Nucleotide Global Alignment

Description

Query:
ccsbBroad304_10792
Subject:
NR_108099.1
Aligned Length:
2743
Identities:
217
Gaps:
2496

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  GCGCTGGCCCTCTCTCCTGGGACACGCACCGCCTCCAATCCTGGTTTATGCTGGGATTGTAGTCAGGCAGCCCT  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  GTGAGCAATTTTTCAGATTAACTCTTAAGTACTCCACGGCTACATGCTCCTGAAGCTGTTATAGGCCCAGCCTC  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  AGATCTGTGCAGGGCGGATGCACAAGAGCAGAATCTCCGTGGACATCTTTCTGGAGCATCAATTTTACTGCAAG  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  ATTTTGAAGAAACACATTTAATTGATTTTCAAGGTGAGAAATTAAACCTCGAAAACTAGACTGGAAAGTCATCT  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  ACGCCTGAACTATCAGACTTTCTTCAGAAGAAAACTCTAAGGAGAACATATTTTCCATTATTATAAATATTACA  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  AATGAGAAATCATAGCAAGTTACCTGAAAATGCTGCCCTGGCAGTTTCCTAAATCACAACATGTCCTGGGTATG  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  GTTTTAGGTGTATTTTCTTTTTGGGGTGTGTTCACCTTTTGGATATAAAAATTGGGGTTTTTGACCACATCTTG  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  TAAGTTTTCTGCTATTAGTAGTTTCTTTACTTTTGTACCATATTTAATTTTTCTGTGTCTTCCTCTTCTTCTCA  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  GACTCAGTCACTCCACAAGTCTCTAAAGGCTCTGTTCATTTTCTTCAAACATGTTTCATGTTGGATGATTTCTA  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  TTGCTGTCTTCTGTTTCTACTCTGTGGATAAGCTCAAGGGTGTGTGTGCGTGTGTGTGTGTGCGTGTTTTCCAT  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  TTCATTATTTTTCTATTTGGTTCTTCTTATAATTTTCATTTCTCTGCTGAGGTTCCACATCAGTTAATTCATTA  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  TGAGAATATTTTCCTTTACTCTCATGAACATACTCATAAGAGCTGATTTTAAATCCTTGTCTGCTGATCTGATT  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  ACATCATGTTGCTTTTTATCTTGTGTATACATTACATTTTCATCTTTCTTCACACATTTCATGAATTTTAATGT  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  GTTCTATGAGTTTCTGGTGGTTATAGAGACTCTAAATTCTGCTGTATTCTTTTGAAGAGCATTGTTATTATTTG  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  AAGAAGGGGTTAATTTGGCTGGATTCAAACTGCAATACCTGTCTCTCCTGCAGTGGGCACAGCTGAAATCCTCA  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  TTCAGTTCTTATGCACATATATGTATTTTATATAGATGTGTGATTCTATGTAACTGTATATACTATGCAGATTT  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  TGTCACAGTTACATGTGAGAGTGTTAGTTCAACAATACTCCAGTACTACTGGAAGCCAGAACCTTAGTTTTGTT  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  TGCTTACTGGATTTTATATAAATGAAATAATATAGTATGGATACTTTTACACCTACTTTCTTTTACATGTCATT  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  ATGTTTGTGATATTCATCTTTGCTGTTGCAGATTGCTATAATTTGTACACTTTAAAAAGCATTGTTTACACTGT  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  GGTAAAATATACATAAAATTAACCACTTTAACCATTTTTAAGTGTGAAGTGTGCAGGAATTAAATACATTCACA  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  TTGTTTTGCAACCACCATCCCCATCTATAGGGAACATTTTTTATCTTGCAAAACTGAGTCTCTGTGCTGATTAA  1554

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1555  GCAACAGCTCCCAGTTACCCTCCCTCTAGCCCATAGGAACCACTCTTCTACTTTGTGTTTCTATGAATTTAATT  1628

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1629  ACCCTAAATACCTCACGTGAGTGGAATCATACAGTGTTTGTCATTTTGTGACTGGTTTATTGTACTTAGCACAA  1702

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1703  TGTCCTTAAGGTTTATCTATGTTGTAGCATGTATCAGAATTTTCTTACTTTTGCTAAGTGAATAATATTCCACT  1776

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1777  GCATGTAAAAACACATTTTGTTTACCTACGTATTTATTGATGTTGATGATTCAAGGAAAGCTTTGATTGTTTCA  1850

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1851  CCTTTTAGCTATTGTGAATAATGCTGCTAGGAACCTAGGTGTATGTATATCTCTTTGTGTGCCTGCTTTCATAT  1924

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1925  CTTTTTGAGTATATCCCAGAAGCAAGATTGCTGGATTATAAGGTAATTATAAGTGTAATTGTATTTGTTTGTTT  1998

Query    1  ---------------ATGGAGTCTCGCTCTGTTGCCCAGGCTGGAGTGCAGTGGCCTGATCTCGGCTCACTGCA  59
                           |||||||||.||||||||||.||||||||||||||||||..|||||||.||||||||||
Sbjct 1999  GTTTGTTTTTCTGAGATGGAGTCTTGCTCTGTTGCTCAGGCTGGAGTGCAGTGGTGTGATCTCAGCTCACTGCA  2072

Query   60  ACCTCTGCCTCCCAGGTTCAAGCGATTCTTCTGCCTCAGCCTCCAGAGTAGCTGGGACTATAGACATGCACCAC  133
            |||||.||||||...|||||||.|||||||||||||||||||||.||||||||||||.||.||.|.||||||||
Sbjct 2073  ACCTCCGCCTCCTGTGTTCAAGTGATTCTTCTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCGTGCACCAC  2146

Query  134  CACGCCCGGCTAA---TTTTGTATTTTTGGTCGAGACGGGGTTTTGCCATGTTAGTCAGGCTGGTCTTGAACTC  204
            ||.|||.||||||   ||||||||||||..|.||||||||||||..|||||||.|.|||||||||||..|||||
Sbjct 2147  CATGCCTGGCTAATTTTTTTGTATTTTTATTAGAGACGGGGTTTCACCATGTTGGCCAGGCTGGTCTCAAACTC  2220

Query  205  CTGACCTCAAGTGATCCA-CCACCTCGGCCTCCCAAAGTGTTGAGA----------------------------  249
            ||||.|||  |||||||| |||||||||.|||||||||||.||.||                            
Sbjct 2221  CTGAACTC--GTGATCCACCCACCTCGGTCTCCCAAAGTGCTGGGATTACAGATGTAAGCCACTGCGCTTGGTG  2292

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2293  ATTCTCATGGCAGGTGCGACATTGTACTTGCCCACCAATAGCTTACTAGGTTTCTAATCACTCCACATCCTCAT  2366

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2367  CAACACTGTTATTTTCTGTTTTTTGATAGTGGCTATCCTAATGGATGTGAAGAGATAGCTCATTGTAGGCTTGA  2440

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2441  TTTGCATTTTGCTAATAATTAGTTCTCTCGAGTATATTTTCATATGCTTTTTGGCCATTTTACACCATCTTTAA  2514

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2515  GAAATGTCTGTTCAAGTCCTTTGCCCATTTTTGAATGAGGTAGTTTTTTTTTGTTGTTGTTTAGTTATAGCAGT  2588

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2589  TCTTTATATATTCCAGGTATTAATCTCTTATCAGATGTATGATGTGCAAATATTTTCCCATGCTGTGCATTGCT  2662

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2663  TTGCAATATTGTTGATAATATCCTTTAATGTGTAAAAGTTTTATTTTATTTTCATAAAGTCCAATTTGTCTTTA  2736

Query  250  -----  249
                 
Sbjct 2737  TTTTT  2741

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