Nucleotide Global Alignment

Description

Query:
ccsbBroad304_10303
Subject:
NR_160272.1
Aligned Length:
3606
Identities:
167
Gaps:
3414

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  GTAACGCTCTAACGTTAGAGCAGCTAACGGCTCTGCTCAGAATTTCTCCCGACAGAGGCCGGAGTGTTCAAGAG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  CTTGGCGATACAGAAATTTCTGCTGGTGTTGGGGCGGGTGCGGGAACTGAAGACGGGCGAGTGCGAGCCGGGGG  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  CGGGTGCTGGGGAAGGGTAAGCGGGAAGCGAGGGCGAGGGGTAGGGGCTGGGGAAGGGCGAGCGGGAGGCGCGG  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  GCTCTCTCTAGCAGGGGGCTGCAGCCATGAAGAGGCTCTTAGCTGCCGCTGGCAAGGGCGTGCGGGGCCCGGAG  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  CCCCCGAACCCCTTCAGCGAACGGGTCTACACTGAGAAGGACTACGGGACCATCTACTTCGGGGATCTAGGGAA  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  GATCCATACAGCTGCCTCCCGGGGCCAAGTCCAGAAGCTGGAGAAGATGACAGTAGGGAAGAAGCCCGTCAACC  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  TGAACAAAAGAGATATGAAGAAGAGGACTGCTCTACACTGGGCCTGTGTCAATGGCCATGCAGAAGTAGTAACA  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  TTTCTGGTAGACAGAAAGTGCCAGCTTAATGTCCTTGATGGCGAAGGGAGGACACCTCTGATGAAGGCTCTACA  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  ATGCGAGAGGGAGGCTTGTGCAAATATTCTCATAGATGCTGGTGCTGATCTAAATTATGTAGATGTGTATGGCA  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  ACACGGCTCTCCATTATGCCGTTTATAGTGAGAATTTGTTAATGGTGGCAACACTGCTGTCCTATGGTGCAGTC  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  ATCGAGGTGCAAAACAAGGCTAGCCTCACACCCCTTTTACTGGCCATACAGAAAAGAAGCAAGCAAACTGTGGA  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  ATTTTTACTAACAAAAAATGCAAATGCAAACGCATTTAATGAGTCTAAATGCACAGCCCTCATGCTTGCCATAT  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  GTGAAGGCTCATCAGAGATAGTCGGCATGCTTCTTCAGCAAAATGTTGACGTCTTTGCTGAAGACATACATGGA  962

Query    1  ----------------ATGCAAATGCAAATGGAGTTGATAAGTTTAAATGCATTCATCAACAACTTTTGGAATA  58
                            ||||...|||...|||||         ||||.|.||||||||||||||||||||||.|
Sbjct  963  ATAACTGCAGAACGTTATGCTGCTGCTTGTGGAG---------TTAATTACATTCATCAACAACTTTTGGAACA  1027

Query   59  TAAACAAAAGATATCTAAAAATTCTCAAAATAGTAATCCAGAAGGAACATCTGAAGGAACACCTGACGAGGCTG  132
            ||.||.|||..||.||||||||.|||||||||..||||||||||||||||||..||||||||||||.|||||||
Sbjct 1028  TATACGAAAATTACCTAAAAATCCTCAAAATACCAATCCAGAAGGAACATCTACAGGAACACCTGATGAGGCTG  1101

Query  133  CACCCTTGGCGGAAAGAACACCTGACACGGCTGAAAGCTTGGTGGAAAGAACACCTGACGAATAGGATACAG--  204
            |||||||||||||||||||||||||||||||||||||||||.||||||.|||||||||||   |||.|.||.  
Sbjct 1102  CACCCTTGGCGGAAAGAACACCTGACACGGCTGAAAGCTTGCTGGAAAAAACACCTGACG---AGGCTGCACGC  1172

Query  205  --------------------------------------------------------------------------  204
                                                                                      
Sbjct 1173  TTGGTGGAGGGAACGTCTGCCAAAATTCAATGTCTGGGGAAAGCAACATCTGGAAAGTTTGAACAGTCAACAGA  1246

Query  205  --------------------------------------------------------------------------  204
                                                                                      
Sbjct 1247  AGAAACACCTAGGAAAATTTTGAGGCCTACAAAAGAAACATCTGAGAAATTTTCATGGCCAGCAAAAGAAAGAT  1320

Query  205  --------------------------------------------------------------------------  204
                                                                                      
Sbjct 1321  CTAGGAAGATCACATGGGAGGAAAAAGAAACATCTGTAAAGACTGAATGCGTGGCAGGAGTAACACCTAATAAA  1394

Query  205  --------------------------------------------------------------------------  204
                                                                                      
Sbjct 1395  ACTGAAGTTTTGGAAAAAGGAACATCTAATATGATTGCATGTCCTACAAAAGAAACATCTACAAAAGCAAGTAC  1468

Query  205  --------------------------------------------------------------------------  204
                                                                                      
Sbjct 1469  AAATGTGGATGTGAGTTCTGTAGAGCCTATATTCAGTCTTTTTGGCACACGGACTATTGAAAATTCACAGTGTA  1542

Query  205  --------------------------------------------------------------------------  204
                                                                                      
Sbjct 1543  CAAAAGTTGAGGAAGACTTTAATCTTGCTACCAAGATTATCTCTAAGAGTGCTGCACAGAATTATACGTGTTTA  1616

Query  205  --------------------------------------------------------------------------  204
                                                                                      
Sbjct 1617  CCTGATGCTACATATCAAAAAGATATCAAAACAATAAATCACAAAATAGAAGATCAGATGTTCCCATCAGAATC  1690

Query  205  --------------------------------------------------------------------------  204
                                                                                      
Sbjct 1691  CAAACGAGAGGAAGATGAAGAATATTCTTGGGATTCTGGGAGTCTCTTTGAGAGTTCTGCAAAGACTCAAGTGT  1764

Query  205  --------------------------------------------------------------------------  204
                                                                                      
Sbjct 1765  GTATACCTGAGTCTATGTATCAGAAAGTAATGGAGATAAATAGAGAAGTAGAAGAGCTTCCTGAGAAGCCATCT  1838

Query  205  --------------------------------------------------------------------------  204
                                                                                      
Sbjct 1839  GCCTTCAAGCCTGCCGTTGAAATGCAAAAGACTGTTCCAAATAAAGCCTTTGAATTGAAGAATGAACAAACATT  1912

Query  205  --------------------------------------------------------------------------  204
                                                                                      
Sbjct 1913  GAGAGCAGCTCAGATGTTCCCATCAGAATCCAAACAAAAGGACGATGAAGAAAATTCTTGGGATTCTGAGAGTC  1986

Query  205  --------------------------------------------------------------------------  204
                                                                                      
Sbjct 1987  CCTGTGAGACGGTTTCACAGAAGGATGTGTATTTACCCAAAGCTACACATCAAAAAGAATTCGATACCTTAAGT  2060

Query  205  --------------------------------------------------------------------------  204
                                                                                      
Sbjct 2061  GGAAAATTAGAAGCCTACCTGTGGAAGGAAAGTTTCTCTTCCAAATAAAGCCTTAGAATTAAAGGACAGAGAAA  2134

Query  205  --------------------------------------------------------------------------  204
                                                                                      
Sbjct 2135  CATTCAAAGCAGAGTCTCCTGATAAAGATGGTCTTCTGAAGCCTACCTGTGGAAGGAAAGTTTCTCTTCCAAAT  2208

Query  205  --------------------------------------------------------------------------  204
                                                                                      
Sbjct 2209  AAAGCCTTAGAATTAAAGGACAGAGAAACACTCAAAGCAGAGTCTCCTGATAATGATGGTCTTCTGAAGCCTAC  2282

Query  205  --------------------------------------------------------------------------  204
                                                                                      
Sbjct 2283  CTGTGGAAGGAAAGTTTCTCTTCCAAATAAAGCTTTAGAATTGAAGGACAGAGAAACATTCAAAGCAGCTCAGA  2356

Query  205  --------------------------------------------------------------------------  204
                                                                                      
Sbjct 2357  TGTTCCCATCAGAATCCAAACAAAAGGATGATGAAGAAAATTCTTGGGATTTTGAGAGTTTCCTTGAGACTCTC  2430

Query  205  --------------------------------------------------------------------------  204
                                                                                      
Sbjct 2431  TTACAGAATGATGTGTGTTTACCCAAGGCTACACATCAAAAAGAATTCGATACCTTAAGTGGAAAATTAGAAGA  2504

Query  205  --------------------------------------------------------------------------  204
                                                                                      
Sbjct 2505  GTCTCCTGATAAAGATGGTCTTCTGAAGCCTACCTGTGGAAGGAAAGTTTCTCTTCCAAATAAAGCCTTAGAAT  2578

Query  205  --------------------------------------------------------------------------  204
                                                                                      
Sbjct 2579  TAAAGGACAGAGAAACACTCAAAGCAGAGTCTCCTGATAAAGATGGTCTTCTGAAGCCTACCTGTGTAAGGAAA  2652

Query  205  --------------------------------------------------------------------------  204
                                                                                      
Sbjct 2653  GTTTCTCTTCCAAATAAAGCCTTAGAATTAAAGGACAGAGAAACATTAAAAGCAGCTCAGATGTTCCCATCAGA  2726

Query  205  --------------------------------------------------------------------------  204
                                                                                      
Sbjct 2727  ATCCAAACAAAAGGATGATGAAGAAAATTCTTGGGATTTTGAGAGTTTCCTTGAGGCTCTCTTACAGAATGATG  2800

Query  205  --------------------------------------------------------------------------  204
                                                                                      
Sbjct 2801  GGTGTTTACCCAAGGCTACACATCAAAAAGAATTCGATACCTTAAGTGGAAAATTAGAAGATTTCAGGCCGGGC  2874

Query  205  --------------------------------------------------------------------------  204
                                                                                      
Sbjct 2875  ACTGTGGTTCACGCCTGTAATCCCAGCCCTTTGGGAGGCAGAGGCATGCGGATCACGAGGTCAGCAGATCGAGA  2948

Query  205  --------------------------------------------------------------------------  204
                                                                                      
Sbjct 2949  CCATCCTGGCTAACATGGTGAAACCCCGTCTCTATGAAAAAATACAAAAAATTAGCCAAGCATGGTGGTGGGTG  3022

Query  205  --------------------------------------------------------------------------  204
                                                                                      
Sbjct 3023  CCTCTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGTGAGAACCCATGAGGCAGAGATTGCAGTGAGCC  3096

Query  205  --------------------------------------------------------------------------  204
                                                                                      
Sbjct 3097  AAGATCATGCACCTACACTCCAGCCTGGGTGACAGGGCCAGACTCTGTGAAAAAAAAAAAAAAAAAAGAATTTA  3170

Query  205  --------------------------------------------------------------------------  204
                                                                                      
Sbjct 3171  TTTATTGTGGCACTATTCACAACAGCAAAGACTTGGAACCAAACCAAATGTCCAACAACGCTAGACTGGATTAA  3244

Query  205  --------------------------------------------------------------------------  204
                                                                                      
Sbjct 3245  GAAAGTATGGCACATATACACCATGGAACACTACGCAGCCATAAAAAATGATAAGTTCATGTCCTTTGTAGGGA  3318

Query  205  --------------------------------------------------------------------------  204
                                                                                      
Sbjct 3319  CATGAATGAAACTGGAAACCATCATTCTCAGCAAACTCTCGCAAGGACAAAAAACCAAACACTGCGTGTTCTCA  3392

Query  205  --------------------------------------------------------------------------  204
                                                                                      
Sbjct 3393  CTCATAGGTGTGAATTGAACAATGAGAACACATGGACACAGGAAGGGGAACATCACACTCCGGGGACTGTTGTG  3466

Query  205  --------------------------------------------------------------------------  204
                                                                                      
Sbjct 3467  GGGTTGGAGGAGGGATAGCATTAGGAGATATACCTAATGCTAAATGACGAGTTAATGGGAACCTGCACATTGTG  3540

Query  205  ------------------------------------------------------  204
                                                                  
Sbjct 3541  CACATGTACCCTAAAACTTAAAGTATAATATTAAAATAAAAAATAAAGAAAACA  3594

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