Nucleotide Global Alignment

Description

Query:
ccsbBroad304_10792
Subject:
NR_027334.2
Aligned Length:
2625
Identities:
216
Gaps:
2381

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATCTTAAGTTGTATATATGTGCAGAGCGCGGCGCGGGTGGTCACCTCCGCTGCTGCCGCCACCCGCCCGGCCTG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  CCTTTGACCCTATGGGTCACAGACAAGGCAGGGTGATCGCGGCAAGACCCTGAGTGAGACTAGATGCGTTACCC  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  AGAGGGTGCGAGGTCGAGTACCTTCCCTGTCCCATCGCAAACCCAAAGATCCCCGTTCCTGGAGATTCTGATTG  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  AGGTCCCAGCCCTACCTGTCCTGATGCCTGACCAGCAGGATGCAAGCCCAGGAGGCCATCCAGGATACCAGGAC  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  TGGGAGAGAATGCCCAGTGGTGATTCCTGCATAGTCCTAGGAGGTGTCTTGGGCCCAGGCTCTGGAGTTGGAGG  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  CTCAGTTTCAGGGATGGGATCTTACTATGTTGCCTAGGCTGTTCTTGAACTCCTGGGCTCAAGCAGATGATCCT  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  CTTACCTTGACCTCCCGAAGTGCTGGGACTTACAGCTGCGGCTTTAGGAAGGAATCTGCGTTTATGAAGGGGAT  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  GGCACCGCAGAATCATTCCCCCGTGGGTGGCATCGATTTCGAGGGCCGCCTCATCCTGGGGGCCAAGCCTCCAC  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  TCTTCAAGGTGCCAAGTCAACCTGAAACCCTGGGAGAGACTTGGGTCATAGCCAAGATGGCAGGTACCTACGGA  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  GGGTCCCGAAATACACTTCCCAGAAGTCCAGGCGGCAACTTCCGCTCCAGGGTGCCAAGCCCTGGGCGCTCCCG  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  CAAGGACTGCCCGGATTCGTTCCCCGCGCTTCCGGTCTCACTGGGGAGCCGGAATCCCCGAGTCTGCAGCCACC  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  GCCCCCGTCCACACGATAGCCCTCCCGGTTAAGAGGACCCCGCCCTCACCTCTGCGCTCAGCGGGCCGCTCCGC  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  GCTCCTGAGCACGCGCAGTCTTCGACTTCCCCCTCCCGCTGGACTACGTCTCCCAGGATGCTCCGCGCACCAGC  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  TCGAGCGCCTCCTTGCCCTTCCCCCACCCTCGTCCCCGTTTCTACACCCTCTCCTCCCTTCCCCTAGCGGTGGT  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  CGCAATGATCAGGTCATACTCCTGGCCGCTTCTTCCCATGCTCCCCGCCTCGAATCCGTGCGTCGGCATGCGCA  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  AGCCTCTCAGGTACAACAGACGGCAGCACCGCCTACCAGATCGCGCATGCCCCCCACCACGTTTTCCTCACTTC  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  TCTACGGGCCTTCCTGAGATTAGCAGGATCCTGCACCAATCACGGCCGTCATTAGAACTCCGTCGGTGCCCCAC  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  CGCGTCTCCATGGCAACTCCCTACAGGAAGGGGCCTCTGCTACTTCCTAGACCGCAAAATGGAGAAAGGCTTGG  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  CCCGATGCTTTCCGGCAGATGTAGTCAGCAGGCCCTTCGTGTGTACGTGCGCGCGCGGCGCGATGACGTTCCTC  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  TGTGATCATGGGCGAGGGGCGGGCCCTGAACGTCTCCATGGTAACCTGGGGACACGACTCGACATCGCCTGGGT  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  AACCCGGAGACGCGGCGGGCGTTGAAAATGCAATGGGGCATGTGGGATGAAGAGGTGGGGAAGGGTACTGGGGC  1554

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1555  AGAGAGATGCCGATCGATAGAAACAGCGAGGAGAGACGGAGAGAGACCAGAGACTCAAGGGCAAAGAGAGACGA  1628

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1629  AGGACCGGCGGGAGGAAGAGAGAGAGAGACAGAGAGACAGACTCACAGACTGGGAGGACCGGAGACTCGACGCG  1702

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1703  AGGAGAGACAGTGAAAATAAGTGAACAAACATAGAGACACGGGTCCAAGTTATAAGAGGGCTGAGTGGATCAGA  1776

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1777  GGGTCAGGGCCGGGCAAACAGGTGTCAGAACAGTTAGCAAGAGAGAGGCAGATCAGAAAGGGATGCAGATGAAA  1850

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1851  GAGACACAAAGAAGGAAACGCAGAATGGGTTCACAGAGACAAGAAATGCAGATATCCAGACTCAAGAGGTAGAC  1924

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1925  AAGAAGGGAGAGGGACAGAAACAAGAAGGGAGAAAAGGGACAGAAATTAGAGATACAGTAAGATGGATTGACAG  1998

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1999  TTTTCGAAGACCTAGAGAAAGATGACAGCACGAAGAGAGACAGGGAGAATCCGAGGTAAAACTGTTAGGAAAAC  2072

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2073  TTAGGAGTCCAGATGCTGTCCAGTTATATGCTACCCTGTACAGGTTGATAGGTTGCAAATGCTTTCTGTCCAGT  2146

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2147  GTATCGCTTTGTAGCTCACTAAGCAGTTTTGTATCCAACTTTGTGCTTTTATTTCAGTGTTTTTCTTTTTCTTT  2220

Query    1  --------------------------ATGGAGTCTCGCTCTGTTGCCCAGGCTGGAGTGCAGTGGCCTGATCTC  48
                                      |.|||||||||  |||||| ||||.|||||||||||||||..||||||
Sbjct 2221  CTTTCTTTTTTTTTTTTTTTTTTTTGACGGAGTCTCG--CTGTTG-CCAGACTGGAGTGCAGTGGCACGATCTC  2291

Query   49  GGCTCACTGCAACCTCTGCCTCCCAGGTTCAAGCGATTCTTCTGCCTCAGCCTCCAGAGTAGCTGGGACTATAG  122
            ||||||||||||||||.|.|||||||||||||||||||||.||||||||||||||.||||||||||||||..||
Sbjct 2292  GGCTCACTGCAACCTCCGTCTCCCAGGTTCAAGCGATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTGCAG  2365

Query  123  ACATGCACCACCACGCCCGGCT-AATTTTGTATTTTTGGTCGAGACGGGGTTTTGCCATGTTAGTCAGGCTGGT  195
            .| |||.|||||||.||||||| |.||||||||||||.||.||||.||||||||.|||||||.|.|||.|||||
Sbjct 2366  GC-TGCTCCACCACACCCGGCTGATTTTTGTATTTTTAGTAGAGATGGGGTTTTACCATGTTGGCCAGACTGGT  2438

Query  196  CTTGAACTCCTGACCTCAAGTGATCC-ACCACCTCGGCCTCCCAAAGTGTTGAGA-------------------  249
            |||||.||||.||||||..||||||| .||||||||||||||||||.||.|| ||                   
Sbjct 2439  CTTGACCTCCAGACCTCTGGTGATCCGCCCACCTCGGCCTCCCAAATTGCTG-GAATTACAGGTGTGAGCCACC  2511

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2512  GCGGCCGGCCAGTGTTTATTCTTCCTTTCCTGTCTTCCTAGAATCATCTTGCTGCTTCCCTCAGTACGGTAAAT  2585

Query  250  -----------------------------------  249
                                               
Sbjct 2586  AAATCTTTTGACACATGCTCAAAAAAAAAAAAAAA  2620

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