Nucleotide Global Alignment

Description

Query:
ccsbBroad304_10171
Subject:
XR_002956442.1
Aligned Length:
1381
Identities:
266
Gaps:
1110

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  TTTTTTTTCCGAACGCCCGCAGCAGGGTCAGAAGGGAGGTGGTCGCCCTCCGTCGTGGTCTGGCGTGTATTCCG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  AGCCTTGGTGTCTGGCGGTTTCCGAGCGTTGGTGTCTGGCGGTTTCCGAGCGTTGGTGTCTTGGCGGTTTCCGA  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  CCGTTGGTGTCTGGCGGTTTCCGACCGTTGGTGTCTGGCACGCGCCACCCTCTCTTGCTTTGGTTGCGCCATGC  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  CGATGTACCAGACAAGAAGACAAGAAAATGATTTGAGGACAGCTTCAATCGCGGTGTGAAGAAGAAAGCAGCAA  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  AACGACCACTGAAAACAACGCCGGTGGCAAAATATCCAAAGAAAGGGTCCCAAGCGGTACATCGTCATAGCCGG  370

Query    1  ----------------------ATGATCTTTTCAATGCTGCGAAAGCTGCCAAAAGTGACATGCAGGGATGTCC  52
                                  ||||||||||||||||||||||||||||||||||||||||||          
Sbjct  371  AAACAGTCAGAGCCACCAGCCAATGATCTTTTCAATGCTGCGAAAGCTGCCAAAAGTGACATGC----------  434

Query   53  TTCCTGAGATCCGTGCTATCTGCATTGAGGAAATTGGGTGTTGGATGCAAAGCTACAGCACGTCTTTCCTCACC  126
                                                                                      
Sbjct  435  --------------------------------------------------------------------------  434

Query  127  GACAGCTATTTAAAATATATTGGTTGGACTCTGCATGATAAGCACCGAGAAGTCCGCGTGAAGTGCGTGAAGGC  200
                                                    ||||||||||||||||||||||||||||||||||
Sbjct  435  ----------------------------------------AGCACCGAGAAGTCCGCGTGAAGTGCGTGAAGGC  468

Query  201  TCTGAAAGGGCTGTACGGTAACCGGGACCTGACCGCACGCCTGGAGCTCTTCACTGGCCGCTTCAAGGACTGGA  274
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  469  TCTGAAAGGGCTGTACGGTAACCGGGACCTGACCGCACGCCTGGAGCTCTTCACTGGCCGCTTCAAGGACTGGA  542

Query  275  TGGTTTCCATGATCATGGACAGAGAGTACAGTGTGGCAGTGGAGGCCGTCAGATTACTGATACTTATCCT----  344
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
Sbjct  543  TGGTTTCCATGATCATGGACAGAGAGTACAGTGTGGCAGTGGAGGCCGTCAGATTACTGATACTTATCCTTAAA  616

Query  345  ----------------------TAAGAAC-----ATGGAAG------------------GGGTG--CTGATGGA  371
                                  |||||||     .||||||                  .||||  |.|| |||
Sbjct  617  CTTTTCTACCCTGAGTGCGAGATAAGAACGATGGGTGGAAGAGAGCAACGCCAGAGCCCAGGTGCCCAGA-GGA  689

Query  372  C-------------GTGGACTGT-----------GAGAGC--GTCTACCCCATTGTG-----------------  402
            |             .||  ||||           ||||||  ||||    ||||.||                 
Sbjct  690  CTTTCTTCCAGCTTCTG--CTGTCCTTCTTTGTGGAGAGCAAGTCT----CATTCTGTCACCCAGGCTGGAGTG  757

Query  403  --------------------------------------------------------------------------  402
                                                                                      
Sbjct  758  CAGTGGCAGTTCTCAGCTCACCGAAACCTCTGCCTCCCGGGCTCAAGCAATTCTCATGTCTCAGCCTCCCAAGT  831

Query  403  --------------------------------------------------------------------------  402
                                                                                      
Sbjct  832  AGCTGGGATTACGGGTGCACACCACCACACCTGGCTGATTTATGTATTTTTTTCGTAGAGACAGGGTTTTGCCA  905

Query  403  --------------------------------------------------------------------------  402
                                                                                      
Sbjct  906  TGTTGGCCGGGCTGGTCTCGAACTCCTGACCTCGGGTGATCCACCCACCTCAGCCTCCCAAAGTGCTGGGATTA  979

Query  403  --------------------------------------------------------------------------  402
                                                                                      
Sbjct  980  CAGGTGTGAGCCACCGTGCCCGGCCTTGACTACCATATTTTAAATTTACTGGAGGACTTTTTTGTTCTCTTCTT  1053

Query  403  --------------------------------------------------------------------------  402
                                                                                      
Sbjct 1054  TTTTCTTTTTTTAATAGCATCCCGCTCTTATTTCAGAATAAAAAAAATTTTAAGGTATGTTGAGTAAGAATCTA  1127

Query  403  --------------------------------------------------------------------------  402
                                                                                      
Sbjct 1128  TAGAGCAATGAAAATGCAAGAGCAATAGCTATGGGCACCAAATGGTCAATCTTCTTATCATAATGTTGAGTGGA  1201

Query  403  -------------------------------------------------  402
                                                             
Sbjct 1202  AGAAGCCAGGTCCACCAGACACATGCTGCTCATTTATGCAAAGTTTGGA  1250

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