGAATGCTTCCTATGTCTACAAAGAGCACCCCTTTATTTTGA  526
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  ACAGAAGGCTGATTCTGAGCCAGAGTCTCCACTGAATGCTTCCTATGTCTACAAAGAGCACCCCTTTATTTTGA  740

Query  527  ACCTTCAGGAAGACCAGATTGAAAATCTTAAACAGCAGCTGGGAATTTTAGTTCAAGGGCAAGAAGTCACCAGG  600
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  ACCTTCAGGAAGACCAGATTGAAAATCTTAAACAGCAGCTGGGAATTTTAGTTCAAGGGCAAGAAGTCACCAGG  814

Query  601  CCCATTATTGACTTTGAACATTGTAGTCTCCCTGAGGTCTTAAATCACAACTTGAAGAAATCGGGCTATGAGGT  674
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||
Sbjct  815  CCCATTATTGACTTTGAACATTGTAGTCTCCCTGAGGTCTTAAATCACAACTTGAAGAAATCAGGCTATGAGGT  888

Query  675  GCCAACTCCCATTCAAATGCAGATGATTCCTGTGGGACTTCTGGGAAGAGACATTCTGGCCAGTGCAGATACTG  748
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  889  GCCAACTCCCATTCAAATGCAGATGATTCCTGTGGGACTTCTGGGAAGAGACATTCTGGCCAGTGCAGATACTG  962

Query  749  GCTCAGGAAAAACAGCTGCTTTTCTTCTTCCTGTTATCATGCGAGCTTTATTCGAGAGCAAAACTCCATCTGCG  822
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  963  GCTCAGGAAAAACAGCTGCTTTTCTTCTTCCTGTTATCATGCGAGCTTTATTCGAGAGCAAAACTCCATCTGCG  1036

Query  823  CTCATTCTTACACCAACCAGAGAGTTAGCCATTCAGATAGAGAGACAAGCTAAAGAATTGATGAGTGGCCTGCC  896
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037  CTCATTCTTACACCAACCAGAGAGTTAGCCATTCAGATAGAGAGACAAGCTAAAGAATTGATGAGTGGCCTGCC  1110

Query  897  ACGCATGAAAACTGTGCTTCTTGTAGGGGGCTTACCCTTACCCCCACAGCTTTATCGTCTGCAACAACATGTTA  970
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111  ACGCATGAAAACTGTGCTTCTTGTAGGGGGCTTACCCTTACCCCCACAGCTTTATCGTCTGCAACAACATGTTA  1184

Query  971  AGGTTATCATAGCAACCCCTGGGCGACTTCTGGATATAATAAAGCAGAGCTCTGTAGAACTCTGTGGTGTAAAG  1044
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185  AGGTTATCATAGCAACCCCTGGGCGACTTCTGGATATAATAAAGCAGAGCTCTGTAGAACTCTGTGGTGTAAAG  1258

Query 1045  ATTGTGGTAGTAGATGAA--------------------------------------------------------  1062
            ||||||||||||||||||                                                        
Sbjct 1259  ATTGTGGTAGTAGATGAAGAGTCACCTGGCTTGCTTAGTGACCATCAGACGAGACCAGACCTCTCACTTGGATA  1332

Query 1063  ------------------------------------------------------GCTGATACCATGTTAAAGAT  1082
                                                                  ||||||||||||||||||||
Sbjct 1333  TTCTGATTCAGTAGGTGTGAGTTGGAGCCAGGAATCTCTACAAACTCATTCCAGGCTGATACCATGTTAAAGAT  1406

Query 1083  GGGTTTTCAACAACAAGTGCTTGACATTTTGGAAAACATTCCTAATGATTGTCAGACCATTTTGGTTTCAGCCA  1156
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407  GGGTTTTCAACAACAAGTGCTTGACATTTTGGAAAACATTCCTAATGATTGTCAGACCATTTTGGTTTCAGCCA  1480

Query 1157  CAATTCCAACTAGCATAGAACAGCTAGCAAGCCAGCTTCTGCATAATCCTGTGAGAATTATCACTGGAGAAAAG  1230
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481  CAATTCCAACTAGCATAGAACAGCTAGCAAGCCAGCTTCTGCATAATCCTGTGAGAATTATCACTGGAGAAAAG  1554

Query 1231  AACCTACCTTGTGCCAATGTACGTCAGATTATTTTGTGGGTAGAAGACCCAGCCAAAAAGAAAAAATTATTTGA  1304
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555  AACCTACCTTGTGCCAATGTACGTCAGATTATTTTGTGGGTAGAAGACCCAGCCAAAAAGAAAAAATTATTTGA  1628

Query 1305  AATTTTAAATGATAAGAAACTCTTTAAGCCTCCAGTGTTAGTATTTGTGGACTGCAAACTAGGAGCAGATCTTT  1378
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629  AATTTTAAATGATAAGAAACTCTTTAAGCCTCCAGTGTTAGTATTTGTGGACTGCAAACTAGGAGCAGATCTTT  1702

Query 1379  TGAGTGAAGCCGTTCAGAAAATCACAGGGCTGAAAAGAATATCTATACATTCGGAGAAGTCGCAAATAGAAAGG  1452
            |||||||||||||||||||||||||||||||||||||.||||||||||||||.|||||||||||||||||||||
Sbjct 1703  TGAGTGAAGCCGTTCAGAAAATCACAGGGCTGAAAAGCATATCTATACATTCAGAGAAGTCGCAAATAGAAAGG  1776

Query 1453  AAAAACATATTGAAGGGATTACTTGAAGGAGACTATGAAGTTGTAGTGAGCACAGGAGTCTTGGGACGAGGCCT  1526
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1777  AAAAACATATTGAAGGGATTACTTGAAGGAGACTATGAAGTTGTAGTGAGCACAGGAGTCTTGGGACGAGGCCT  1850

Query 1527  AGACTTGATCAGTGTCAGGCTGGTTGTCAATTTTGATATGCCTTCAAGTATGGATGAGTATGTCCATCAGATTG  1600
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1851  AGACTTGATCAGTGTCAGGCTGGTTGTCAATTTTGATATGCCTTCAAGTATGGATGAGTATGTCCATCAGATTG  1924

Query 1601  GAAGAGTAGGAAGATTAGGTCAAAATGGAACAGCGATTACTTTCATCAATAATAATTCAAAAAGACTCTTCTGG  1674
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1925  GAAGAGTAGGAAGATTAGGTCAAAATGGAACAGCGATTACTTTCATCAATAATAATTCAAAAAGACTCTTCTGG  1998

Query 1675  GATATTGCAAAACGAGTAAAGCCCACAGGATCCATTCTTCCCCCTCAGTTATTAAATTCCCCATACCTTCATGA  1748
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1999  GATATTGCAAAACGAGTAAAGCCCACAGGATCCATTCTTCCCCCTCAGTTATTAAATTCCCCATACCTTCATGA  2072

Query 1749  CCAGAAGAGAAAGGAACAACAGAAAGATAAACAGACACAGAATGATCTGGTTACAGGAGCTAATCTTATGGATA  1822
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2073  CCAGAAGAGAAAGGAACAACAGAAAGATAAACAGACACAGAATGATCTGGTTACAGGAGCTAATCTTATGGATA  2146

Query 1823  TTATCAGAAAACATGATAAAAGTAATTCTCAGAAA---------------------------------------  1857
            |||||||||||||||||||||||||||||||||||                                       
Sbjct 2147  TTATCAGAAAACATGATAAAAGTAATTCTCAGAAATGATTTTCTCTGCCACTTGAATATTTTTTTTTATTGTAT  2220

Query 1858  --------------------------------------------------------------------------  1857
                                                                                      
Sbjct 2221  ATAGTCAGCAAAAAATTATGGTTTGCATAAATGGAAATGTACATGAATTTTAAAAATTTTAAGATATTTTTAAT  2294

Query 1858  --------------------------------------------------------------------------  1857
                                                                                      
Sbjct 2295  TTAATAAAATTTATATAACTATATTGTATTTATTTCCCTTAATTCTTATAAATTAAAAACATCAGAAAATGAAT  2368

Query 1858  ---------------------------------  1857
                                             
Sbjct 2369  TATTAAATAAAAGACAGTGTTTTCTTTTCTGGA  2401

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