Nucleotide Global Alignment

Description

Query:
ccsbBroad304_09691
Subject:
NR_046430.2
Aligned Length:
1992
Identities:
255
Gaps:
1737

Alignment

Query    1  -----------------ATGGCTCGCAGACACTGCTTCTCCTACTGGTTACTGGTATGCTGGTTGGTGGTAACT  57
                             |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct    1  ACTGCTCAGTAGAAGCCATGGCTCGCAGACACTGCTTCTCCTACTGGTTACTGGTATGCTGGTTGGTGGTAACT  74

Query   58  GTGGCAG-------------------------------------------------------------------  64
            |||||||                                                                   
Sbjct   75  GTGGCAGAAGTAGAGACGGGGTTTCACCATGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCTGCCAG  148

Query   65  ---------------------------------------------------------------------AAGGA  69
                                                                                 |||||
Sbjct  149  CCTCGGCCTCCCAAAGTTCTGGGATTACAGGCATGAGCCACAGCGCCCGGCCAAAATCCGCACATCTTAAAGGA  222

Query   70  CAAGAAGAGGTATTTACGCCTCCTGGAGATTCACAAAATAATGCGGACGCTACCGACTGCCAGATCTTTACACT  143
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  CAAGAAGAGGTATTTACGCCTCCTGGAGATTCACAAAATAATGCGGACGCTACCGACTGCCAGATCTTTACACT  296

Query  144  CACCCCTCCACCTGCCCCGAGGAGTCCGGTCACAAGGGCCCAGCCCATCACAAAGACACCCAGGTGTCCCTTCC  217
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||             
Sbjct  297  CACCCCTCCACCTGCCCCGAGGAGTCCGGTCACAAGGGCCCAGCCCATCACAAAGACACCC-------------  357

Query  218  ATTTTTTTCCACGAAGGCCCAGAATCCATTTTAGGTTTCCAAACAGACCTTTCGTCCCTTCAAGGTGTAACCAC  291
                                                                                      
Sbjct  358  --------------------------------------------------------------------------  357

Query  292  CGTTTTCCATTCCAGCCATTTTATTGGCCACACCGTTACCTTACTTATAGGTATTTCCCCAGAAGAAGACTCCA  365
                                                            ||||||||||||||||||||||||||
Sbjct  358  ------------------------------------------------AGGTATTTCCCCAGAAGAAGACTCCA  383

Query  366  GAGAGGAAGCTCATCTGAGGAAAGC-------------------------------------------------  390
            |||||||||||||||||||||||||                                                 
Sbjct  384  GAGAGGAAGCTCATCTGAGGAAAGCTGAGAGGGAAGAGAAACCCAAACATACTGAAGCAAAAAAAAGCCTATCC  457

Query  391  --------------------------------------------------------------------------  390
                                                                                      
Sbjct  458  TTCAGAAAAAAGCAACAAAAAGATTTCTGTTTTATCTTTCGAAACTAAAACTATTGGATTTGAAGATTAAGTAT  531

Query  391  --------------------------------------------------------------------------  390
                                                                                      
Sbjct  532  CCTAAACATCACTGACTAGAAACTGTTCTCTTTGTCAGCAGTGAAGATATTGGATCATAGGTTATTGATGGTTG  605

Query  391  --------------------------------------------------------------------------  390
                                                                                      
Sbjct  606  CAAAATTGGACAATAACCACGTTATTTTTATCCTCAACCTCTTATGGTCACAGGATATTTATGCAAATAAAATC  679

Query  391  --------------------------------------------------------------------------  390
                                                                                      
Sbjct  680  TTTAAATGGGTGGCTCTAGTAATTCCTATCCATACTAAGATGCTGAGAGAATCCATCTCCTCCTCTAAATTAAA  753

Query  391  --------------------------------------------------------------------------  390
                                                                                      
Sbjct  754  CAGGATTTAAATAAATTGAGATCATTATAAACCACACGAAGAAACTGATGACACCGTTTTTATACTCATTGGAA  827

Query  391  --------------------------------------------------------------------------  390
                                                                                      
Sbjct  828  AACATACAGAGCAAGGTGCATTGACAAAGTAAACTTTAAAAGAAATTATAAAGCTTAAAGCAATTAAAAAGTTA  901

Query  391  --------------------------------------------------------------------------  390
                                                                                      
Sbjct  902  TGAGGAGTCTGACTGTAGCTAATACTTTAAAGATATAAACTGACTTGTCTAACCCAAATAATAATAATTATTAT  975

Query  391  --------------------------------------------------------------------------  390
                                                                                      
Sbjct  976  TATTTTCTTGGAGACAGAATTTCACTCTTGTTACCCAGGCTGGAGTTTAGTGGTGCTGTCTCGGCTCACTGCAA  1049

Query  391  --------------------------------------------------------------------------  390
                                                                                      
Sbjct 1050  CCTCTGCCTCCCGGGTTCAAGCAATTCTCTTGCCTCAGCCTCCCAAGTAGCTGGGATTATAGGTGCTCGCTACC  1123

Query  391  --------------------------------------------------------------------------  390
                                                                                      
Sbjct 1124  AAGCCTGGCCAATTTTTTGTATTTTTAGTAGAGATGGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCT  1197

Query  391  --------------------------------------------------------------------------  390
                                                                                      
Sbjct 1198  GACCTCAGGTGATCCACCCACCTCGGCCTCCCAGAGTGCTGGGATTACAGGCATGAGTCACTGCGCCCAGCCCC  1271

Query  391  --------------------------------------------------------------------------  390
                                                                                      
Sbjct 1272  AAATAATTACTTTTAAACTATAGTATCTAAATTTACTTTAATGTTGACTTCAACTGATGCAAATTAATTTGATA  1345

Query  391  --------------------------------------------------------------------------  390
                                                                                      
Sbjct 1346  ATTTTCTCACTGTTTCCCGTTATCATTACATAGATGCTGGCTAAAATAATATACTTCCTCTCAAACTTTTAACG  1419

Query  391  --------------------------------------------------------------------------  390
                                                                                      
Sbjct 1420  TAATTCCAGGTTCAAAATGCCTGATTAAACTGCTACAAGAATATTCTGGTACCTCTAGAACTCCACAGAGATAA  1493

Query  391  --------------------------------------------------------------------------  390
                                                                                      
Sbjct 1494  GTTCACTCAACTCTTGGAACCTTGTATTCTCAGGGTGCAATATGAGAAACAAATCCCACAGATTGCATTGATTG  1567

Query  391  --------------------------------------------------------------------------  390
                                                                                      
Sbjct 1568  GTTATTTGTTTTGGCCACTCTGTAAAACACATCTTCCTGTTTATGCCACTTATCTTGCCTGTAACATAAGAACT  1641

Query  391  --------------------------------------------------------------------------  390
                                                                                      
Sbjct 1642  TTAGTTCTGCATATGTGGTCAGTGGTTTGCACTTTTTCCTCCCAAGATCTACATGCAAAAGTTGCTGTTGCTGC  1715

Query  391  --------------------------------------------------------------------------  390
                                                                                      
Sbjct 1716  TGCTGCTACAAAAACAGAAAAAAAAAAATCAGGATGAAGACATGAAAGGACTTTGGGAATGGTTGCCCTAAAAA  1789

Query  391  --------------------------------------------------------------------  390
                                                                                
Sbjct 1790  AGGAAAGAGAGATAAAATCATCATGCTATGTTTCTTTGCTTTATTAAAATGATCAAAAAAGAAAAAAA  1857

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