Nucleotide Global Alignment

Description

Query:
ccsbBroad304_10792
Subject:
NR_135688.2
Aligned Length:
5144
Identities:
216
Gaps:
4895

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ACATTGCATCGCTGGGATAAACGGAGCTGGACGACTCAGTCTCTTGGTCTGTGGCTGCTGCGGTTACCTGGATG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  GGCGAGCACCTCTGAGGCTGGCTTTGTTACCTGGGCAATAAGGGACTAGCAGTTCAGCCGTTTTCTATGCCTGC  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  TGGATTTGTTTGTATTTGTTCCCAGCCACTGCTCATGTAATGTACTCCCTTAACCAGGAAATTAAAGCATTCTC  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  CCGGAATAATCTCAGGAAGCAATGCACCAGGGTGACAACGCTAACTGGAAAGAAAATTATAGAAACATGGAAAG  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  ATGCCAGAATTCATGTTGTGGAAGAAGTAGAGCCGAGCAGTGGGGGTGGTTGTGGTTATGTGCAGGACCTTAGC  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  TCGGACCTGCAAGTTGGCGTTATTAAGCCATGGTTGCTCCTAGGTGACTCATATTCTTAATGTTGCATATGGAG  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  TTGAAAATGCTTTCCTCAGTGACTTTACATATAAGAGCATTTCTATATTGGATCTGCCTGAAACCAACATCCTG  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  TCTTATTTTCCAGAATGTTTTGAATTTATTGAAGAAGCAAAAAGAAAAGATGGAGTGGTTCTTGTTCATTGTAA  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  TGCAGGCGTTTCCAGGGCTGCTGCAATTGTAATAGGTTTCCTGATGAATTCTGAACAAACCTCATTTACCAGTG  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  CTTTTTCTTTGGTGAAAAATGCAAGACCTTCCATATGTCCAAATTCTGGCTTCATGGAGCAGCTTCGTACATAT  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  CAAGAGGGCAAAGAAAGCAATAAGTGTGACAGAATACAGGAGAACAGTTCATGAGTTGCATTGTAGCAGACAAT  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  GGACAACTGTAGTTTCTGAATTGACTTCTATAGCCATCTTTTCCCTTTTTTGGAGAGTAGACTAGCAAAACTCC  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  CTTTTTTCTCTTGCCTTTTTTATGCATAAATGGAGGTCAATTTGATTGTCCTGACCTACTGTATAAGTAAATTT  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  CAAATGTCATTACTTTCTCTTTGTTATTATAATGTGTGATTAAATGCTTTTTTAAATTGCTAAGGGAAAATAAC  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  AAAGTGTTAGTAATCATTGCTTTCTGTAGAAGAAAAAGGTTTAAATTTAAAATGTGTATTTAGAGCATGGAGAG  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  AATCATTTAATGAAGCCTATTTTTCTGTTCCAGCAACTGTTTTTATGAAAGAAAAACTTGAAATGCTACTTAAC  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  TTACTATTTCAAAGGGAAGTATATTTCTTTTTAAAGAATCTTTTTAAGATTAAAAATGAATACCTTAAATCTCC  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  CAAAAGAGATAACCAGTATCTGAAGGTTTATACAATATTTACACAGTGGCTACAATATTCACAAAATTCTTATG  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  TTCTCTTATGAAAAATATACACTTTTCATTTTGTCTTCTTCTTTTTTTTTCTTTTTTTAGATGGAGTTTGGCTC  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  TTGTCACCCAGGCTGGAGTGCAATGGCGCAATCTCAGCTCACTGCAACCTCTGCCTCCCGGGTTCAAGCGATTC  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  TCCTGCCCCAGCCTCCCATATAGCTGGGATTATAGGTGCCTGCCACCATGCCCAGCTAATTTTTGTGTTTTTAG  1554

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1555  TAGAGATGGAGTCTCACCACATAGGCCAGGCAGTCTCGAACTCCTGACCTCAGGTGATCCACCCACCTTGGCCT  1628

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1629  CTCTAAATACTGGGATTACAGGCGTGAGCCACTGCATCCGACCTCATTTTGTTTTTTTCAATTCTGTTATCGGC  1702

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1703  ATTTCTTTCTTTTTTTTTTTAATGTATAGGTGTTCTGTCATACGTTATTGTGAGCTTTGGTTCTTTGAACAGGT  1776

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1777  GATCTATTCTCTTACATTTTGTGCTTTTTATCTTGGGTGCCTAGCATTCTGTTTTTTTGATCCTATGTCATAAT  1850

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1851  TTTTTGAGAAAATGTTTGATACTGCAAGATCATTGTTTAGTGGTCTGTTTTCTACTTCAGTATTCTACCAGAGA  1924

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1925  ACATATTTTTTAGGGGAGAAGGGTTATGGTTTTGTAAGAAACTTTAAATATACTTTTAGGAGACCCACAATCAT  1998

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1999  TTACAGTTTTATCTTTGGCCTTTGAATAGGTTCTTTTTTCTTTAATGTCTCCGTATTTGAAGAACTGAGCTCTG  2072

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2073  TACATTATAAATTTGCTTAAAGATTTTGATTTTTTCTTCAGAATATGGTATACTTAAAATTAATTAATTAAGAC  2146

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2147  AGTTTCTTTTTTCTTTTCTTTTTTTTTTTTTTCGAGACAGGGTCTTGCTCTGTCACCTAGGCTAGAGTGGAGTG  2220

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2221  GCATGAACACAACGCACTGCAGCCTCTACCTCCTGGGCTCAAGCAGTCCTCCCACCTCAGTCTCCTGAGTAGCT  2294

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2295  GAGACTACAGCTGTGCGCCACCACATCTGGCTAATTTTATTTTTATTTTTGTAGAGACAGGAGTCTTGCCATGT  2368

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2369  TGCCCAGGCTGATCTCAAACTCCTAGGCTTAAGTGATCCTCCCGCCTTAGCCTCCCAAGTGCTAGGATTACAGG  2442

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2443  CATCAGCCACCACGCCTGGCCTGATAGTTTCCACATAGTTTTTCATGACTTAGAAGATATCATTGCCATGTAGG  2516

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2517  TTTTATTTTTAAAAGTCTTGAGCTCTTCTTAAATATACATTATAAAGAGCAAGCATAGATGGAAAGTGCATATT  2590

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2591  GAACACATCTGTGCATTTGAGAAGGCAGGCTTTCATATGCTGTCATGAGCAAAAAGTAGAAGTGATAAATGCAA  2664

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2665  GTTATGTTTTGAGATTGCTTACACCGTGACAAGATGCCATCACTTGTGATGTTATGAACTGTTATAAACTCTTT  2738

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2739  GCTTCTGCTAAGAAGCAGTCTAAATATAATCAACGTACAGTGAGCTCTTTGAAGCCAACCAAGGCAGGCAGAAC  2812

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2813  CCTCTTAAATATGAGACTGATGTATAGGTTCTCTCTATGGTCAGTATCACTGGATAAGCCTTCTCCTTTCATAA  2886

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2887  GAAAGGATGTATTTAAATACATTTTATTTTGCTAAATCCTGTTTAGTTTTCAGCCATTAAATGTCACATGAAGC  2960

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2961  CTTGATAGAATTTGTTCATAATGGCTCATGTATTATTATTATTTTTGAGATGGAGTTTTGCTCTTAATGATATT  3034

Query    1  -------------ATGGAGTCTCGCTC-TGTTGCCCAGGCTGGAGTGCAGTGGCCTGATCTCGGCTCACTGCAA  60
                         |..||||.|.|||| |.||||||||||||||||||||||||.||||||.||||||||||||
Sbjct 3035  ATTATTATTTGAGACAGAGTTTTGCTCTTATTGCCCAGGCTGGAGTGCAGTGGCGTGATCTTGGCTCACTGCAA  3108

Query   61  CCTCTGCCTCCCAGGTTCAAGCGATTCTTCTGCCTCAGCCTCCAGAGTAGCTGGGACTATAGACATGCACCACC  134
            ||||||||||||||.|||||||||||||.|||..|||||||||..|||||||||||.|||||.||||..|||||
Sbjct 3109  CCTCTGCCTCCCAGCTTCAAGCGATTCTCCTGTATCAGCCTCCCAAGTAGCTGGGATTATAGGCATGTGCCACC  3182

Query  135  ACGCCCGGCTAATTTTGTA----TTTTTGGTCGAGACGGGGTTTTGCCATGTTAGTCAGGCTGGTCTTGAACTC  204
            |.||||.||.|||||||||    ||||||||.|||||.|||||...|||||||.|||||||||||||.||||||
Sbjct 3183  ATGCCCAGCAAATTTTGTATTTTTTTTTGGTAGAGACAGGGTTCAACCATGTTGGTCAGGCTGGTCTCGAACTC  3256

Query  205  CTGACCTCAAGTGATCCAC-CACCTCGGCCTCCCAAAGTGTTGAGA----------------------------  249
            ||||||.|||||||||||| |.|||.||.|||||||||||.||.||                            
Sbjct 3257  CTGACCGCAAGTGATCCACACGCCTTGGTCTCCCAAAGTGCTGGGATTACGGTGTTAGCCACTACACCTGGCCT  3330

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 3331  GGATTGTGTATTATTTATGTCTGTAGTTTATATGCTTAGTTGTTGCCTATAGTGATCTGGGTAAGATTCAAACA  3404

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 3405  TTTATCTTTTGTATCTTCTACAGAAGTGCTTTGAGCATCAAATTTGTTTTAACGTTAAATTGTAGTTTGCTGTA  3478

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 3479  TTAAAATAGATCAATGAATATAATTCAGTCTTTTAGGGGCACCAAGTAAAGCATAAGGTCATATATACTATACA  3552

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 3553  ATATGTTTATTGCACTTCCCATGGGGATAAATCACTCTGTCATTCCTAGTTATTTTAAAAAAAGAACTTTATGA  3626

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 3627  TTACGGTCCTCTTTCTCACATACTGCAAACTTAAAAGATACATACACCAAATATAGGTCTGTTTTAAAGGAGAG  3700

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 3701  GAAAAATAGTTCAAGGAGTTTTTGCCTCTTTGTTTTTCAATAGATTATTCTGCCATTTTTTAAAGGAAAGGGAA  3774

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 3775  AATGAAAACAGCATGTCTTTTTAAACATTGAAAAGAAATATGGAGGCTTTAAACCGCAAACTGAAAAAGCTGAG  3848

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 3849  TAGAACAAAGGCAGTGGAGCATACAATACAATTCTATTTATTTGAGGTTAATTGAAGTTAATAATTTTTAAATT  3922

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 3923  TTTTTCTAATTTTATGCCTTAAAATAGGTTTCTGATTACATAAAATTTGAATAGAACACTCAAGAAGTATGTAG  3996

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 3997  ATTTTTGAAAAACCCAAACAATATTCTTCTTAGATTTTTGGAGGCAAAATTTAGACCAGTATACTAATTCAAAA  4070

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 4071  GACAAATATTTCAGAGGAAGTGGAGTACAGTATTTAACATTTTGTTTGCAATTTTACTTTTTCTTCCCTTCTTC  4144

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 4145  CCTATTGAACCTTGATTAAAATGTATGAATACAATACTTGGATTTTTTTTTTTCAGCTTAGACTCTGATAATTT  4218

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 4219  CAGTGGTAGTGGGGAAACCTGAATTTGTCAGCATGATTATTTGTAACTCAGATTGTTCAAATGTATATAGAAGG  4292

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 4293  TCCCCTTCAAGTGTTGTTTCTCCAAGTAGTCATAAATGTAGCAAGTATAAATCAGAATATCATCTTATAATCTT  4366

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 4367  ACAGAGTTAACCTAATGAGTCAATACCTTTATAAGCAAAACCATGATAAATTTAAAAACAACAGAAATGTGGCA  4440

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 4441  TGATTACTTATTTATTTGTTCCAGGTGACTCTAAATAGTTGATTTTTCTGCCTGAAGGATCCTGAACATATTTA  4514

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 4515  GTTACCCTGTAGTTATTTAGGAATTTAAACCAGAAGACTTTGAAGTTGTATATTCTTGCAATGCATAAAATGAC  4588

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 4589  ATTATAATCAACAAACTTATGGTTTGTTTCAATTGATGCACACAAAAAATAACTTATAGTTAGACTTTTCTATT  4662

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 4663  TCAAGTAAAGCTTTGAGTTACTTGTTTTTATACATATTCATCATGTACCCTTTATTGTTTCTAGGTGTTGATAT  4736

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 4737  ACTTTAATAAAAATGATATGTTTAATATTTTCCCATTAATATATTTCTTTGAAGCTATTTGTTTTAAAAGATGT  4810

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 4811  AACACTTATTTGCTGTCAAATTCTGAATTAAAAAATCTGTTGGTGGCCAGGCGCAGTGGCTCATGCCTGTAATC  4884

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 4885  CCAACATTTTGGGAGGCCAAGGAGATGGATCACTTGAGGCCAGGAGTTCAAGACCAGCCTGGCCAACATGGCAA  4958

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 4959  AACCCCATCACTAAAAATACAAAAATTACCCGGGCATGGTGGTGGGTGCCTGTAATCCCAGCTTCTTAGGAGGC  5032

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 5033  TGAGGTAGGAGAATTGCTTGACCCTGGGAGGTGGAGGTGGCAGTGAGCCGAGATAGCACCACTGCACTTCTAGT  5106

Query  250  --------------------------------------  249
                                                  
Sbjct 5107  TGACAGAGTGAGACTCTGACTCAAAAAAAAAAAAAAAA  5144

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