Nucleotide Global Alignment

Description

Query:
ccsbBroad304_10792
Subject:
NR_027058.1
Aligned Length:
2188
Identities:
217
Gaps:
1944

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  AAGTTGCTGACGGAGCTACTTCCGCCCAGGGGAGTGGGAAGTAAGTGGAGACACGTGCTTTGGCCTGTTGGAGG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  GGAAACCCGCTCTCGCCTCCTGGTGGTCGCCGACTCGCAGTCCGCAGGATGACTCAGGGCAGCCCTGACCACAG  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  TTCCGCCGCCATCGGCCCTAGCCTGCGGAATTGGGCTCGCCCCGGGACGATAACAGAGCTCTGCCGGGGGCTGG  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  AGGCACTGACCGGGTGACCAGAGACCCAGAGACCAGACCCCCTCCACGGCGCCCGGGATTTCGGGGACGGCTTC  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  TCCCATCGCAAGTTTCAACAGAAAATGAGAAATATCCCCCGACGATTGGCTGAAAACATGCAGCAACCACTATT  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  TTCTTCCTGCCCCTCGTTGATGAGAGCATTCGAAGTGACCTCAGCAGGGCATCCAGGTCAGTTTCTGGAAGACT  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  TGTGTGTGTGATGAATGAATATCTGGTTTTGTCTCTGCTGGGCCTGTGTGCCTGGAAAGGAATTGTTTTGGCCT  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  AGGATCATCCAGGTTTGTTTGGTTTAGTTCTTGACCACATATTTTTTGAATGGTGACTGCTTAAGACCCTGTTG  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  TGTATGGCTATAAATAGATACACGCCAAGGTGACCACATACTCTGTGGTTCCTGTGCCCGCCGGCCATGTGTCT  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  GAGTGTGTAGCCTCTCATCATCTAAAGGAACTTTGGCTGCAGAGGGGAGGCCTGGTCCCATGGGAAGTTTTGGG  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  AGCGCAGCAGCAGGTGGGTTCAAACGACCCAGCAAGTGCCTCCTTAGCACTTAGAGGCGGAGGCCACCACGTTG  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  TCCACGTGGGGTTTCTGATCCCAGCTCCCCACCAGCCTGCTGGACCTCGGGCAGGTCCCTCCCTGTTTGTACCT  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  CCATTACTTCTTCAGTAAGATGGGGACACTGAAGATGACCATGCCTCCCACCAGATTGGTGCTTTTTTTGTTTT  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  AATAAGGGACAGAGTCTCACTATGTTGCCTATAGGCTGGTCTCAAGCTCTTGGCCTCAGTTTTCCTGCCTCAGC  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  CTTCAAATATGCTGGGGTGACAGGCATGAGCCACTGCACTGGCCCAGATTGGTACATTTGAGGGTTAAATGAGC  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  AAATCCTATAAAGCACTCAGGAGAGGGCTGTGGGGTTTGGGCTGGGGCCTGGGAGCACTTTAGACGTGGTAGCT  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  ATGTTGTTGTCACCTTTCTCCTCTTTCAAAGCATTTTTTGTTTGTTTGTTTTTGTTTTTGAGACAGAGTTTCGC  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  TCTTGTGGCCCAGGCTGGAGTGCGGTGGTGTGACCTCGGCTCACTGCATCCTCCGCCTCCCGGGTTCAAGTGAT  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  GGGATTACAGGTGCCTGCCACAACGCCCAGCTAATTGTTTGTATTTTTAGTAGAGACGAGGTTTCACCATGTTG  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  GCCAGGCTGGTCTCGAACTCCTGACCTCAGGTGATCCACCTGCCTTGGCCTCCCAAAGTGCTGGGATTACAGGT  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  ATGAGCTACCGCGCCCGGCACAAAGCATTTTCAGCTGTGAAATTCCCTGGGGTGCTGCAGTAGAGGAAGGTTTG  1554

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1555  GGGTCTTGACGGGTGCTATTTGCCACGGAAAGATGCCTTCCTGCTCCCAGGGCAGGAGAGCCGAGGTAAGACTT  1628

Query    1  ------------------------------------------ATGGAGTCTCGCTCTGTTGCCCAGGCTGGAGT  32
                                                      ||||||||||.||||||.| ||||||||||||
Sbjct 1629  ACTGTAGGCTGTCGTTTTTTTTGTTTGTTTTTTGTCTTTGCGATGGAGTCTCACTCTGTCG-CCAGGCTGGAGT  1701

Query   33  GCAGTGGCCTGATCTCGGCTCACTGC--AACCTCTGCCTCCCAGGTTCAAGCGATTCTTCTGCCTCAGCCTCCA  104
            ||||||||.||||||.||||||||||  ||||||..||||||||||||||||||||||.||||||||||||||.
Sbjct 1702  GCAGTGGCATGATCTTGGCTCACTGCAGAACCTCCACCTCCCAGGTTCAAGCGATTCTCCTGCCTCAGCCTCCC  1775

Query  105  GAGTAGCTGGGACTATAG--ACATGCACCACCACGCCCGGCTAATTTTGTATTTTTGGTCGAGACGGGGTTTTG  176
            .||||.||||||.||.||  |||||  ||.||||..||.|||||||||.|||||||.||.|||||.||||||  
Sbjct 1776  AAGTAACTGGGATTACAGGCACATG--CCCCCACAACCAGCTAATTTTTTATTTTTAGTAGAGACAGGGTTT--  1845

Query  177  C-CATGTTAGTCAGGCTGGTCTTGAACTCCTGACCTCAAGTGATCC-ACCACCTCGGCCTCCCAAAGTGTTGAG  248
            | ||||||.|.|||||||||||||||||||||||||||.||||||| .||.||||||||||||||||||.||.|
Sbjct 1846  CACATGTTGGCCAGGCTGGTCTTGAACTCCTGACCTCAGGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGG  1919

Query  249  A-------------------------------------------------------------------------  249
            |                                                                         
Sbjct 1920  ATTACAGACATGAGCCACTGCGCCCAGCCAGGCTGTTGTTTTTTTACCTCCTTGTTTGCACAATTTGGGCCACT  1993

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 1994  CACAAGAGTGTATACCCTGTGATAAACAGTTACCTACATTCTCCTCTGCATGCTTGTCTTTAGAGGAAGGAAAT  2067

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2068  GTATTAATTGCCCAAAGTAATATATTGTGTTAAGATGTGATATATACTGGGGAAAAAAAAAGTGTATATTGACA  2141

Query  250  ------------------------------------------  249
                                                      
Sbjct 2142  TTTCTGGAATAAACCACTTTGATTCCCAAAAAAAAAAAAAAA  2183

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