Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_10239
- Subject:
- NR_003654.2
- Aligned Length:
- 3951
- Identities:
- 456
- Gaps:
- 3495
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 TCCGGTGCTCAGTGGCTAGCCGAATAGCCGTGTTTGGGACCTGGGCTCGGGCTTCTTGCGTCCCCGCTAAGAAC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 ATGTCACGGGGCCGAATCGTCCGTATTCTCTCAGCTTCAAGCTCCTCTACTTTTCAACCAGGTCACTAGCCCTT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GACTCCTCTTATCAAACTTCCGGAACTGCCACCCCACCAGTGACTCCACAGGCACCAGGGCATGCAACAGGGCT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GGGACAGGAAGGCTCTCTTCTTCACCTCAAGCCTGCTGGGCTAACACTTGCGATTTTTACTAGAGTTAACTTTG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TAATGTATGTCTCTGACTCTAGAATTTCAAGAGAAGTTCCACTTAGTGACTCCTAAGTGGAAGTTCTAAGATGG 370
Query 1 ----------------------------------------------------------------------ATGG 4
||||
Sbjct 371 CTTCCCAGTGAGGTGATGAAGAGGTTTGAGCTTTAGAGTGCGGTTGCAAAGCTCTTCTCTGACCTGAACAATGG 444
Query 5 CTGTAGCTGTGGACCAACAAATCCAGACTCCTTCAGTACAAGATCTCCAAATAGTTAAACTGGAAGAAGATTCC 78
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 CTGTAGCTGTGGACCAACAAATCCAGACTCCTTCAGTACAAGATCTCCAAATAGTTAAACTGGAAGAAGATTCC 518
Query 79 CACTGGGAGCAGGAAATTTCCCTTCAAGGGAATTACCCTGGACCAGAGACATCCTGCCAGAGCTTTTGGCATTT 152
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 CACTGGGAGCAGGAAATTTCCCTTCAAGGGAATTACCCTGGACCAGAGACATCCTGCCAGAGCTTTTGGCATTT 592
Query 153 CCGTTACCAAGAAGCATCACGACCCCGAGAGGCCCTCCTCCAGCTCCAGAAGCTCTGTTGTCAGTGGCTAAGGC 226
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 CCGTTACCAAGAAGCATCACGACCCCGAGAGGCCCTCCTCCAGCTCCAGAAGCTCTGTTGTCAGTGGCTAAGGC 666
Query 227 CAGAGAAGTGTACAAAAGAGCAGATCCTGGAGTTGCTGGTCCTAGAACAGTTCCCGACTGTCCTTCTCCAGGAG 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 CAGAGAAGTGTACAAAAGAGCAGATCCTGGAGTTGCTGGTCCTAGAACAGTTCCCGACTGTCCTTCTCCAGGAG 740
Query 301 ATCCAGATCTGGGTCAGACAGCAGCATCCGGAGAGTGGAGAGGAGGCAGTGGCCCTGGTGGAAGACTTGCAGAA 374
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 ATCCAGATCTGGGTCAGACAGCAGCATCCGGAGAGTGGAGAGGAGGCAGTGGCCCTGGTGGAAGACTTGCAGAA 814
Query 375 AGAACCTGGAAGACAGAGGCTGGAGCCCTGCCTGATGTGGCTCTGGGAATTCCTGCAGAGAAGAGCAGGGGTGG 448
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 AGAACCTGGAAGACAGAGGCTGGAGCCCTGCCTGATGTGGCTCTGGGAATTCCTGCAGAGAAGAGCAGGGGTGG 888
Query 449 CCAGGAGA------------------------------------------------------------------ 456
||||||||
Sbjct 889 CCAGGAGATAGTGAGCAGCTCCCAGGAGGCATGGAGGGATCCAGAACCTGGACTGAAGAACCACCTAGAAATAA 962
Query 457 -------------------------------------------------------------------------- 456
Sbjct 963 CTCAGCAGAATTCTGAAAATGAGGTCACGCTGGATTTTCCAATCCATAGGCCCAAAGTGAACTCCCACGTGGAG 1036
Query 457 -------------------------------------------------------------------------- 456
Sbjct 1037 TAGGATGAAAACCCACAGCATCTAGATCTTCAAATTCTGGAGAAAAAGAGAGTGTGAAAGACTGCTCAGTGGCT 1110
Query 457 -------------------------------------------------------------------------- 456
Sbjct 1111 GGGGTGAGAGTCAAGTCTGGCCAGGTGCTAATCTGGAGAAAAGCCAAGACCTGGAGCGAGCTGGAGTGGCAGGC 1184
Query 457 -------------------------------------------------------------------------- 456
Sbjct 1185 CCTGGAGGATGAGAAGGTGGCAGGAGTGCACTGGGGATACAAAGAAACCAAGATTTTTCTGGGAATTCTCAGAG 1258
Query 457 -------------------------------------------------------------------------- 456
Sbjct 1259 GCCTGGATCCACGAAAAACTCCGCACCTGCCATCGAAACCACCAGGTGTACCGGATTATGGCTGAGCAGCTGTG 1332
Query 457 -------------------------------------------------------------------------- 456
Sbjct 1333 AGAACATGGCTTCCTGTGGACCCTGGAGCAATGTTGCTATCGGTTCAAAAACCTCCTGACCGACTACTGCAAAG 1406
Query 457 -------------------------------------------------------------------------- 456
Sbjct 1407 CCAGGAGCACCTACACACCAGGCACCAGTGTCTTCTATGATGAGATGGATGCCCTGTTGAGTCTTGGGGCACTT 1480
Query 457 -------------------------------------------------------------------------- 456
Sbjct 1481 TCTAACACCTTTGATGCCTTAGAGGTGGTAGGAGGCCTTCTTTGGGATTGAGAGGATTCCAAAGGGAACCAGGG 1554
Query 457 -------------------------------------------------------------------------- 456
Sbjct 1555 CATAGCACTAGAAGATGTGGCGGGATGGTAATGAAATAGTGGAGGAGTCTCAAGAGGAATCCTGGAGGCTTGGT 1628
Query 457 -------------------------------------------------------------------------- 456
Sbjct 1629 CCCCAGGCCTTGAGGTGGAATCCCAGTGGCAACTCTCCCCCACAATGGACCTCAGAGCAGTGGGAGCGACGCAG 1702
Query 457 -------------------------------------------------------------------------- 456
Sbjct 1703 TCCTGTGGGAAGCATTCAGGCTCAGAATCAGGAGATGTGATTATTGTCCTGGCTCTGTTATGACTAATTTGGGT 1776
Query 457 -------------------------------------------------------------------------- 456
Sbjct 1777 CTGGAATGGCCTCATCGGGGGAAAAATTGGTGACAACTTTAAGAAATACTGTTTATATCCCGTCCTCAAATATT 1850
Query 457 -------------------------------------------------------------------------- 456
Sbjct 1851 GCTTGACTCAACCCTCTACTGAACCAGTAGTCCAGGGTGGCTCACAAAGACCACTTTGAGGCTCTTGCTCTGCT 1924
Query 457 -------------------------------------------------------------------------- 456
Sbjct 1925 CTTTAGCCAAGGAGTCTCCCTTCCTGCCTTCAGTAACAACATTACAGGAAGAGAGGAGAGAAAGGTAGGAGTTA 1998
Query 457 -------------------------------------------------------------------------- 456
Sbjct 1999 AAGATCCAGTCATTTGTTTCCATCTAAAGTGCCCTATAAGCCGGGCATGGTGGCGCAAGCCTGTAGTCCCAGCT 2072
Query 457 -------------------------------------------------------------------------- 456
Sbjct 2073 ACTCGGGAGGCTGGGGCAGGAGAATCACTTGAGCCCAGGAGTTGGAGGCCGCAGTGAGCTGTGATCATGCCACT 2146
Query 457 -------------------------------------------------------------------------- 456
Sbjct 2147 GCATTCCAGCCTGGGCGACAGAGTGAGACCCAGACTCAGCTGAAAAATAATAATATTATTAAAAGAATTTAAAA 2220
Query 457 -------------------------------------------------------------------------- 456
Sbjct 2221 TAAAGTGTTCCATAGATGTGAACCCTGCGTAGATTATACACACCAGTCTGCCATTTAAAAGGTTTGTTGTTCTT 2294
Query 457 -------------------------------------------------------------------------- 456
Sbjct 2295 GGGCAACCTCTTTAAATACCCTTAGCCTCCATTTTCTCATCTGGACAGTGGACATTGTGATGGTTTCTACCTCC 2368
Query 457 -------------------------------------------------------------------------- 456
Sbjct 2369 CTGGGCTGTTATGAGGATCCTGACACAGTATTAGCACTTGGCAAACGTTAGTTTTCATTATCATCATCATTATA 2442
Query 457 -------------------------------------------------------------------------- 456
Sbjct 2443 ATTATTATGAAAATAGATAAGGGCATTATCCTGTACCCTCAAAGGAGTAAAAGGGGGAAAATGAGTCATTAAAC 2516
Query 457 -------------------------------------------------------------------------- 456
Sbjct 2517 TTTCTCTTCTGGGAACTAGACCTTCTTGAGAGGCACTATCATTCTCATTTCACCTGTCACTTCCAGACATGGGA 2590
Query 457 -------------------------------------------------------------------------- 456
Sbjct 2591 GCAGAAAGTGAATTTCAGAACTCCATGTCCCCTCCTGCTTTTCTCTGAGCAGGACTTCCAGTTCCCCAGCCAGA 2664
Query 457 -------------------------------------------------------------------------- 456
Sbjct 2665 TGGGGTCACAATGCTGCAGAAAAGTGAAGAGCTTTGGAATGAAGATCTCCCGGACTTCAAGGAGATTCAGAAAA 2738
Query 457 -------------------------------------------------------------------------- 456
Sbjct 2739 CGTCCAGTGCAGGTGGGAAATGAATGGGAGCTAGCATTCCACCAACAAAGTCAGCCCTGGGATTCTAAACTCGG 2812
Query 457 -------------------------------------------------------------------------- 456
Sbjct 2813 ACAAGCCAGCACTGGTTAAGGGCTGAGGGGAACCAGGCACTCAGTGCACCCAGTTTACTATTCTGTGGTGTGGA 2886
Query 457 -------------------------------------------------------------------------- 456
Sbjct 2887 AAGCACAGGACTTGAGAAGCAGGTGGCACCCAGGAAAGCCTGTTCCCCTAAGTAAGTTTGAACTTTAGTTACTT 2960
Query 457 -------------------------------------------------------------------------- 456
Sbjct 2961 GAAAAAAGGTATAACTGAATTATGAGTGTTTATGATTTTATCTTTATTTTATTTTTTTTGAGATGGAGTCTCAC 3034
Query 457 -------------------------------------------------------------------------- 456
Sbjct 3035 CCTGTCACCCAGGCTGGAATGCAGTGGCACAATCTCGGTTCACTGCAGCCTCTACCTCTCAGGTTCAAGCAATT 3108
Query 457 -------------------------------------------------------------------------- 456
Sbjct 3109 CTCCTGCCTCACCCTCCTGAGTAGTGGGGATTACAGGTGTGCCACCACCATGCCCGTCTCTAATTTTTATATTT 3182
Query 457 -------------------------------------------------------------------------- 456
Sbjct 3183 TTAGTAGAGACGGGGTTTCACCATGTTGGCCAGGCTGGTCTTGAACTCCTGACCTCAAGTGATCCACCCACCTT 3256
Query 457 -------------------------------------------------------------------------- 456
Sbjct 3257 GGCCCCCCACAAAGTGCTGGGATTACAGGCGTGAGCCACTGTGCCTGGTCTATCTTTAAATTCCTATCTGAATT 3330
Query 457 -------------------------------------------------------------------------- 456
Sbjct 3331 TGTTTAGGTTTTTTAAATAAAAATCTTTCTTTTTTTTTAGAGACAGGGGTTCACCATGGTGCCCAGGCTGATCT 3404
Query 457 -------------------------------------------------------------------------- 456
Sbjct 3405 CGAACTCCTCCTGGACTCAAGCTATCCTCCCACCTCAGCCTCCCAAAGTACTGGGATTACAGACATGAGCCACA 3478
Query 457 -------------------------------------------------------------------------- 456
Sbjct 3479 TGCTTGACCTGAATTTTAACTGCAGTTAATTATCACTTAACCAGCGAATTCACACAGGAGAAATCCCCTGGCCG 3552
Query 457 -------------------------------------------------------------------------- 456
Sbjct 3553 GGCGCGGTGGCTCACACCTGTAATCCCAGCTCTTCGGGAGGCCGAGGTGGGTAGATCACAAGGTCAAGAGATCA 3626
Query 457 -------------------------------------------------------------------------- 456
Sbjct 3627 AGACCATTCTGGCCAACATGGTGAAACTCCGTCTGTACCAAAAATACAAAAATTACCTGGGCATGGTGGTACGT 3700
Query 457 -------------------------------------------------------------------------- 456
Sbjct 3701 GCCTGTAATCCCAGCTACTTGGCAGGCTGAGGCAGGAGCATTGCTTGAACCCATGAGGTGGAGGTTGCAGTGAG 3774
Query 457 -------------------------------------------------------------------------- 456
Sbjct 3775 CCGAGATCACGCCACTGCACTCAAGCCTGGGTGACAGAGCAAGACTCCATCTCTACTACAAAAAAAAAAAAAAA 3848
Query 457 -------------------------------------------------------------------------- 456
Sbjct 3849 AAAAATTCAACCACCTTAGGAAGCCTCTCATTTATGTATTTCTAGCATGTAATTAGTGTTGCACATGGGAAGGG 3922
Query 457 ----------------------------- 456
Sbjct 3923 CTAATAGATGCTGACAGAGTGAACAACTT 3951
