Nucleotide Global Alignment

Description

Query:
ccsbBroad304_10171
Subject:
XR_001744751.2
Aligned Length:
2300
Identities:
278
Gaps:
2022

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  AGAAGGGAGGTGGTCGCCCTCCGTCGTGGTCTGGCGTGTATTCCGAGCCTTGGTGTCTGGCGGTTTCCGAGCGT  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  TGGTGTCTGGCGGTTTCCGAGCGTTGGTGTCTTGGCGGTTTCCGACCGTTGGTGTCTGGCGGTTTCCGACCGTT  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  GGTGTCTGGCACGCGCCACCCTCTCTTGCTTTGGTTGCGCCATGCCGATGTACCAGACAAGAAGACAAGAAAAT  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  GATTTGAGGACAGCTTCAATCGCGGTGTGAAGAAGAAAGCAGCAAAACGACCACTGAAAACAACGCCGGTGGCA  296

Query    1  -------------------------------------------------------------------ATGATCT  7
                                                                               |||||||
Sbjct  297  AAATATCCAAAGAAAGGGTCCCAAGCGGTACATCGTCATAGCCGGAAACAGTCAGAGCCACCAGCCAATGATCT  370

Query    8  TTTCAATGCTGCGAAAGCTGCCAAAAGTGACATGCAGGGATGTCCTTCCTGAGATCCGTGCTATCTGCATTGAG  81
            |||||||||||||||||||||||||||||||||||                                       
Sbjct  371  TTTCAATGCTGCGAAAGCTGCCAAAAGTGACATGC---------------------------------------  405

Query   82  GAAATTGGGTGTTGGATGCAAAGCTACAGCACGTCTTTCCTCACCGACAGCTATTTAAAATATATTGGTTGGAC  155
                                                                                      
Sbjct  406  --------------------------------------------------------------------------  405

Query  156  TCTGCATGATAAGCACCGAGAAGTCCGCGTGAAGTGCGTGAAGGCTCTGAAAGGGCTGTACGGTAACCGGGACC  229
                       |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  406  -----------AGCACCGAGAAGTCCGCGTGAAGTGCGTGAAGGCTCTGAAAGGGCTGTACGGTAACCGGGACC  468

Query  230  TGACCGCACGCCTGGAGCTCTTCACTGGCCGCTTCAAGGACTGGATGGTTTCCATGATCATGGACAGAGAGTAC  303
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  469  TGACCGCACGCCTGGAGCTCTTCACTGGCCGCTTCAAGGACTGGATGGTTTCCATGATCATGGACAGAGAGTAC  542

Query  304  AGTGTGGCAGTGGAGGCCGTCAGATTACTGATACTTATCCTTAAGAACATGGAAGGGGTGCTGATGGACGTGGA  377
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  543  AGTGTGGCAGTGGAGGCCGTCAGATTACTGATACTTATCCTTAAGAACATGGAAGGGGTGCTGATGGACGTGGA  616

Query  378  CTGTGAGAGCGTCTACCCCATTGTG-------------------------------------------------  402
            |||||||||||||||||||||||||                                                 
Sbjct  617  CTGTGAGAGCGTCTACCCCATTGTGTAGGCCTCTAATTGAGGCCTGGCCTCTGCTGTGGGTGAATTTCTGTACT  690

Query  403  --------------------------------------------------------------------------  402
                                                                                      
Sbjct  691  GGAAACTTTTCTACCCTGAGTGCGAGATAAGAACGATGGGTGGAAGAGAGCAACGCCAGAGCCCAGGTGCCCAG  764

Query  403  --------------------------------------------------------------------------  402
                                                                                      
Sbjct  765  AGGACTTTCTTCCAGCTTCTGCTGTCCTTCTTTGTGGAGAGCAAGAATCGGCTCCCAGACACCTGCCACTCGTG  838

Query  403  --------------------------------------------------------------------------  402
                                                                                      
Sbjct  839  AATGCATCTGATAAACTCACTCACACTGAGGCCTTGGGGACTGAGAGTGCGATGACATGGATCCTGCGGACAAA  912

Query  403  --------------------------------------------------------------------------  402
                                                                                      
Sbjct  913  CCGCCCCAGGGCGTACCTAGCACCGAAGCATCAGGCGCCACTAGGTCTCCAGCTCCTTCTCGGATGACGTCCTT  986

Query  403  --------------------------------------------------------------------------  402
                                                                                      
Sbjct  987  CAGCACGCCCCGGTCCCCCGAGATGTCCAGCATCCTCTGACTTAACCGCTCGTACAGGGACTGATGGAGAATGA  1060

Query  403  --------------------------------------------------------------------------  402
                                                                                      
Sbjct 1061  AAGCCAGGCCTCAGAGCCGCAGACCCACCCGGCCACCCCTCAGCGTCTACGCCCCCACGTCTGGGCCCTCACCT  1134

Query  403  --------------------------------------------------------------------------  402
                                                                                      
Sbjct 1135  GGCCGGGGGCGTCGTCCCCTTCCAGGACTCCCTGGTTTAACGCGCTTCCCCCCATGTCCTAGCTGCCCTCCCTG  1208

Query  403  --------------------------------------------------------------------------  402
                                                                                      
Sbjct 1209  TGGCGTGAGCCTTCGGCCTGGTGCGCCCCGCTGCCCTTCCTGGCTGTGACTCTGGTGGGGTTCCGAAGGCCCCT  1282

Query  403  --------------------------------------------------------------------------  402
                                                                                      
Sbjct 1283  TTATGCCCGGCAGACCCCTACCGACGGCGGCATTCCATTCTGGGGCCACGAGGAGGCACTCATCGTTTCGTTCC  1356

Query  403  --------------------------------------------------------------------------  402
                                                                                      
Sbjct 1357  AACCGCCGCCAACGGCCCTGGCCCTCGCGAGCTCTGGAACTACAGAGGTCGCACGAGGCTCGCTCTGAGCCCAG  1430

Query  403  --------------------------------------------------------------------------  402
                                                                                      
Sbjct 1431  GCTGGAGTTCAGTGATGGATCTCAGCTCACTGCAGCCGCCACCTCCTGGGCTCAAGAGATCCTCCTGCCTCGGC  1504

Query  403  --------------------------------------------------------------------------  402
                                                                                      
Sbjct 1505  CTCCCAAGTAGCTGGGATTACAGACGTGCACCACCAGGCCCAGCTAATTTATTTTTTAGTTTTTAATTTGCTGG  1578

Query  403  --------------------------------------------------------------------------  402
                                                                                      
Sbjct 1579  TAAGATGGTTTGTAGCTTTGTTGCCTAGGCTGGTCTTGAACTCCTGGCTTCAAGCGATCCTCCAGTCTTGACCT  1652

Query  403  --------------------------------------------------------------------------  402
                                                                                      
Sbjct 1653  CCCAAAGTGCTGGGATTATAGGCGTAGGCTACAGCCAACTTTCAATACTGCCCCATTGGGGGTTACGTTTCCAA  1726

Query  403  --------------------------------------------------------------------------  402
                                                                                      
Sbjct 1727  CACATGAAATTAGGAGGATACATTCAAACCACAGCAGTATATTATGACCATAATATTCATTAACTGTGTAACAG  1800

Query  403  --------------------------------------------------------------------------  402
                                                                                      
Sbjct 1801  GCTGGGCGCGGTGGCTCACACCTGTAATCCCAGCACTTTGGGAGACCAGAGTGGGTAGATCACTCGAGGTCAGG  1874

Query  403  --------------------------------------------------------------------------  402
                                                                                      
Sbjct 1875  AGTTTGAGACCAGCCTGGCCCACATGATGAAACCGCCTCTCTACTAAAAATACAAAAAATTAGCCGGTGTGGTG  1948

Query  403  --------------------------------------------------------------------------  402
                                                                                      
Sbjct 1949  GCAGGCGCCTGTAACCTCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGAATCCGGGAGGTGGAGGTGGC  2022

Query  403  --------------------------------------------------------------------------  402
                                                                                      
Sbjct 2023  AGTGAGCCTGATTGCACCACTGCACTCCAGCCTGGGCAACAAGAGCAAAACTCTGTCTCAATAAACAAACAAAC  2096

Query  403  --------------------------------------------------------------------------  402
                                                                                      
Sbjct 2097  AAACAAAACCTGTATAACAGAGTGTCATTGAATTTCTAAACGTTGAAAGACTTCACATTAAAAAAAAACTCACA  2170

Query  403  ------  402
                  
Sbjct 2171  ATTTAA  2176

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