Nucleotide Global Alignment

Description

Query:
ccsbBroad304_10171
Subject:
XR_002956443.1
Aligned Length:
2774
Identities:
278
Gaps:
2496

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  TTTTTTTTCCGAACGCCCGCAGCAGGGTCAGAAGGGAGGTGGTCGCCCTCCGTCGTGGTCTGGCGTGTATTCCG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  AGCCTTGGTGTCTGGCGGTTTCCGAGCGTTGGTGTCTGGCGGTTTCCGAGCGTTGGTGTCTTGGCGGTTTCCGA  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  CCGTTGGTGTCTGGCGGTTTCCGACCGTTGGTGTCTGGCACGCGCCACCCTCTCTTGCTTTGGTTGCGCCATGC  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  CGATGTACCAGACAAGAAGACAAGAAAATGATTTGAGGACAGCTTCAATCGCGGTGTGAAGAAGAAAGCAGCAA  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  AACGACCACTGAAAACAACGCCGGTGGCAAAATATCCAAAGAAAGGGTCCCAAGCGGTACATCGTCATAGCCGG  370

Query    1  ----------------------ATGATCTTTTCAATGCTGCGAAAGCTGCCAAAAGTGACATGCAGGGATGTCC  52
                                  ||||||||||||||||||||||||||||||||||||||||||          
Sbjct  371  AAACAGTCAGAGCCACCAGCCAATGATCTTTTCAATGCTGCGAAAGCTGCCAAAAGTGACATGC----------  434

Query   53  TTCCTGAGATCCGTGCTATCTGCATTGAGGAAATTGGGTGTTGGATGCAAAGCTACAGCACGTCTTTCCTCACC  126
                                                                                      
Sbjct  435  --------------------------------------------------------------------------  434

Query  127  GACAGCTATTTAAAATATATTGGTTGGACTCTGCATGATAAGCACCGAGAAGTCCGCGTGAAGTGCGTGAAGGC  200
                                                    ||||||||||||||||||||||||||||||||||
Sbjct  435  ----------------------------------------AGCACCGAGAAGTCCGCGTGAAGTGCGTGAAGGC  468

Query  201  TCTGAAAGGGCTGTACGGTAACCGGGACCTGACCGCACGCCTGGAGCTCTTCACTGGCCGCTTCAAGGACTGGA  274
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  469  TCTGAAAGGGCTGTACGGTAACCGGGACCTGACCGCACGCCTGGAGCTCTTCACTGGCCGCTTCAAGGACTGGA  542

Query  275  TGGTTTCCATGATCATGGACAGAGAGTACAGTGTGGCAGTGGAGGCCGTCAGATTACTGATACTTATCCTTAAG  348
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  543  TGGTTTCCATGATCATGGACAGAGAGTACAGTGTGGCAGTGGAGGCCGTCAGATTACTGATACTTATCCTTAAG  616

Query  349  AACATGGAAGGGGTGCTGATGGACGTGGACTGTGAGAGCGTCTACCCCATTGTG--------------------  402
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||                    
Sbjct  617  AACATGGAAGGGGTGCTGATGGACGTGGACTGTGAGAGCGTCTACCCCATTGTGTAGGCCTCTAATTGAGGCCT  690

Query  403  --------------------------------------------------------------------------  402
                                                                                      
Sbjct  691  GGCCTCTGCTGTGGGTGAATTTCTGTACTGGAAACTTTTCTACCCTGAGTGCGAGATAAGAACGATGGGTGGAA  764

Query  403  --------------------------------------------------------------------------  402
                                                                                      
Sbjct  765  GAGAGCAACGCCAGAGCCCAGGTGCCCAGAGGACTTTCTTCCAGCTTCTGCTGTCCTTCTTTGTGGAGAGCAAG  838

Query  403  --------------------------------------------------------------------------  402
                                                                                      
Sbjct  839  TCTCATTCTGTCACCCAGGCTGGAGTGCAGTGGCAGTTCTCAGCTCACCGAAACCTCTGCCTCCCGGGCTCAAG  912

Query  403  --------------------------------------------------------------------------  402
                                                                                      
Sbjct  913  CAATTCTCATGTCTCAGCCTCCCAAGTAGCTGGGATTACGGGTGCACACCACCACACCTGGCTGATTTATGTAT  986

Query  403  --------------------------------------------------------------------------  402
                                                                                      
Sbjct  987  TTTTTTCGTAGAGACAGGGTTTTGCCATGTTGGCCGGGCTGGTCTCGAACTCCTGACCTCGGGTGATCCACCCA  1060

Query  403  --------------------------------------------------------------------------  402
                                                                                      
Sbjct 1061  CCTCAGCCTCCCAAAGTGCTGGGATTACAGGTGTGAGCCACCGTGCCCGGCCTTGACTACCATATTTTAAATTT  1134

Query  403  --------------------------------------------------------------------------  402
                                                                                      
Sbjct 1135  ACTGGAGGACTTTTTTGTTCTCTTCTTTTTTCTTTTTTTAATAGCATCCCGCTCTTATTTCAGAATAAAAAAAA  1208

Query  403  --------------------------------------------------------------------------  402
                                                                                      
Sbjct 1209  TTTTAAGGTATGTTGAGTAAGAATCTATAGAGCAATGAAAATGCAAGAGCAATAGCTATGGGCACCAAATGGTC  1282

Query  403  --------------------------------------------------------------------------  402
                                                                                      
Sbjct 1283  AATCTTCTTATCATAATGTTGAGTGGAAGAAGCCAGGTCCACCAGACACATGCTGCTCATTTATGCAAAGTTTG  1356

Query  403  --------------------------------------------------------------------------  402
                                                                                      
Sbjct 1357  GACACAGGCAAAACAAAACTAGTTTGATCGTGATGGGAAACATTAGAGAAATGCAAAGACATGACCATCATAAT  1430

Query  403  --------------------------------------------------------------------------  402
                                                                                      
Sbjct 1431  TGTCAGGAGAAGGCATTGGTTAGGATTGGGAAGCGGCAAGCAGAAGCATTTAGGGATTGGCTGGCAATGTTTTA  1504

Query  403  --------------------------------------------------------------------------  402
                                                                                      
Sbjct 1505  CTTCTCGGCTGAGTGAGGGTTGCATCGGTGTTTATTTGATAACACGTTCTAGGGGCTGGGCAAGATGGCTCATG  1578

Query  403  --------------------------------------------------------------------------  402
                                                                                      
Sbjct 1579  TTTGTAGTCTCAGTACTTTGGGAGGCCAAAGATGGGAGGATTGCTTGAGCCCGTGAGTTTGAGACCAGCGTGGG  1652

Query  403  --------------------------------------------------------------------------  402
                                                                                      
Sbjct 1653  TGACATAGCGAGACCCTGTCTCTACAAAAAATTAAAAAAAAAAAAAAAAACCCAGCTGCGTGTGGTGGCACAGC  1726

Query  403  --------------------------------------------------------------------------  402
                                                                                      
Sbjct 1727  CTCAAACTCCTGGGCTCAAGCGATCCTCCCTTCGCCTTCCAGCCACTCAGGAGGCTGGGGTGGGAGGATCGCTT  1800

Query  403  --------------------------------------------------------------------------  402
                                                                                      
Sbjct 1801  GAACCCAGGAGTTTGAGGCTGCAGTGAGCTATGAATGAGCCACTGCACTCCAGCCTGGGCAACAGGGCAAGACC  1874

Query  403  --------------------------------------------------------------------------  402
                                                                                      
Sbjct 1875  CTGTCTCAAAAAAAAAAAATTTAATTTGAACACTTCTGTTTTGTGCAGTTTTCTCTGTTATATTTTACTTTTTA  1948

Query  403  --------------------------------------------------------------------------  402
                                                                                      
Sbjct 1949  AAAAGAAAAAGCGGCTGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCAAGGTGGGCGGATC  2022

Query  403  --------------------------------------------------------------------------  402
                                                                                      
Sbjct 2023  ACCTGATGTCAGGAGTTCGAGACCAGCCTGACCAACATGGAGAAACCTCGTCTCTACTAAAAACACAAAAAATT  2096

Query  403  --------------------------------------------------------------------------  402
                                                                                      
Sbjct 2097  AGCCGGGCGTGGTGGCGCATGCCTGTAATCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATCGCTTGAACCTAG  2170

Query  403  --------------------------------------------------------------------------  402
                                                                                      
Sbjct 2171  GAGGCAGAGGTTGCAGTGAGCTGAGATTGCACCACTGCACCCCAGCCTGGGCAATAAGAGTGAAACTCCATCTC  2244

Query  403  --------------------------------------------------------------------------  402
                                                                                      
Sbjct 2245  AAAAAAAAAAAAAAAAAAAGGTGCATGAAACATATGAAGCAAAAAGTGAAAGTCCCCATTCTTTTCCTTTTTCC  2318

Query  403  --------------------------------------------------------------------------  402
                                                                                      
Sbjct 2319  AGAGGTGATTTTTGTGGCCAATCTGGTTTCATTCCCTCCCAGACACTTTTCTAGGCATCTATGCGCCTCTATTC  2392

Query  403  --------------------------------------------------------------------------  402
                                                                                      
Sbjct 2393  ACATATAAACAAAATAGGAGTTTTCCTGTGCTTCCCTTAAATGGCATATGTATCTTTCACTCTTTTTTTTCACC  2466

Query  403  --------------------------------------------------------------------------  402
                                                                                      
Sbjct 2467  TAGTGGATCTTTAATACCTTAAAAGCTCAACCTGGGCTTGGTGCGGTGGCTCATACGTGTAATCCCAGGCCTTT  2540

Query  403  --------------------------------------------------------------------------  402
                                                                                      
Sbjct 2541  GGGAGGCCAAGGTGGGAGGATCACTTGAGCTCAGGAGTTCCAGACCATTCCAAAGCAAAAACAAAAGGATTTTG  2614

Query  403  ------------------------------------  402
                                                
Sbjct 2615  AGATCAGTGTGGGCAACTTAGCAAAACACCATCTCT  2650

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