Nucleotide Global Alignment

Description

Query:
ccsbBroad304_09908
Subject:
NM_001289931.1
Aligned Length:
1434
Identities:
1338
Gaps:
96

Alignment

Query    1  ATGGAACTCTTAACATTCAAGGATGTGGCCATAGAATTCTCTCCAGAAGAGTGGAAATGTCTGGACACTTCCCA  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  GCAGAATTTATATAGAGATGTGATGTTGGAGAACTACAGAAACCTGGTCTCCCTGGGTGTTAGTATCTCTAACC  148
                                  ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct    1  ----------------------ATGTTGGAGAACTACAGAAACCTGGTCTCCCTGGGTGTTAGTATCTCTAACC  52

Query  149  CAGACCTGGTCACCAGTCTGGAGCAAAGAAAAGAGCCCTACAATTTGAAGATACATGAAACAGCAGCCAGACCC  222
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   53  CAGACCTGGTCACCAGTCTGGAGCAAAGAAAAGAGCCCTACAATTTGAAGATACATGAAACAGCAGCCAGACCC  126

Query  223  CCAGCTGTGTGTTCTCATTTCACCCAAAACCTTTGGACAGTGCAGGGCATAGAAGATTCATTCCACAAACTTAT  296
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  127  CCAGCTGTGTGTTCTCATTTCACCCAAAACCTTTGGACAGTGCAGGGCATAGAAGATTCATTCCACAAACTTAT  200

Query  297  ACCAAAAGGACATGAGAAACGTGGACATGAGAATTTAAGAAAAACTTGTAAAAGTATAAATGAGTGTAAGGTGC  370
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  201  ACCAAAAGGACATGAGAAACGTGGACATGAGAATTTAAGAAAAACTTGTAAAAGTATAAATGAGTGTAAGGTGC  274

Query  371  AGAAAGGTGGTTATAATAGAATTAACCAATGCTTATTAACTACCCAGAAAAAAACAATTCAATCTAATATATGT  444
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  275  AGAAAGGTGGTTATAATAGAATTAACCAATGCTTATTAACTACCCAGAAAAAAACAATTCAATCTAATATATGT  348

Query  445  GTCAAAGTTTTTCATAAATTTTCAAATTCAAACAAAGATAAGATAAGATATACTGGAGATAAAACCTTTAAATG  518
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  349  GTCAAAGTTTTTCATAAATTTTCAAATTCAAACAAAGATAAGATAAGATATACTGGAGATAAAACCTTTAAATG  422

Query  519  TAAAGAATGTGGCAAATCATTTCACGTGCTCTCACGCCTAACTCAACACAAAAGAATTCATACTGGAGAGAACC  592
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  423  TAAAGAATGTGGCAAATCATTTCACGTGCTCTCACGCCTAACTCAACACAAAAGAATTCATACTGGAGAGAACC  496

Query  593  CCTACACATGTGAAGAATGTGGCAAAGCCTTTAATTGGTCCTCAATTCTTACTAAACATAAGAGAATTCATGCC  666
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  497  CCTACACATGTGAAGAATGTGGCAAAGCCTTTAATTGGTCCTCAATTCTTACTAAACATAAGAGAATTCATGCC  570

Query  667  AGAGAGAAATTCTACAAGTGTGAAGAATGTGGTAAAGGCTTTACTCGGTCCTCACACCTTACTAAACATAAGAG  740
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  571  AGAGAGAAATTCTACAAGTGTGAAGAATGTGGTAAAGGCTTTACTCGGTCCTCACACCTTACTAAACATAAGAG  644

Query  741  AATTCATACTGGAGAGAAACCCTACATATGTGAAAAATGTGGTAAAGCTTTTAACCAATCCTCAACCCTTAATT  814
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  645  AATTCATACTGGAGAGAAACCCTACATATGTGAAAAATGTGGTAAAGCTTTTAACCAATCCTCAACCCTTAATT  718

Query  815  TACATAAGAGAATTCATTCTGCACAAAAATACTACAAATGTGAAGAATGTGGTAAAGCCTTTAAGTGGTCCTCA  888
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  719  TACATAAGAGAATTCATTCTGCACAAAAATACTACAAATGTGAAGAATGTGGTAAAGCCTTTAAGTGGTCCTCA  792

Query  889  TCCCTTAATGAACATAAGAGAATTCATGCTGGAGAGAAACCCTTCTCATGCGAAGAATGTGGCAATGTCTTTAC  962
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  793  TCCCTTAATGAACATAAGAGAATTCATGCTGGAGAGAAACCCTTCTCATGCGAAGAATGTGGCAATGTCTTTAC  866

Query  963  CACATCCTCAGACTTTGCTAAACATAAGAGAATTCATACAGGAGAGAAACCCTACAAATGTGAAGAATGTGGAA  1036
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  867  CACATCCTCAGACTTTGCTAAACATAAGAGAATTCATACAGGAGAGAAACCCTACAAATGTGAAGAATGTGGAA  940

Query 1037  AATCCTTTAATAGGTCCACAACTCTTACGACACATAAGAGAATCCATACTGGAGAGAAACCCTACACATGTGAA  1110
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  941  AATCCTTTAATAGGTCCACAACTCTTACGACACATAAGAGAATCCATACTGGAGAGAAACCCTACACATGTGAA  1014

Query 1111  GAATGTGGAAAAGCCTTTAATTGGTCCTCAACCCTTAATGTACACAAGAGAATTCACTCTGGAAAAAATCCCTA  1184
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1015  GAATGTGGAAAAGCCTTTAATTGGTCCTCAACCCTTAATGTACACAAGAGAATTCACTCTGGAAAAAATCCCTA  1088

Query 1185  CAAATGTGAAGATTGTGGCAAAGCCTTTAAAGTGTTTGCAAACCTGCATAATCATAAGAAAATTCATACTGGAG  1258
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1089  CAAATGTGAAGATTGTGGCAAAGCCTTTAAAGTGTTTGCAAACCTGCATAATCATAAGAAAATTCATACTGGAG  1162

Query 1259  AGAAACCCTACATATGTAAACAATGTGGCAAAGCCTTTAAACAGTCCTCACACTTGAATAAACATAAGAAAATT  1332
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1163  AGAAACCCTACATATGTAAACAATGTGGCAAAGCCTTTAAACAGTCCTCACACTTGAATAAACATAAGAAAATT  1236

Query 1333  CACACTGTAGATAAACCCTACAAATGTAAAGAATGCGGGAAAGCTTTTAAGCAGTACTCCAACCTTCCTCAACA  1406
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1237  CACACTGTAGATAAACCCTACAAATGTAAAGAATGCGGGAAAGCTTTTAAGCAGTACTCCAACCTTCCTCAACA  1310

Query 1407  TAAGAGAACTCATACTGGAGGAAAATTT  1434
            ||||||||||||||||||||||||||||
Sbjct 1311  TAAGAGAACTCATACTGGAGGAAAATTT  1338

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