Nucleotide Global Alignment

Description

Query:
ccsbBroad304_10792
Subject:
NR_037158.1
Aligned Length:
2638
Identities:
214
Gaps:
2395

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATCACTTCTGCTCACAACTGCCCAGTCCCAGCCAGTCACATGGCCCCATCTGGCTACAGAGGGTCAGGATGTAC  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  AATCCTGCCATGTGCCCAGCATATGGTGAACAGCATAATGACTTCCATACTCATGTATCTAAACGGTCCAGGAG  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  AAACGTGGTTTCAGGCATGGCTGGATCCGGGATCTCAAGAGCTATTACCATCTCTCAGCTCTGCTTTCTTGTGT  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  GTTTCTTGCTGCCCCTCCCAGTACCCTCCTTACAGCTTAGTAATCCCAGCAGAAAGAGAGCATGGACCAGCTAG  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  GGTACGTTCCAGCAGAGCAAGGTGAAAAAGAGCTGAAAGTGGCATCAGAAGCCCAGAGTTCTGGTTCCAGCTCC  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  GACCACTCATTCAGTGTGTGACCTCAGGCAGGTCACCAGCCTGAGCTGTGCCTTCATTTCATCTGTCAGACGGA  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  TGACTCTGCCCCTCAGAGCTTGCAGACGGCAAGGTGATAAGGAACAATATGGACTTCTTGCAGCTCCTGGAGGC  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  AGACGCTGGAGGGCTGGGCTCCGCCTCAGTCACAGGCAATGCCCTGATCCCACAAAGCCCCGGAGATGCTGTGG  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  ACCAACTTGCAACACAAGACCCTAGGAGGGAGGACGGCTGTTGTCATCTGTTGACCACAAACACGTTTACTGTG  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  CACACTTGTGCACATGGGTGAGCTCCGTGAGTCCAGACATGCACAGGGCAGGTGAATGCATGGAGTACCATGGG  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  CATTATCCCAGGCCCACAGGCACGTGCAATCACACACACACGTGGACATGCCACTGCGCACCTAAGACACACAC  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  ACACACACACATGCATATGCACACACACACATATGCACACACACACACAGACACTGTAAACATCAGGCTCAAAG  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  GCCCATCCAGGAGACCAAAGGCTGCAGGTGTCTTCACATCACAGCCCAGGTGACCTTGTCTCTGGCTCAGGGCC  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  CAGTGGCCTGGCCAGCTCTGGACATCCAGTCAGCCTCATTAGCTGGCCTGGGGTCCAGGGCTCGAAAGTGGCGG  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  AGGAATGACCACCCACTGGCGGAGGTAGCTCCGGGGGGGTCCTTCGTCCCCGGGGCTGGTGAAGTCACACTCCA  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  CAGGGCTGCTGCAGTCAGAGCCCACAAAGCCACTGTCAAACGTGTCCATATCCAGGCCGGCCAGGGGTGAGCCC  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  GCCTCACTCTCTGAGACCCCTCCAGGTGACCGGCCACCCCAGGGCAGTCCCCCAGCCCAGTCCTCCCCATCTGC  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  AAGGGGTGGCTTTAGTCTGTCCAGGAGGCTTCCCAGGGGCCCTCCTAGCCCAGGGCTGCCAGCTGAGACACAGC  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  CACAGGACAGGACTGTGGTCCCTGCATCCAAGAGTGGGTCCTCTAGGCCTGGGCTGGGCTCCAGGCCAGCATCC  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  AGGTCCAGGGCTGGGTAGCCGTCATCCTCACAGCTGCAGGGCCAGGTGCATGGCCCCTCTGCATCTAGCACAGT  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  CACTGTGTCAATGGACACCAGGCCGTATGGCCGATCCCTCTCCTCACTGTAAGCTGAGCCCCCCGAGTTCTGGG  1554

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1555  CTGTCGGCCAGAAGCTGGGCTTGGGCACACCGTCAGACTCCACCAGCTCTGCTGGTTCTTGTAGCTCCGTGAGC  1628

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1629  TGCAGCCTCTTGGCCGGGCTCCGTGGTGGGTGGCAGCTGTACACCTCCAGGGTGGAGGGCACCTCTGGGCTCCA  1702

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1703  GGGTCCCAGCTCCAGGCTGGAGCCAGTGAAGGGTGCACCCACCCATTTCTGTGAGAGAGAAAAAGAGAGAGTCA  1776

Query    1  --------------------------------------------------------ATGGAGTCTCGCTCTGTT  18
                                                                    |...|||||.||||||.|
Sbjct 1777  TAGCACAGGATGAGGGTAAGGTGAGGGTTTATTTTTCTTTTACTTTTATTCTTTTGAGACAGTCTGGCTCTGCT  1850

Query   19  GCCCAGGCTGGAGTGCAGTGGCCTG--ATCTCGGCTCACTGCAACCTCTGCCTCCCAGGTTCAAGCGATTCTTC  90
            ||||||||||||.||||||||  ||  |||||||.||||||||||||||||||||||||.|||||.||||||.|
Sbjct 1851  GCCCAGGCTGGAATGCAGTGG--TGCCATCTCGGTTCACTGCAACCTCTGCCTCCCAGGATCAAGTGATTCTCC  1922

Query   91  TGCCTCAGCCTCCAGAGTAGCTGGGACTATAGACATGCAC----CACCACGCCCGGCTAA-TTTTGTATTTTTG  159
            |||||||||||||..|||||||||||||    |||.||.|    ||||||.||||||||| ||||||||||||.
Sbjct 1923  TGCCTCAGCCTCCCAAGTAGCTGGGACT----ACAGGCGCCTGTCACCACACCCGGCTAATTTTTGTATTTTTA  1992

Query  160  GTCGAGACGGGGTTTTGCCATGTTAGTCAGGCTGGTCTTGAACTCCTGACCTCAAGTGATCCA-CCACCTCGGC  232
            ||.||||||.|||||..|||||||.|.|||.|||.|||||||||||||||.|||.|||||||| ||.||||.||
Sbjct 1993  GTAGAGACGTGGTTTCACCATGTTGGCCAGACTGATCTTGAACTCCTGACGTCAGGTGATCCACCCGCCTCAGC  2066

Query  233  CTCCCAAAGTGTTGAGA---------------------------------------------------------  249
            ||||||||||||||.||                                                         
Sbjct 2067  CTCCCAAAGTGTTGGGATTACAGGCGTGAGTCACTGTGCCCAGCCAAGGTGAGGGTTTAAACAGACAGAAAGAC  2140

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2141  AGACACAGACACAGAGACAAGACAAAGAGACATCAAGAGAGACAGACAGAGACATGAAGATAGACAAAGACACC  2214

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2215  GAGAGACAGAGAGAGAGAGAGGAATCAGGACCACAATGTGCTCCCACCCTAGTGGATCCCCCTCCTACTCTGGG  2288

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2289  CCTCAGTTTCCCTACTTGTAGAAGGGAGTTGCTACCCTTAGTAGTGTGACCAGTCAGACAACTGGTGGCCCCAT  2362

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2363  AGTCCAGGCAGGGACCAAGATTCCTGAGTCAAGGAGACATGGGGGCAGGAGGGCCTGAGGTCTGAGGTACCCCT  2436

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2437  GAGCCATCTCCTGCTTTCCCGCCTCCTTGATGCTTCTTGAAACCTAGCACTCTCCTGGTTTATGTGTCCCCACC  2510

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2511  AGACAGACACTTGGCCCCCGGACATAAGTCTTGTCTCTTCTGTCCATGGCTGTAGCCCCAGTGCCTAGCACAAA  2584

Query  250  ------------------------------------------------  249
                                                            
Sbjct 2585  GTAGGTGCTCAATAAATGTTTATTAACGAAAAAAAAAAAAAAAAAAAA  2632

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