Nucleotide Global Alignment

Description

Query:
ccsbBroad304_10171
Subject:
XR_002956444.1
Aligned Length:
4193
Identities:
278
Gaps:
3915

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ACCAGGTAAAGCCCTATCACCGGGTCTGCGCCCCTCTCCGTGTGGAGCCCACCTGCATGTACTGGCTCCCCAAC  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  ATGCACGGCAGGAGCGGCGGCCCAGCACTTGGCACTGGCCACTTGCAGACAAGAAGACAAGAAAATGATTTGAG  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  GACAGCTTCAATCGCGGTGTGAAGAAGAAAGCAGCAAAACGACCACTGAAAACAACGCCGGTGGCAAAATATCC  222

Query    1  -----------------------------------------------------------ATGATCTTTTCAATG  15
                                                                       |||||||||||||||
Sbjct  223  AAAGAAAGGGTCCCAAGCGGTACATCGTCATAGCCGGAAACAGTCAGAGCCACCAGCCAATGATCTTTTCAATG  296

Query   16  CTGCGAAAGCTGCCAAAAGTGACATGCAGGGATGTCCTTCCTGAGATCCGTGCTATCTGCATTGAGGAAATTGG  89
            |||||||||||||||||||||||||||                                               
Sbjct  297  CTGCGAAAGCTGCCAAAAGTGACATGC-----------------------------------------------  323

Query   90  GTGTTGGATGCAAAGCTACAGCACGTCTTTCCTCACCGACAGCTATTTAAAATATATTGGTTGGACTCTGCATG  163
                                                                                      
Sbjct  324  --------------------------------------------------------------------------  323

Query  164  ATAAGCACCGAGAAGTCCGCGTGAAGTGCGTGAAGGCTCTGAAAGGGCTGTACGGTAACCGGGACCTGACCGCA  237
               |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  324  ---AGCACCGAGAAGTCCGCGTGAAGTGCGTGAAGGCTCTGAAAGGGCTGTACGGTAACCGGGACCTGACCGCA  394

Query  238  CGCCTGGAGCTCTTCACTGGCCGCTTCAAGGACTGGATGGTTTCCATGATCATGGACAGAGAGTACAGTGTGGC  311
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  395  CGCCTGGAGCTCTTCACTGGCCGCTTCAAGGACTGGATGGTTTCCATGATCATGGACAGAGAGTACAGTGTGGC  468

Query  312  AGTGGAGGCCGTCAGATTACTGATACTTATCCTTAAGAACATGGAAGGGGTGCTGATGGACGTGGACTGTGAGA  385
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  469  AGTGGAGGCCGTCAGATTACTGATACTTATCCTTAAGAACATGGAAGGGGTGCTGATGGACGTGGACTGTGAGA  542

Query  386  GCGTCTACCCCATTGTG---------------------------------------------------------  402
            |||||||||||||||||                                                         
Sbjct  543  GCGTCTACCCCATTGTGTAGGCCTCTAATTGAGGCCTGGCCTCTGCTGTGGGTGAATTTCTGTACTGGAAACTT  616

Query  403  --------------------------------------------------------------------------  402
                                                                                      
Sbjct  617  TTCTACCCTGAGTGCGAGATAAGAACGATGGGTGGAAGAGAGCAACGCCAGAGCCCAGGTGCCCAGAGGACTTT  690

Query  403  --------------------------------------------------------------------------  402
                                                                                      
Sbjct  691  CTTCCAGCTTCTGCTGTCCTTCTTTGTGGAGAGCAAGCAAATCGCAGTCTTCTCCAGGCTGACAAGGCGAAGGG  764

Query  403  --------------------------------------------------------------------------  402
                                                                                      
Sbjct  765  CATGGCTTCGAAGTGCAAAAGAGTCATCATGAAACATCATGAATCATGAATCATTAGGCGTCTTCCCTTCGCTC  838

Query  403  --------------------------------------------------------------------------  402
                                                                                      
Sbjct  839  CCCACTTTTTTTTTTTTTTTTTTGAGACTGAGTCTCGCTCTGTTGCCCAGGCTGGAGTACAGTGGTGCGATCTT  912

Query  403  --------------------------------------------------------------------------  402
                                                                                      
Sbjct  913  GGCTCACTGCAACCTCTGCCTCCTGGGTTCAAGCGATTCTCCTGCCGTAGCCTCCTGAGTAGCTGGGATTACAG  986

Query  403  --------------------------------------------------------------------------  402
                                                                                      
Sbjct  987  GTCCCCGCCACCACACCTGGCTAATTTTCTTATTTATTTATTTATTTTTAGTAGAGATGGGGTTTTGCCATGTT  1060

Query  403  --------------------------------------------------------------------------  402
                                                                                      
Sbjct 1061  GGCCAGGCTGGTCTCGAACTCCTGACCTCAAGTGATCCACCTGCTTTGGCCTCCCAAAGTGCTGGGATTACAGG  1134

Query  403  --------------------------------------------------------------------------  402
                                                                                      
Sbjct 1135  CGTAAGCCATTGCACCCAACTCACTCCCCACCTTAAAACCAAAAGCGCTCTGGCTCTCAATGGAGACATCAAGC  1208

Query  403  --------------------------------------------------------------------------  402
                                                                                      
Sbjct 1209  CCTCCCTGCCCCTTCTCCCTCCCCTTTCAGAGAATCTCCAGGAATTTCTGCCATTGTGCAGGGAGCAATTGAAA  1282

Query  403  --------------------------------------------------------------------------  402
                                                                                      
Sbjct 1283  AATCAGTTAGTTCAGCTGGGTGCAGTGGCTCATGTCTGTAATCCCAGCACTTTGGGAGGCTGAGGCGGGCAGAT  1356

Query  403  --------------------------------------------------------------------------  402
                                                                                      
Sbjct 1357  CACCTGAGGCCAGGAGTTGGAGACCAGCCTGGCCAGCACAGTGAAACCCCGTCTCTACTAAAAATACAAAAAAT  1430

Query  403  --------------------------------------------------------------------------  402
                                                                                      
Sbjct 1431  TAGCCGGGCGTGGTGATGGGCACCTGTAATCCCAGCTACTCTGGAGGCTGAGGCAGGAGAATGGCGTGAACCTG  1504

Query  403  --------------------------------------------------------------------------  402
                                                                                      
Sbjct 1505  GGAGGTGGAGCTTGCAGTGAGCCGAGACTGCAGCATTGCACTCCAGCCTGCGCAACAAGAGTGAAACTGTCTCA  1578

Query  403  --------------------------------------------------------------------------  402
                                                                                      
Sbjct 1579  AAAAACAAAACAAAACAAAACACAAAAAGAAAGAAAAAAGGAAAAATCAGTTAGTTCGATTATTAGAAGACTAG  1652

Query  403  --------------------------------------------------------------------------  402
                                                                                      
Sbjct 1653  ATTATTGCTCAGCAGTAACCACTCCTTTCCCACAAACTCCCCTCTCTAGGAGGAATGTACCTCCCCACCCATTC  1726

Query  403  --------------------------------------------------------------------------  402
                                                                                      
Sbjct 1727  CTGTTAGGCTTGGCCAGGTGAATCGCTTTGGCCAATAGAATGTAACTGACAAGGTGAGCAGAGATTTGCAGTGG  1800

Query  403  --------------------------------------------------------------------------  402
                                                                                      
Sbjct 1801  GCTTGTGCTTGGTGCTGGTCCTCCGGGGCTCCTGCCTTTAGCCAGGGGAAGCACACTCCCCAGCCCCTCCTTAG  1874

Query  403  --------------------------------------------------------------------------  402
                                                                                      
Sbjct 1875  CCCTCTGGCCCTGGGGAGAATGAGAGGCATGTGGCACAGTCCTGGACCCAGCCGTGGCTGGGAGCAAGCCTGGA  1948

Query  403  --------------------------------------------------------------------------  402
                                                                                      
Sbjct 1949  AGCTTGAGCGAGAGATAAATGCTTGGTCTTTTTGTTTGAGACTAAGTCTCGCTCTATCGCCCAGGCTGGAGTGC  2022

Query  403  --------------------------------------------------------------------------  402
                                                                                      
Sbjct 2023  AGTGTGGCACAATCTCAGCTCATTGCAACCTCCACCTCCCAGGTTCAAGCTATTCTCCTGCTTCAGCCTCCCAA  2096

Query  403  --------------------------------------------------------------------------  402
                                                                                      
Sbjct 2097  GTAGCTGGGACTACAGCCAAATTGGAAGACCCACTTCTCTGGACTGGATGCTGCATTGAATTGAGCAAAGGAAC  2170

Query  403  --------------------------------------------------------------------------  402
                                                                                      
Sbjct 2171  TGAGTGCCCGGGGAGCTCAAAGGGAAGCAGCCCAGCCTTCCTTCCGGGGCAGAGCAGTGGTGGGGACCTGTTTC  2244

Query  403  --------------------------------------------------------------------------  402
                                                                                      
Sbjct 2245  CAGCTGCTTGTGCCCCCCACTTCATGGAGGAGGGACCAGGGATCCTCAGAGGAGAGGGTGATGTTTGACAGTGG  2318

Query  403  --------------------------------------------------------------------------  402
                                                                                      
Sbjct 2319  CTGCCTGCCCTGAAAATCGCCCTTGTCTGTCCAGCCTGGCCTGAATTTCACCCACATCAACCCACATGGGATAC  2392

Query  403  --------------------------------------------------------------------------  402
                                                                                      
Sbjct 2393  TTTATTTATTTATTTATCTATTTATTTATTTATTTATTTATTTTAGAGCCAGGGTCTCACCCTGTGGCCCAGGC  2466

Query  403  --------------------------------------------------------------------------  402
                                                                                      
Sbjct 2467  TGGAGTGCCGTGGTGCTATCATAGCTCACTGCAGCCTCAAACTCCTGGGCTCAAGTGATCCTCCCGCCTCAGCC  2540

Query  403  --------------------------------------------------------------------------  402
                                                                                      
Sbjct 2541  TCCAGAGTAGCTGGGACTACAGGAACACACCACTGTGCCTGGCTTATTTTTCTTTTTTTTTTTGGTAGAGATGG  2614

Query  403  --------------------------------------------------------------------------  402
                                                                                      
Sbjct 2615  GGGTCTCTCTATGTTGCCCAGGCTGGTCTCAAACTCCTGGCCTCAAGTGATCCTCCTGCCTCGGCCTCCCAAAG  2688

Query  403  --------------------------------------------------------------------------  402
                                                                                      
Sbjct 2689  TACTGGGATTACAGAATCGGCTCCCAGACACCTGCCACTCGTGAATGCATCTGATAAACTCACTCACACTGAGG  2762

Query  403  --------------------------------------------------------------------------  402
                                                                                      
Sbjct 2763  CCTTGGGGACTGAGAGTGCGATGACATGGATCCTGCGGACAAACCGCCCCAGGGCGTACCTAGCACCGAAGCAT  2836

Query  403  --------------------------------------------------------------------------  402
                                                                                      
Sbjct 2837  CAGGCGCCACTAGGTCTCCAGCTCCTTCTCGGATGACGTCCTTCAGCACGCCCCGGTCCCCCGAGATGTCCAGC  2910

Query  403  --------------------------------------------------------------------------  402
                                                                                      
Sbjct 2911  ATCCTCTGACTTAACCGCTCGTACAGGGACTGATGGAGAATGAAAGCCAGGCCTCAGAGCCGCAGACCCACCCG  2984

Query  403  --------------------------------------------------------------------------  402
                                                                                      
Sbjct 2985  GCCACCCCTCAGCGTCTACGCCCCCACGTCTGGGCCCTCACCTGGCCGGGGGCGTCGTCCCCTTCCAGGACTCC  3058

Query  403  --------------------------------------------------------------------------  402
                                                                                      
Sbjct 3059  CTGGTTTAACGCGCTTCCCCCCATGTCCTAGCTGCCCTCCCTGTGGCGTGAGCCTTCGGCCTGGTGCGCCCCGC  3132

Query  403  --------------------------------------------------------------------------  402
                                                                                      
Sbjct 3133  TGCCCTTCCTGGCTGTGACTCTGGTGGGGTTCCGAAGGCCCCTTTATGCCCGGCAGACCCCTACCGACGGCGGC  3206

Query  403  --------------------------------------------------------------------------  402
                                                                                      
Sbjct 3207  ATTCCATTCTGGGGCCACGAGGAGGCACTCATCGTTTCGTTCCAACCGCCGCCAACGGCCCTGGCCCTCGCGAG  3280

Query  403  --------------------------------------------------------------------------  402
                                                                                      
Sbjct 3281  CTCTGGAACTACAGAGGTCGCACGAGGCTCGCTCTGAGCCCAGGCTGGAGTTCAGTGATGGATCTCAGCTCACT  3354

Query  403  --------------------------------------------------------------------------  402
                                                                                      
Sbjct 3355  GCAGCCGCCACCTCCTGGGCTCAAGAGATCCTCCTGCCTCGGCCTCCCAAGTAGCTGGGATTACAGACGTGCAC  3428

Query  403  --------------------------------------------------------------------------  402
                                                                                      
Sbjct 3429  CACCAGGCCCAGCTAATTTATTTTTTAGTTTTTAATTTGCTGGTAAGATGGTTTGTAGCTTTGTTGCCTAGGCT  3502

Query  403  --------------------------------------------------------------------------  402
                                                                                      
Sbjct 3503  GGTCTTGAACTCCTGGCTTCAAGCGATCCTCCAGTCTTGACCTCCCAAAGTGCTGGGATTATAGGCGTAGGCTA  3576

Query  403  --------------------------------------------------------------------------  402
                                                                                      
Sbjct 3577  CAGCCAACTTTCAATACTGCCCCATTGGGGGTTACGTTTCCAACACATGAAATTAGGAGGATACATTCAAACCA  3650

Query  403  --------------------------------------------------------------------------  402
                                                                                      
Sbjct 3651  CAGCAGTATATTATGACCATAATATTCATTAACTGTGTAACAGGCTGGGCGCGGTGGCTCACACCTGTAATCCC  3724

Query  403  --------------------------------------------------------------------------  402
                                                                                      
Sbjct 3725  AGCACTTTGGGAGACCAGAGTGGGTAGATCACTCGAGGTCAGGAGTTTGAGACCAGCCTGGCCCACATGATGAA  3798

Query  403  --------------------------------------------------------------------------  402
                                                                                      
Sbjct 3799  ACCGCCTCTCTACTAAAAATACAAAAAATTAGCCGGTGTGGTGGCAGGCGCCTGTAACCTCAGCTACTTGGGAG  3872

Query  403  --------------------------------------------------------------------------  402
                                                                                      
Sbjct 3873  GCTGAGGCAGGAGAATCACTTGAATCCGGGAGGTGGAGGTGGCAGTGAGCCTGATTGCACCACTGCACTCCAGC  3946

Query  403  --------------------------------------------------------------------------  402
                                                                                      
Sbjct 3947  CTGGGCAACAAGAGCAAAACTCTGTCTCAATAAACAAACAAACAAACAAAACCTGTATAACAGAGTGTCATTGA  4020

Query  403  -------------------------------------------------  402
                                                             
Sbjct 4021  ATTTCTAAACGTTGAAAGACTTCACATTAAAAAAAAACTCACAATTTAA  4069

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