Nucleotide Global Alignment

Description

Query:
ccsbBroad304_10792
Subject:
NR_126000.1
Aligned Length:
1874
Identities:
214
Gaps:
1631

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  CGATGATGAGTGGTGGGGATAGGGTGGGATTCTAGACCCCCACTGCCAAGTCCTGTGCTCAACCACTAGCCATA  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  AACATTGCTATGGACTGAGCACTCACAACGTGCCACACACGGCATTGGGGAATGTATGTGCCGTGCCTCGCCAT  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  TGCCCCACTGGAGCCAGTACTATTAACCCCATTTTACAGATAGGCAAATAGGGCACAGAGAAGTTATGCAACTT  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  GCCCAAGATCACACAGCCAATGAGGGGCAAAGCTGGGATTAGAACCCAGGGAGACCAACTCTTATGCATTGTGC  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  TATAAATGAATAAATGAAGGAACCTCAGCTGCAAAATCTCCAAGAGGAACAGTGACTCTGTAGAGTGCCTCACC  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  ACTCCCCGACACCCTCTCAGTAGGACGGGGCAGGAAGACAGGAGGAACTGAAGCCCCCTGAGGTGCAGACCCCA  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  AGGGGCTGCTGCTGTGAAGGCCAAGGGTGGAAGGGAGAAGGGGCCGGGAAACAAGAGTCTTGGAGTGTGCTGCT  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  GCTCAGTGGCTCCAGAGCCGAGGGGGTCTTGGTGCAGCTTGATGTGGCATCTGGGCCCAGTGCCCTCAAGTGCC  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  ACCATCTCAGGCTGCGCTGCAGCATCCGCTGCTGCAGGCCCTGGAAGAAGGAGCTAGAGAAGGGGCAGGGTCTG  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  GCTCTGTGACCCAGGCTGGAGTGCAGTGGGACAATCTTAGCTCACTGCAACCTCTGCCTCCTGGGTTCAAGTGA  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  TTCTCCCGCCTCAGCCTCCCGAGCAGCTGGGATTACAGGTGCGTGCCACCACGTCTGGCTAACCGAGCTAGTGC  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  TCCACCTGCTTCACTGGCTGGCCTCATCATGCTCCCGGGGTGGCTGGGAGCCCAAGCAGCTGATCAGAGGTGGA  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  GCTGGTCCCCAGGCTCAGGGATCCCAGACTCCAGAGGCCACCCCTACAACCACACCAGTACTTCTGCCTGCACT  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  CACTTATAAAGATAAGAAAGCTGAGCCCAGGGGAAGATCATTTCCCCAAACTCCAAATAGCAGCAGACCTGGGA  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  CTCATCTAGGCCCAGGAGGGTGCCCCGGGAGAGCTGCCAGGAGATATGAACTGTGCCCTGAAGTCCAAAGGCCA  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  GAGGATGGGCTGGAGAGGGAGGGCCTGGGGGTTGTGGGGCAGGCATGTGAGCAGTGCCCCCACATTCTGAAAGG  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  TCACGGTGAATTGAATTCCCCTGAAGTTGCAGGGGTACACTGAAAGAGGCTGAGGGTCCATGTGGACCATGTGG  1258

Query    1  --------------------------------------------ATGGAGTCTCGCTCTGTTGCCCAGGCTGGA  30
                                                        |||||.|||||||||||||.|||||     
Sbjct 1259  GTGTGTGGCTTTCAAGGACAGAATTCCTTTTTTTTTTTTTTGAGATGGATTCTCGCTCTGTTGTCCAGG-----  1327

Query   31  GTGCAGTGGCCTGATCTCGGCTCACTGCAACCTCTGCCTCCCAGGTTCAAGCGATTCTTCTGCCTCAGCCTC-C  103
            ||||||||||.||||||.|||||||||||||||||||||||.||||||||||.||||||||||||||||||| |
Sbjct 1328  GTGCAGTGGCATGATCTTGGCTCACTGCAACCTCTGCCTCCTAGGTTCAAGCCATTCTTCTGCCTCAGCCTCTC  1401

Query  104  AGAGTAGCTGGGACTATAGACATGCACCACCACGCCCGGCTAA-TTTTGTATTTTTGGTCGAGACGGGGTTTTG  176
            | |||||||||||.||.||.|..|||||||||||||.|||||| ||||||||||||..|.||||.|||||||.|
Sbjct 1402  A-AGTAGCTGGGATTACAGGCGAGCACCACCACGCCTGGCTAACTTTTGTATTTTTAATAGAGATGGGGTTTCG  1474

Query  177  CCATGTTAGTCAGGCTGGTCTTGAACTCCTGACCTCAAGTGATCCAC-CACCTCGGCCTCCCAAAGTGTTGAGA  249
            |||||||...|||||||||||..||||||||||||||.||||||||| ..||||||||||..||||||.||.||
Sbjct 1475  CCATGTTGACCAGGCTGGTCTCAAACTCCTGACCTCAGGTGATCCACTGGCCTCGGCCTCTTAAAGTGCTGGGA  1548

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 1549  TTACAGGTGTGAGCCACCACGCCCAGCCAAGGACAGAATTCTTAACCCTGCAACTGCTCGCTTCCATTCCTCCT  1622

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 1623  GACATCCCCTCCGGGAAGCTGGCTTCTCCTGATCGCCACCCTCCCCTCACCTACAGCCTTCTTCTGGGCTCCGA  1696

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 1697  ATTCCATCAGTGACCATCTTGTGTGGGGGCAGCACCCAGGTCTCAACACAGGACCTTCTTGCTCCTGACTCCCA  1770

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 1771  CTGGGATTTACAGCAAGCTGCTCCAGCCCTCTGAGCCTCAGTTTCTCTAGTTGTGTAATGAGGCCAATGGGAGA  1844

Query  250  ------------------------  249
                                    
Sbjct 1845  GGAGATAAAAGCTTGATCCCTGGC  1868

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