Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_10792
- Subject:
- NR_110456.2
- Aligned Length:
- 6371
- Identities:
- 216
- Gaps:
- 6129
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 CCGTGCCCCTGCTCGCGCTGCAGCCCGTGGAAGGGTTCCGTCCAGCGTATCCTTCAGATCTTGCTGTAGGCCTC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TGGTGTCTGTGCGCGCGCGGCAGGGGCGGCGGCGGCGACGGCCGGAGGTGTACGGTCAGCGGGTTGCGGAGGAT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CGTGCGGGTCGCAAAGGGAAGCCGAGTGCTCCTGCGGCTCCCAGACTGCAACCAGGTGTAAATCCAAACCGCTT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CCAACTCAAGGCAAGTAACAGCCCACGGTGTTCTGGCAGGAAAACATCAGCTAAGAAAGGAAACTGGGTCCTAT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GGCTTGGACTTTCCAACTCTGACAGACCGGCAGGACAGAAACAACTGGTTCAGGAGCCCTTGCCAGCCTCTAGA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GAAATCCCAGAACACTCAGCCCTGATGACACATTAATACCCTGCACATATTGGAGACTGCTGACCACGCATACT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CACCAAGCCACAGACTTGTCTTCCACAAGCACGTTCTTACCTCAGCCACAAAGTGCCCAAGCCACATGTACTAA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 AGGTTGAAATCAGAGACATGTACAGGGTATTAAACAGATACCAAGGGGAACAGTTAACTTGAATATAGCTTGAA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TAGAAAGTCAAAATCAGCAACAAGTCTACAATCCAGTGCTGATATCAGATACAAGCTTCAAGGACAACTTTCTG 666
Query 1 --------------------------ATGGAGTCTCGCTCTGTTGCCCAGGCTGGAGTGCAGTGGCCTG--ATC 46
|.|.||||||||.|||||||||||||||||||||||||| || |||
Sbjct 667 TGTATGTTTTTTTTTTTTTTTTTGAGACGTAGTCTCGCCCTGTTGCCCAGGCTGGAGTGCAGTGG--TGCAATC 738
Query 47 TCGGCTCACTGCAACCTCTGCCTCCCAGGTTCAAGCGATTCTTCTGCCTCAGCCTCCAGAGTAGCTGGGACTAT 120
|||||||||..||||||||||||||||||||||||.||||||.||||||||||||||..|||||||||||.|||
Sbjct 739 TCGGCTCACCACAACCTCTGCCTCCCAGGTTCAAGTGATTCTCCTGCCTCAGCCTCCCCAGTAGCTGGGATTAT 812
Query 121 AGAC--ATGCACCACCACGCCCGGCTAA-TTTTGTATTTTTGGTCGAGACGGGGTTTTGCCATGTTAGTCAGGC 191
||.| ||| ||||||.|||.|||||| ||||||||||||.||.||||||||||||...||||||.|.|||||
Sbjct 813 AGGCGAATG--CCACCATGCCTGGCTAATTTTTGTATTTTTAGTAGAGACGGGGTTTCAGCATGTTGGCCAGGC 884
Query 192 TGGTCTTGAACTCCTGACCTCAAGTGATCCACCAC--CTCGGCCTCCCAAAGTGTTGAGA-------------- 249
.|||||..|||||||||||| .|||||||||| | |||||||||||||||||.||.||
Sbjct 885 CGGTCTCAAACTCCTGACCT--TGTGATCCACC-CGTCTCGGCCTCCCAAAGTGCTGGGATTATAGGCGTGAGC 955
Query 250 -------------------------------------------------------------------------- 249
Sbjct 956 CACCACTTCTGGCCACAAATTTCTTTTTGAAGGCTTATTCCAGTTTTGTGAGGCTAGCATGAGGTGTATGCATT 1029
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1030 TGCCAGGGGCAAATTTATACTGCTGAATTAACCCATGCAACAAATGCTGCACATCTGCTCGCAGTCCATTTAGA 1103
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1104 GGCATTTGCGGTAGACAATGGAGGGGCCAGACTCATCATACATACCTGATGGCTAACCCACATGCTTGCAGTCC 1177
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1178 ATTTAGAGGCATTTGCAGTGGATGATGGAGGGGCCACATACCTAATTGCTAATCCACATCTGCTGGAAGGTGGA 1251
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1252 CAGTGAGGCCAGGATGGAACCACCAATCCACACCGAGTACTTGTGCTCTGGGGGCATGATGAACTTGATCTTCA 1325
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1326 TGGTGCTGGATGCCAGCGTGGTGATGCCAGGGCACATGGTGGTGCTGCTGGACAGCACTGTGTTGGCGTACAGG 1399
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1400 TCTTTGCGGATGTCCACGTCACACTTCATGATGGAGTTGAAGGTGGTCTTGTGGATGCCGCAGGATTCCATGCC 1473
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1474 CAAGAAGGAAGGCTGGAACAGCACCTGCAGACACCAGAACCACTTGTTGCCGATGGTGATGACCTGACCTGGCC 1547
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1548 ATCAGGCAGCTCATAGCTCTTCTCCAGGGAGGAGGAGGATGTGGCAGTGGCCATCTCCTGCTCGAAGTCCAGGG 1621
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1622 CGATGTAGCACACCTTCTCGTTGATGTCGCGCACAATCTCCTGCTTGGCCGTGATGGTGAAGCTTGGTGAGGAT 1695
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1696 CTTCATGAGGTAGTTGGTCAGGTCCTGGCCAGCCAGGTCCAGACGCAGGATGGCGTGGTGGGAGGGCATGGCCC 1769
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1770 TCGTAGATGGGTACCATGTAGGTGGCCCTGTCTCCAGAGTCCATGACAGTGCCAGTGATGCGCCCAGAGGCTTA 1843
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1844 GAGGGACAACACGGCCTGGATGGCCACATACATGGCTGGGGTGTTGAAGGTCTCAAACATGATCTGAGTCATCT 1917
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1918 TTTCTCTGTTGGCCTTGGGGTTCGAGGGGCCTCGGCCAACAGCACCGGGTGCTTCTCTGGGGTCATGCACAGCT 1991
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1992 CGTTGTAGAAGGTGTGGTGCCAGATCTTCTCCATGTCATCCCAGATGGTGATGATGCCATGCTCGATAGGGTAC 2065
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2066 TTCAGGGTCAGGATGTCGTGCTTGCTCTGGGCCTCATGGCCCATGTAGGAGTCCTTCTGGCCCATGCCCACCAT 2139
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2140 CACACCCTGGTGCCGGGGTCACCTGATGATGGAGGGGAACACAGCTCAGGGGCCATCCATCCCCAGCAAAGCCA 2213
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2214 GCTTTGCACATGCCAGAGCCATTGTCAATGATGAGCGCGGCGATCTCTATTTCCATTGCAACCTGTGGAAGAGC 2287
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2288 AGGGCGGTGGAGCCATGGGAAGACACGGTGTGGGGGCTGGTGGCAGCAAGTGACTGTATTACTGGATTTTGAAG 2361
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2362 TTAACAATTAGCCAAATACTGATTTTTGATGGAAATTTATTCTTAATTATTTTCTTTTAGAAAAAAATAGGAAA 2435
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2436 ACATATAACAATAGAATTACTTAATTAAATTGATTCCTTGGCTGGGTGGCTACGCCTGTAATCCTAGCACTTTA 2509
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2510 TGAGGCCGAGGAGGGTGGATTAGTTGAGGCCAGGAGTTCGAGACCAGCTTGGGAAACATGGCGAAACCCCATTT 2583
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2584 CTACTAAAAATTCAAAAATCAGCCAAGCATGGTGGTGCGTGCCTGTAGTCCCAGCTACCCAGGAGGCTGAGGCA 2657
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2658 TGAGAATTGCCTGAGCTTAGGAGGCAGAGATTGCAGTGAGCCGAGATTGTGCCACTGCACTCCAGCCTGGCAGT 2731
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2732 AGAACCAGACCCTGTCTCAAAAACAAAAAATCTGTCTAGGCTGGGCATGGTGGCTCACGCTTGTAATCCCAGCA 2805
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2806 CTTTGGGAGGCTGAGGCAAGTGGATCACCAGAGGTCAGGAGTTTGAGACCAACCTGGCCAACATGGTGAAACCC 2879
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2880 CGTCTCTCCTAAAAATACAAAAATTAGCCGGGCATGGTGGTACATGCCTATAATCCCAGCTACTTGGGAGGCTG 2953
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2954 AGGCAGGAGAGTGGCTTGAACCTGAGAGGCGGAGGTCGCAGTCAGCTTAGATTGCACCACTGTAAAGAAAAGAA 3027
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3028 AAAAAAAAGTCCATACATGAGTGTAGGGAATACTTTGTGAATTTTTAGACTTTTTATTAACCACCAGAGAATAT 3101
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3102 TTACTACACCTGGGTGTTTTTTAAAGAATACTGTTCTTATTCTGAAATAAGTAGACCGTTTTGCATATGATCAG 3175
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3176 CCAGTGTCCCTTACACAATTTATTTCATGTAATTTTCATCTTTCCCATGTAAATCTCAGTTCAGCCACTTAGTG 3249
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3250 GATCCAAGTCTCCAGGCAGCTGCCTTAGTCGTTCTGTGTCTCAAGTACTTTTAATCCATATTGTACAGTAAGGT 3323
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3324 GAATTTATAGATTTCAAGATCTATAAATTCTATAGATCTATAGGTGAATTTGGGGTGGAGCCAAGATGGCCGAA 3397
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3398 TAGGAACAGCTCCAGTCTGCAGCTCCCAGCATGAGCGATGCAGAAGACGGGTGATTTCTGAACTTCCAACTGAG 3471
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3472 GTACCAGGTTCATCTCACTGGGGAGTGTCTGACAGTGGGTGCAGGACAGTGGGTACAGTGCACTGAGCGTGAGC 3545
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3546 CAAAGCAGGGCGAGGCATTGCCTCACTCGGGAAGCACAAGGGGTCAGGGAATTCCCTTTCCTAGTCAAAGAAAG 3619
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3620 GGGTGACAGATGGCATCTGGAAAATCGGGTCACTCCCACCCTAATACTGCGCTTTTCCAACAGTCTTAGCAAAT 3693
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3694 AGCTCACCAGGAGATTATATCCCGCCCCTGGCTCGGAGGGTCCTACGCCCACAGATTCTCGCTCATTGCTAGCA 3767
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3768 CAGCAGTCTGAGCTCAAACTGCAAGGTGGCAGCGAGGCTGGGGGAGGGGCACCCGCCATTGCTGAGGCTTGAGT 3841
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3842 AGGTAAAGCGGCCCGGAAGCTCGAACTGGGTGGAGCCCACTGCAGCTCAAGGAGGCCTGCCTGTCTCTGTAGAC 3915
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3916 TCCACCTCTGGGGGCAGGGCATTGCCAAACAAAAGGCAGCAGAATCCTCTGCAGACTTAAATGTCCCTGTCTGA 3989
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3990 CAGCTTTGAAGAGAGTAGTGGTTCTCCCAGCACGCAGCTGGAGATCTGAGAATGGACAGACTGCCTCCTCAAGT 4063
Query 250 -------------------------------------------------------------------------- 249
Sbjct 4064 GGGTCCCTGACCCCCGAGTAGCCTAACTGGGAGGCACCCCCCAGTAGGGGCAGACAGACACCTCACACGGCCGG 4137
Query 250 -------------------------------------------------------------------------- 249
Sbjct 4138 GTACTTCTCTGAGACAAAACTTCCAGAGGAATGATCAGGCAGCAACATTTGCTGTTCACCAATATCTGCTGTTC 4211
Query 250 -------------------------------------------------------------------------- 249
Sbjct 4212 TGCAGCCTCTGCTGCTGATACCCAGGCAAACAGGGTCTGGAGTGGACCTCCAGCAAACTCCAACATTCCTACAG 4285
Query 250 -------------------------------------------------------------------------- 249
Sbjct 4286 CTGAGGGTCCTGATTGTTAGAAGGAAAACTAACAAACAGAAAGGACATCCACACCAAAACCCCATCTGTATGTC 4359
Query 250 -------------------------------------------------------------------------- 249
Sbjct 4360 ACCATCATCAAAGACCAAAGGTAGATAAAACCACAAAGATGGGGAAAAAACAGAGCAGAAAAAACGGAAATTCT 4433
Query 250 -------------------------------------------------------------------------- 249
Sbjct 4434 AAAAATCAGAGTGCCTATCCTCCTCCAAAGGAACACAGCTCCTCACCAGCAATGGAACAAAGCTGGATGGAGAA 4507
Query 250 -------------------------------------------------------------------------- 249
Sbjct 4508 TGACGAGTTGAGAGAAGAAGGCTTCAGACAATCAAACTACTCCAAGCTAAAGGAGGAAGTTCGAACCAATGGCA 4581
Query 250 -------------------------------------------------------------------------- 249
Sbjct 4582 AAGAAGTTAAAAACCTTGAAAAAAGATTAGACAAATCACTAACTAGAATAACCAATGCAGAGAAGTCCTTAAAG 4655
Query 250 -------------------------------------------------------------------------- 249
Sbjct 4656 GACCTGATGGAGCTGAAAACCACAGCACAAGAACTATCTGATGAATGCACAAGCCTCAGTAGCCGATTCGATCA 4729
Query 250 -------------------------------------------------------------------------- 249
Sbjct 4730 ACTGGAAGAAAGGGTATCAGTGATGGAAGATCAAATGAATGAAATGAAGCGAGAAGAGAAGTTTAGAGAAAAAA 4803
Query 250 -------------------------------------------------------------------------- 249
Sbjct 4804 GAATAAAAAGAAACAAAGCCTCCAAGAAATATGGGACTATGTGAAAAGACCAAATCTACGTCTGATTGGTGTAC 4877
Query 250 -------------------------------------------------------------------------- 249
Sbjct 4878 CTGAAAGTGACGGGGAGAATGGAACCAAGTTGGAAAACACTCTGCAGGATATTATCCAGGAGAACTTCCCCAAT 4951
Query 250 -------------------------------------------------------------------------- 249
Sbjct 4952 CTAGCAAGGCAGGCCAACATTCAAACACCACAAAGGTACTCCTCGAGAAGAGCAACTCCAAGACACATAATTGT 5025
Query 250 -------------------------------------------------------------------------- 249
Sbjct 5026 CAGATTCACCAAAGTTGAAATGAAGGAAAAGATGTTAAGGGCAGCCAGAGAGAAAGGTCGGGTTACCCACAAAG 5099
Query 250 -------------------------------------------------------------------------- 249
Sbjct 5100 GGAAGCCCATCAGACTAACAGCTGATCTCTTGGCAGAAACTCTACAAGCCAGAAGAGAGTGGGGGCCAACATTC 5173
Query 250 -------------------------------------------------------------------------- 249
Sbjct 5174 AACATTCTTAAAAGAATTTTCAACCCAGAATTTCATATTCAGCCAAACTAAGCTTCAGAAGTGAAGGAGAAATA 5247
Query 250 -------------------------------------------------------------------------- 249
Sbjct 5248 AAATCCTTTACAGACAAGCAAATGCTGAGAGATTTTGTCACCACCAAGCCTGCCCTAAAAGAGCTCCTGAAGGA 5321
Query 250 -------------------------------------------------------------------------- 249
Sbjct 5322 AGCACTAAACATGGAAAGGAACAACTGGTACCAGCCACTGCAAAAACATGCCAAATTGTAAAGACCATTGAGGC 5395
Query 250 -------------------------------------------------------------------------- 249
Sbjct 5396 TAGGAAGAACCTGCATCAACCAACGAGCAAAATAACCAGCTAACATCATAATGACAGGATCGAATTCACACATA 5469
Query 250 -------------------------------------------------------------------------- 249
Sbjct 5470 ACAATACTAACCTTAAATGTAACTGGGCTAAATGCTCCAATTAAAAGACACAGACTGGCAAATTGGATAAAGAG 5543
Query 250 -------------------------------------------------------------------------- 249
Sbjct 5544 TCAAGACCCATCAGTGTGCTGTATTCAGGAAACCCATCTCACCTGCAGAGACACACATAGGCTCAAAATAAAGG 5617
Query 250 -------------------------------------------------------------------------- 249
Sbjct 5618 GATGGAGGAAGACCTACGAAGCAAATGGAAAACAAAAAAAGGCAGGGGTTGCAATCCTAGTCTCATATAAAACA 5691
Query 250 -------------------------------------------------------------------------- 249
Sbjct 5692 GACTTTAAACGAACAAAGATCAAAGGAGACAAAGAAGGCCATTACATAATGGTGAAGGGATCAGTTCAACAAGA 5765
Query 250 -------------------------------------------------------------------------- 249
Sbjct 5766 AGAGCTAACTATCCTAAATATATATGCACCCAATACAAGAGCACCTAGATTCATAAAGCAAGTCCTTAGAGACC 5839
Query 250 -------------------------------------------------------------------------- 249
Sbjct 5840 TACAAAGAGACTTAGACTCCCACACAATAATAATGGGAGACTTTAACACCCCACTGTCAACATTAGACAGATCA 5913
Query 250 -------------------------------------------------------------------------- 249
Sbjct 5914 ACGAGACAGAAGTTAACAAGGATATCCAGGAATTGAACTCAGCTCTGCACCAAGTGTACCTAATAGACATCTAC 5987
Query 250 -------------------------------------------------------------------------- 249
Sbjct 5988 AGAACTCTCCACCCCAAATCAACAGAATATACATTCTTTTCAGCACCACACCACACCTATTCCAAAATTGACCA 6061
Query 250 -------------------------------------------------------------------------- 249
Sbjct 6062 CATAGTTGGAAGTAAAGCACTCCTCAGCAAATGTAAAAGAACAGAAATTATAACAAACTGTCTCTCAGACCACA 6135
Query 250 -------------------------------------------------------------------------- 249
Sbjct 6136 GTGCAATCAAACTAGAACTCAGGATTAAGAAACTCACTCAAAACCGCTCAACTACATGGAAACTGAACAACTGG 6209
Query 250 -------------------------------------------------------------------------- 249
Sbjct 6210 CTCCTGAAAGACTACTGGGTACATAACGAAATGAAGGCAGAAATAAAGATGTTCTTTGAAACCAACGAGAACAA 6283
Query 250 -------------------------------------------------------------------------- 249
Sbjct 6284 AGACATAACATACCAGAATCTCTGGGACACATTCAAAGCAGTGTGTAGAGGGAAATTTATAGCACTAAATGCCC 6357
Query 250 ------- 249
Sbjct 6358 ACAAGAG 6364