Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_10684
- Subject:
- NR_134515.1
- Aligned Length:
- 1822
- Identities:
- 625
- Gaps:
- 1182
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AGAACTCGGTCTCCACGGCACTGCTGGCCGGACGAGGGATGTTATTTTGGGCAGTGCATCTGGACTTGGTTCAA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GTGGCACCAGCCAAACCCCTGCCTTACTGACCTCTCCCCTGGAGGAGCAGGAGCAGCGCTCGAGGCCGCCCTGG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GAGAGCTGAGAGGCAGGCTCTGGACTGGGGACACAGGGATAGCTGAGCCCCAGCTGGGGGTGGAAGCTGAGCCA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GGGACAGTCACGGAGGAACAAGATCAAGATGCGCTGTAACTGAGAAGCCCCCAAGGCGGAGGCTGAGAATCAGA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GACATTTCAGCAGACATCTACAAATCTGAAAGACAAAACATGGTTCAAGCATCCGGGCACAGGCGGTCCACCCG 370
Query 1 ----------ATGGTTCT---------------------------AAATA------AAAAATATGG-----GAG 26
|||| ||| ||||| |..||.|||| |||
Sbjct 371 TGGCTCCAAAATGG-TCTCCTGGTCCGTGATAGCAAAGATCCAGGAAATACTGCAGAGGAAGATGGTGCGAGAG 443
Query 27 CTACCTTGG-------------------TGTCA------------------ACTTGGGTTTTGGCTTCGGAG-- 61
.| |.||| ||||| ||| |||||.||.|| ||||
Sbjct 444 TT--CCTGGCCGAGTTCATGAGCACATATGTCATGATGAGAGAAGGTGATGACT--GGTTTGGGGTT-GGAGAA 512
Query 62 ----TCACCA----TGGGAGTGCACGTGGCAGGCCGCAT--------CTCT----------------------- 96
.|| || ||.|||.|| .||||.||.|.|.|| ||||
Sbjct 513 GAAAGCA-CATGTTTGAGAGGGC-TGTGGAAGACAGAATCAGGGAGACTCTGCCAGCAGAAGATGTGGGCAAAG 584
Query 97 ---------------------------------------------GGAGCCCACATGAACGCAGCTGTGACCTT 125
|||||||||||||||||||||||||||||
Sbjct 585 CGCCGATGAGCTGTTCTGGAGCACGGGGCCCAGCACAGGGTGAGAGGAGCCCACATGAACGCAGCTGTGACCTT 658
Query 126 TGCTAACTGTGCGCTGGGCCGCGTGCCCTGGAGGAAGTTTCCGGTCTATGTGCTGGGGCAGTTCCTGGGCTCCT 199
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 659 TGCTAACTGTGCGCTGGGCCGCGTGCCCTGGAGGAAGTTTCCGGTCTATGTGCTGGGGCAGTTCCTGGGCTCCT 732
Query 200 TCCTGGCGGCTGCCACCATCTACAGTCTCTTCTACACGGCCATTCTCCACTTTTCGGGTGGACAGCTGATGGTG 273
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 733 TCCTGGCGGCTGCCACCATCTACAGTCTCTTCTACACGGCCATTCTCCACTTTTCGGGTGGACAGCTGATGGTG 806
Query 274 ACCGGTCCCGTCGCTACAGCTGGCATTTTTGCCACCTACCTTCCTGATCACATGACATTGTGGCGGGGCTTCCT 347
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 807 ACCGGTCCCGTCGCTACAGCTGGCATTTTTGCCACCTACCTTCCTGATCACATGACATTGTGGCGGGGCTTCCT 880
Query 348 GAATGAGGCGTGGCTGACCGGGATGCTCCAGCTGTGTCTCTTCGCCATCACGGACCAGGAGAACAACCCAGCAC 421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 881 GAATGAGGCGTGGCTGACCGGGATGCTCCAGCTGTGTCTCTTCGCCATCACGGACCAGGAGAACAACCCAGCAC 954
Query 422 TGCCAGGAACAGAGGCGCTGGTGATAGGCATCCTCGTGGTCATCATCGGGGTGTCCCTTGGCATGAACACAGGA 495
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 955 TGCCAGGAACAGAGGCGCTGGTGATAGGCATCCTCGTGGTCATCATCGGGGTGTCCCTTGGCATGAACACAGGA 1028
Query 496 TATGCCATCAACCCGTCCCGGGACCTGCCCCCCCGCATCTTCACCTTCATTGCTGGTTGGGGCAAACAGGTCTT 569
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1029 TATGCCATCAACCCGTCCCGGGACCTGCCCCCCCGCATCTTCACCTTCATTGCTGGTTGGGGCAAACAGGTCTT 1102
Query 570 C------------------------------------------------------------------------- 570
|
Sbjct 1103 CAGGTACTGCCCCTGCCCAGGCCCATTCCTTTGAGTTTTTCTGTGGGTCCCCTGTGTGTTGAGGGGTGGGGGGT 1176
Query 571 -------------------------------------------------------------------------- 570
Sbjct 1177 GATGTGAGGGGCAGCACAGGAGGGTCCTGCTGAGCCCCCAGGTAGCCTGGGGAGCAGGAGTGAGTCCCAACATT 1250
Query 571 -------------------------------------------------------------------------- 570
Sbjct 1251 TCCCCAGGCCAGTACAGATACAGATCCTGCACCTGCACTGAGTGTCAACGCTGTCCCTGAATTGGGCTGAGGCT 1324
Query 571 -------------------------------------------------------------------------- 570
Sbjct 1325 GACCAGGGCCCTGGGTTGGGGGTGTTTCCTGGGGTAGCCTGGGGATGACTCCTCTGCTCAACCTGTCTTGGCCC 1398
Query 571 -------------------------------------------------------------------------- 570
Sbjct 1399 GAGGTGGATGAGGGTGCTGTCCTGGGCATCAGCCCCCTCAGCAGGCCTCTGCCTCTTGCCTGCAGCAATGGGGA 1472
Query 571 ------------------------------------------------AGGTGGCATCATCTACCTGGTCTTCA 596
||||||||||||||||||||||||||
Sbjct 1473 GAACTGGTGGTGGGTGCCAGTGGTGGCACCACTTCTGGGTGCCTATCTAGGTGGCATCATCTACCTGGTCTTCA 1546
Query 597 TTGGCTCCACCATCCCACGGGAGCCCCTGAAATTGGAGGATTCTGTGGCGTA---------------------- 648
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1547 TTGGCTCCACCATCCCACGGGAGCCCCTGAAATTGGAGGATTCTGTGGCGTATGAAGACCACGGGATAACCGTA 1620
Query 649 -------------------------------------------------------------------------- 648
Sbjct 1621 TTGCCCAAGATGGGATCTCATGAACCCACGATCTCTCCCCTCACCCCCGTCTCTGTGAGCCCTGCCAACAGATC 1694
Query 649 -------------------------------------------------------------------------- 648
Sbjct 1695 TTCAGTCCACCCTGCCCCACCCTTACATGAATCCATGGCCCTAGAGCACTTCTAAGCAGAGATTATTTGTGATC 1768
Query 649 ---------------------------------------------- 648
Sbjct 1769 CCATCCATTCCCCAATAAAGCAAGGCTTGTCCGACAAAAAAAAAAA 1814
