Nucleotide Global Alignment

Description

Query:
ccsbBroad304_10792
Subject:
NR_110767.1
Aligned Length:
2662
Identities:
214
Gaps:
2418

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  AAAGCGGAAGTGTGGCGCTTAACGGGAACCGGCGCCCGGAATGTCAGCGTGTGAAGTAGGCGCTGGCAACGCGG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  GGTTACCCGCTGTTATTGAGGAGTAACGGCCCAGCGGACCACCCAGGCTTGAGGCAGCGGCGGGAACCACTCGG  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  TTTGCTGCGATACCATGGAAGGAGGCGGGGGAAGCGGCGACAAAACCACAGGGGTATTGGCCGGCTTTTTCGGA  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  GCCGGCGAAGCAGGTTACTCGCACGCGGATTTGGCTGGCGTCCCGCAGTCAGGACCTCGTTCTGTCACCCATGT  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  TGGGGTGCGGTGGCATGATTATAGTTCACTGAAGCCTGGCACTCCTGAGCTCAAACAATCCTCCCCTCTAAGCC  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  TCCTAAGTAGCTGGGAATCTAGTAACTGGTATGAACCCTCTGTGTCCTTATTTAAATGTGGATCCACGATACCT  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  CGTGCAGGATACAGATGAGTTCATTTTACCTACCGGAGCTAATAAAACCTGGGGCAGATTTGAGCTGGCCTTCT  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  TTACGATTGGAGGGTGTTGCATGACAGGGGCTGCGTTTGGGGCAATGAATGGTCTTCGGCTAGGATTGAAGGAA  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  ACCCAGAACATGGCCTGGTCCAAACCAGGAAATGTACAGATTTTGAATATGGTGACTAGGCAAGGGGCACTTTG  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  GGCTAATACTCTAGGTTCTCTGGCGTTGCTCTATAGTGCATTTGGTGTCATCATTGAGAAAACACGAGGTGCAG  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  AAGATGACCTTAACACAGTAGCAGCTGGAACCATGACAGGCATGTTGTATAAATGTACAGTGTCAGAGATGGCT  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  TTGGATTCCCCGTTCTGTGTGCTGCTGTCTGGCTCCTGAACCCAGCTGTAGAGGTGTGTGTCAATCCCAACTGG  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  TGAAGTACTGAGAAGAAGCTACACAAAAGGCAGCAAAGTATTAGTAAGTGTACCTCTGACATTTTAACCACCTC  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  TGACTTTTCCATGGAATGGACAAGTAGTAGTCTCTGTCAGAGCTACATTTTAAAGGAGAAAAAGAAACGTGAAG  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  TCATGAACTGTTTATTTATGCTGTTATTTTTGTGTTTACTCACCTCATTTATATTGACTTGTAAATTAGTAATT  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  TCTGAACTATTATTTATCAATTCATTGCCTACATGTCAGCAAACAAATTTTCTTCTTAATAAAGAATCCAGTTG  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  CTGGGCACAATGGTTCACACCTGTAATCTCAGCACGTTTGGAGGGCAAGGCAGGAGGATTCCTTGGGGCTAGGA  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  GTTCAAGACCAGCCTGGGCAATATAGCAAGATTTCATCTCTACAAAAAAATGAAAACATTGGCTGGGCATGGTG  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  GCTCATTCCTATAGTTCAGGCTACTGAGGAGCCTGATGTAGGAGGATCACGTGACCCCAGTAGTTTGAGGCTGC  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  AGTGAGCTATGATCCTAACACTGCTCTCCAGCCTGGGTGACACACCAAGTTGCCATCTCTTCAAAAAAGGAATC  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  TAGAGACATCAGTGTGTGCACAAGCATGGTTTGTGAATTTGGAAGTGTGTATGTGCATAGTTGTGCTCAAGAAT  1554

Query    1  ------------------------------------------------------------ATGGAGTCTCGCTC  14
                                                                        |||||||||.||||
Sbjct 1555  GTGTTGATGATTATACCTTCTCAGAATGAAGGTAATTTTTTTTTTTTCTTTTTTTTTGAGATGGAGTCTTGCTC  1628

Query   15  TGTTGCCCAGGCTGGAGTGCAGTGGCCTGATCTCGGCTCACTGCAACCTCTGCCTCCCAGGTTCAAGCGATTCT  88
            ||||| |||||||||||||||||||  ||.||||.|||||||||||||||||||||||.|.|||||||..||||
Sbjct 1629  TGTTG-CCAGGCTGGAGTGCAGTGG--TGCTCTCAGCTCACTGCAACCTCTGCCTCCCGGCTTCAAGCAGTTCT  1699

Query   89  TCTGCCTCAGCCTCCAGAGTAGCTGGGACTATAGACATGCACCACCACGCCCGGCTAATTTTGTAT-TTTTGGT  161
            .||||||||||||||..||||||||||||||.||.||..|||||||||.|||||||||||||.|.| ||||.||
Sbjct 1700  CCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCACACACCACCACTCCCGGCTAATTTTTTGTGTTTTAGT  1773

Query  162  CGAGACGGGGTTTTGCCATGTTAGTCAGGCTGGTCTTGAACTCCTGACCTCAAGTGATCCA-CCACCTCGGCCT  234
            .|||||||||||||.|||||||.|.||||.||||||.||.|.||.|||||  .|||||||| ||||||.|||||
Sbjct 1774  AGAGACGGGGTTTTACCATGTTGGCCAGGATGGTCTCGATCCCCCGACCT--TGTGATCCACCCACCTTGGCCT  1845

Query  235  CCCAAAGTGTTGAGA-----------------------------------------------------------  249
            ||||||||||||.||                                                           
Sbjct 1846  CCCAAAGTGTTGGGATTACAGGTGTGAGCCACCGTGCCTGGCCTGAAGGTCATTTTTATAAAGATCTCTCCACG  1919

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 1920  TCTTAGATTTGATTCTTCCTTTAAATATTTTTCTCATTGACATTTGAAAGCACCTGACCTTATATAAAATGAAC  1993

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 1994  AATTTTCATAACTCCATAAAAGGAGAATTATGGCATCATCTATTTCTTTCTCTTGTCTCATAAATCTAAACCAT  2067

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2068  CAACCTGCTTATTTTTGTATACTGTCACACTGTGTATTCCCTGCATTGAATGCCTGTCTGTTGACATTATCTGT  2141

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2142  AAAAATTGTGGGAAGTTTTCTGCACCCTGAAATTTCTGTTATGCGGATTAAATATCCACTATCCATGTTTTTCC  2215

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2216  AAGTCTTACAGTAGAAAGGGTAAATGCAGCCCTCACAGCAGCCTGTTGTTCGTCCTGCAAATGTGTTTCCATCA  2289

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2290  CATTACACAAAGCCTCTTTGTCTTCGTGGTTCTACCCTACTAATAAGTTTTTTAAAAAATTATGTAATGTGTGT  2363

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2364  ATATACAAATACCTATATGTATGTGTGTACACATACAGCTGATATCTGCTGAGATTATGTATGCATGAACTATA  2437

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2438  GAATTAACTTGTAATTTTAAGAAAATAAATTATTTTGTAAAGATAAATCTCATGTTTAAGAAGAGGAATTACAG  2511

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2512  TTGAATCATTTAGGGATGCCTCAGCCTAAACATAATATGGAAAAAGCCATAACCAAAAGTCATTTTAGAGTACT  2585

Query  250  ------------------------------------------------------------------------  249
                                                                                    
Sbjct 2586  GCTAGGTTACTCAACCTATCATCACATTTAATTAAAATGTCAGTTTGAACCATGAAAAAAAAAAAAAAAAAA  2657

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