Nucleotide Global Alignment

Description

Query:
ccsbBroad304_10493
Subject:
NR_102301.2
Aligned Length:
4663
Identities:
541
Gaps:
4045

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  AGACCAGGAAGTGGATCCCGTGGAATGACGGTCACGCCGCGGCGGGCGGATTGACTTCTAAAGACTGTTGGTAC  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  GTGAGAAAGAAACCCAGAAGAGGAAGAGGAAAGCAAAGGAGTCAGGGATGGCTCTTCCTCAGTCCCTCTCATCT  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  CGCTTAGGTTCCGTCTCTCGTGACCCAGTGTCATGAACTTGGGAAGAGGCTGCACTGGGCAGGTCCTGGGAAGG  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  GCTCACACCCCGACATGGATGGACACGGGGTGAGGGTCCTGTGGTGTCAGTGCTCTTGGGCAGCAGGGATTGTT  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  CAGGGGCCACATCTGGATGCACTGTCAGCTCACTGTGGACCAGGATTGGAGCAGCTGCCAATGGGAGTCACGTA  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  TTAATATGCACGAAGTACGTGGGTCTATTGACATTCAGGGACGTGGCCATAGAATTCTCTCAGGAGGAGTGGAA  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  ATGCCTGGACCCTGCTCAGAGGACTTTATACAGGGACGTGATGCTGGAGAATTATAGGAACCTCGTCTCCCTGG  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  ATATCTCTTCCAAATGCATGTTGAAGACGTTGTCGTCAACAGGGCAAGGCAATACAGAAGTGATCCACACAGGG  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  ACATTGCACAGACAAGCAAGTCATCACATTGGAGAATTTTGTTTCCATGAAATTGAGAAAGACATTCATGGCTT  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  CGAGTTTCAGTGGAAAGAAGATGAAACAAATGGCCATGCAGCACCCATGACAGAAATCAAAGAGTTGGCTGGTA  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  GTACAGGCCAACATGATCAAAGGCATGCTGGAAACAAGCGTATTAAAGATCAGCTTGGATCAAGCTTTCATTTG  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  CATCTGCCTGAACCGCACATATTTCAGTCTGAAGGGAAAATTGGTAATCAAGTTGAGAAGTCTATCAACAATGC  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  TTCCTCAGTTTCAACATCCCAAAGAATTTGTTGTAGGCCCAAAACCCATATTTCTAATAAGTATGGAAATAATT  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  CCCTCCATTCTTCATTACTCACACAAAAATGGGAAGTACACATGAGAGAAAAATCTTTTGAATGTATACAGAGC  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  TTCAAATCCTTTAATTGCAGCTCACTCTTAAAAAAACATCAGATAATTCACTTAGAAGAGAAACAATGTAAATG  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  TGATGTATGTGGCAAGGTCTTTAATCAGAAGCGATACCTTGCCTGCCATCGTAGATGTCACACTGGTGAGAAAC  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  CTTACAAGTGTAATGAGTGTGGCAAGACCTTTGGTCATAATTCATCCCTCTTCATTCACAAAGCGCTTCATACT  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  GGAGAGAAACCTTATGAATGTGAAGAATGTGACAAAGTTTTCAGTCGCAAATCACACCTTGAAAGACATAAGAG  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  GATTCATACTGGAGAGAAACCATACAAATGTAAGGTTTGTGATGAGGCTTTCGCATATAATTCATATCTGGCAA  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  AACATACTATACTTCACACTGGAGAGAAACCTTACACATGTAATGAATGTGGCAAAGTTTTTAATCGACTATCA  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  ACCCTTGCACGCCATCATAGACTTCATACTGGAGAGAAACCTTACAAATGTGAAGAGTGTGACAAAGTTTTCAG  1554

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1555  TCGCAAATCACACCTTGAAAGACATAGGAGGATTCATAGTGGAGAGAAACCTTACAAATGTGAAGAATGTTGCA  1628

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1629  AAGTTTTCAGTCGCAAATCAAACCTGGAAAGACACAGGAGGATTCATACTGGAGAGAAACCATACAAATGTAAG  1702

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1703  GTTTGTGACAAGGCTTTCCAGAGGGATTCACACCTGGCACAACATCAGAGAGTTCATACTGGAGAGAAACCTTA  1776

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1777  CAAGTGTAATGAGTGTGGCAAGACCTTCGGTCAGACATCATCGCTTATAATCCATCGTAGGCTTCATACTGGAG  1850

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1851  AGAAACCTTACAAGTGTAATGAGTGTGGCAAGACCTTCAGTCAGATGTCATCCCTTGTATACCATCATAGGCTT  1924

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1925  CATAGTGGAGAGAAGCCTTAATAGTGTAATGAGTGTGGCAAGACCTTCCATCACAATTCAACCCTGTAAGTCAT  1998

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1999  AAGGCAATTCATACTGGAGAGAAACCTTACAAGCATAATGAATGTGGCAAGGTTTTTAATCAAAAAGCAACCTT  2072

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2073  TGCACATCACCATAGACTTCATACTGGAGAGAAACCTTACAAATGGGAGGAATGTGACAAAAGTTTTCAGTTGT  2146

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2147  AAATCAAACCTTAAAACACATAAGAAAATTCACATTGAAGAGAAACCATACAGAGGTAAGGTTTGTGACAAGGT  2220

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2221  TTTTGCATATAATGCATATCTGGCAAAACATACTAGAATTCACACTGGAGAGAAACTCATTATAAGTGTAATGA  2294

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2295  GTGTGGCAAGACCGTTGGTCAAAATTCACACCTTGTAATTAAAAGGTCAAAATTCACACCTTGTAATTCATAGT  2368

Query    1  ----------------------ATGAATGTGGCAAGGTTTTTAGTAGAAAAGCACACCTTGCATGTCATCATAG  52
                                  |||||||||.||.||||||||.|..|.||.|||||||||||.||||||||||
Sbjct 2369  GGAGAGAAACCTTACAAGCACAATGAATGTGACATGGTTTTTAATCAACAATCACACCTTGCAAGTCATCATAG  2442

Query   53  ACTTCATACTG--------TCT----------------------AAGGTTTCTAATCA----------------  80
            |||||||||||        |||                      |||.|||| |.|||                
Sbjct 2443  ACTTCATACTGCATAGAAATCTTACAAACGTGAACAATGTGACAAAGTTTTC-ATTCACAAATCCAGCTTCAAA  2515

Query   81  ---------------------------------------------------ACAA----------------TCA  87
                                                               ||||                |||
Sbjct 2516  TACATAGGAGAATTCACACTGGAGAAAAGCCATAGAAATGTAAGGTTTGTGACAAGGCTTTCGGGAATGATTCA  2589

Query   88  AACCTTGCACAACATCAGAGAGTTTATACTGGAGAGAAACCTTACAAGTGTAATGAGTGGGGCAAAGCCTTAAG  161
            .||.|.||||..|||...|||.||.|.|||||||||||||||||||||||.||||||||.||||||.||||.||
Sbjct 2590  CACGTGGCACCCCATACTAGAATTCACACTGGAGAGAAACCTTACAAGTGCAATGAGTGTGGCAAACCCTTTAG  2663

Query  162  TGGGAAGTCGTCACTTTTTTATCATCAAGCAATCCATGGTGTAGGGAAACTTTGCAAATGTAATGATTGTCACA  235
            ||||.||||..|||||.||.|.||||||||||||||||||.|||||||||||..|.||||||||||||||||||
Sbjct 2664  TGGGCAGTCACCACTTATTCACCATCAAGCAATCCATGGTATAGGGAAACTTGACTAATGTAATGATTGTCACA  2737

Query  236  AAGTCTTCAGTAATGCTACAACCATTGCAAATCACTGGAGAATCCGTAATGAAGACAGATCTTACAAGTGTAAT  309
            ||||.||||||||||||||||||||||||.||||.||||||||||..|.|||||  ||||||||||||||||||
Sbjct 2738  AAGTTTTCAGTAATGCTACAACCATTGCACATCATTGGAGAATCCACAGTGAAG--AGATCTTACAAGTGTAAT  2809

Query  310  AAATGTGGTAAAATTTTCAGACATCAATCATATCTTGCAGTTTATCAGCGAACTCATACTGGAGAGAAACCTTA  383
            ||||||||.|||.||||||||||||..||||..||||||.||.|...|.||||||||.||||||||||||||||
Sbjct 2810  AAATGTGGCAAATTTTTCAGACATCGTTCATGCCTTGCATTTCACTGGTGAACTCATGCTGGAGAGAAACCTTA  2883

Query  384  CAAATATCATGACTGTGGCAAGGTCTTCAGTCAAGCTTCATCCTATGCAAAACATAGGAGAATTCATACAGGAG  457
            .||||.||||||.||.||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||
Sbjct 2884  TAAATGTCATGATTGAGGCAAGGTCTTCAGTCAAGCTTCATCCTATGCAAAACATAGGAGGATTCATACAGGAG  2957

Query  458  AGAAACCTCACAAGTGTGATGATTGTGGCAAAGTCTTGACTTCACGTTCACACCTCATTAGACATCAGAGAATC  531
            |||||||||||||||||||||||||||||||||..||.|||||||.||||||||||||||||||||||||||||
Sbjct 2958  AGAAACCTCACAAGTGTGATGATTGTGGCAAAGCGTTTACTTCACATTCACACCTCATTAGACATCAGAGAATC  3031

Query  532  CATACTGGACATAAATCTTACAAATGTCTTAAGTGTGGCAAGGTCTTCAGTCTGTGGGCACTCCATGCAGAACA  605
            |||.|||||||.||||||||||||||||.|.|||||||.|.|||||||||||...||.||||||.||||||.||
Sbjct 3032  CATGCTGGACAGAAATCTTACAAATGTCATCAGTGTGGAAGGGTCTTCAGTCCAAGGTCACTCCTTGCAGACCA  3105

Query  606  TCAGAAAATTCATTTT----------------------------------------------------------  621
            |||||.|||||.||||                                                          
Sbjct 3106  TCAGACAATTCCTTTTGGAGACAGTTGTTTCAAATGCAGTGAGTATAGCAAACCATCAAGCATTAATTGACATT  3179

Query  622  --------------------------------------------------------------------------  621
                                                                                      
Sbjct 3180  AGAGTCAAATCAGCCTTGACCTGAGTTTGTTGATTTAACATTGATTTCAAGCATTAATTGCCATTAAACTGTTT  3253

Query  622  --------------------------------------------------------------------------  621
                                                                                      
Sbjct 3254  ATGTTAAGAGGATTGCACTGGGGGCCATGGCTCATGCCTGTAATTCCAGCACTTTGAGAGGCAAAGACAGGTAG  3327

Query  622  --------------------------------------------------------------------------  621
                                                                                      
Sbjct 3328  GTCACTGGAGCTCACGAGTTTGAGAACAGCCTAGCCAACAGATGGGAGCTACTTTTCCCAGCCTTTATTTTCTT  3401

Query  622  --------------------------------------------------------------------------  621
                                                                                      
Sbjct 3402  TTTCTTGTTTTTTTTTTGAGATGGAGTCTTGCTCTGTCGCCCAGGTTGGAGTGCAGTGGCACGATCTCAGCTCA  3475

Query  622  --------------------------------------------------------------------------  621
                                                                                      
Sbjct 3476  CTGCAACCTCCTCCTCCCAGGTTCAAGCAATTCTCCTGCCTCAGTCTCCCAAGTAGCTGACACTACAGTTGTGT  3549

Query  622  --------------------------------------------------------------------------  621
                                                                                      
Sbjct 3550  GCCACCACACCTGGGTAATTTTTTGTGTTTTTAGTAGAGACTGGGTTTCACCGTGTTAGCCAGAATGGTCTCTA  3623

Query  622  --------------------------------------------------------------------------  621
                                                                                      
Sbjct 3624  TCTTCTGACTTTATGATCCACCCGACTCCACCTCCCAAAGTGCTGAGATTACAGGAGTGAGCCACTGTGCCTGG  3697

Query  622  --------------------------------------------------------------------------  621
                                                                                      
Sbjct 3698  CCTGTTTTTTGTTTCTTTAACAAAAAGTTATAGAGACTTCTATGAGTATTGTACCGAATCTAAATCACAATTGA  3771

Query  622  --------------------------------------------------------------------------  621
                                                                                      
Sbjct 3772  GTATATAATCATTGAGCGATATTCATTTTTCCAATCAGTATGGGATTTATATCTATTTATACATGTTTTTAATC  3845

Query  622  --------------------------------------------------------------------------  621
                                                                                      
Sbjct 3846  ATTTTGATCAATGTTTATAGATTTCAAGGTACAAACCTCACTTTTTATGTTTATTCCTAAATATTTCTTACTTT  3919

Query  622  --------------------------------------------------------------------------  621
                                                                                      
Sbjct 3920  AAGTTCTTTAGCAAATGGAATTGGTTTTTAATTTTCTTTTAAAATTATTTATTGTTAATGTATGGAAATTCAAC  3993

Query  622  --------------------------------------------------------------------------  621
                                                                                      
Sbjct 3994  TAATTTTTGGTGCTGTTATTCTATTCTGCAAATAAACTGAATGTGTTTGTTAGTTCCAGTTGCATTTTGGCTGA  4067

Query  622  --------------------------------------------------------------------------  621
                                                                                      
Sbjct 4068  CTCTTTGTGATTTTCTTTACAGAAGGTCATGTCATCTACAAACAAATAAAATTTGACTTCTTTCTTTCTGATTT  4141

Query  622  --------------------------------------------------------------------------  621
                                                                                      
Sbjct 4142  GGATGAGTTTGATTTCTTTTGCTATTTCATTGTTCTGGCTAGGACAGCCAGTATTGATTGAATAGAAGGGGTGA  4215

Query  622  --------------------------------------------------------------------------  621
                                                                                      
Sbjct 4216  GAGCATTCTTGCATCATGTGAGATCCTACAGGAAAAGCATTCCGTTTTCCCTGATTGGTTATTTCTGCTGTGGT  4289

Query  622  --------------------------------------------------------------------------  621
                                                                                      
Sbjct 4290  CATTTCATGGATGGTCTTTGTATTGCTGAGGTAAATTTTCTTCTGTATCTATTTTGTGTGGGATTTCTATGATG  4363

Query  622  --------------------------------------------------------------------------  621
                                                                                      
Sbjct 4364  ACTTGATGTTGACTTTTGTGAAATGCTTTTTCTCCATGTATTGAGATGATGTGGTTTTCATCTTTCATTGTGTT  4437

Query  622  --------------------------------------------------------------------------  621
                                                                                      
Sbjct 4438  CAAGTGGTATATCACATTGATTTGCTTGACTATGTTGAACCATCCTTGCATCCCAGAAATAAGTGGCACTTGCA  4511

Query  622  --------------------------------------------------------------------------  621
                                                                                      
Sbjct 4512  TATCTACAATCCTTTTAATATCCTCTTGAATACAGTTCGCTAGTACAAGGGGTCTTCAAGAAGTTCATGAAAAA  4585

Query  622  --------------------------------------------------------------------------  621
                                                                                      
Sbjct 4586  AATACATATTATGTGAAAATTGCACATGATGTCACATTTTCTGCACCAAAATAAACTGGCACAAATCTGTTATA  4659

Query  622  -  621
             
Sbjct 4660  A  4660

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