Nucleotide Global Alignment

Description

Query:
ccsbBroad304_10792
Subject:
NR_144490.2
Aligned Length:
2096
Identities:
216
Gaps:
1851

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  AGTCTGGGAGTCTTTGGAGTAAGAATGGCCTTGGAAGGGATGAGCAAACGGAAGAGAAAGAGAAGTGTCCAGGA  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  GGGAGAGAATCCTGACGACGGCGTTCGCGGGAGTCCGCCGGAAGACTACAGGCTTGGACAGGTCGCCAGTAGCT  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  TATTTCGCGGCGAACACCATTCCAGAGGTGGCACCGGTCGGCTGGCGTCCCTCTTCAGTTCTCTGGAGCCCCAG  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  ATTCAACCCGTGTACGTGCCTGTGCCTAAAGTAAGTCACTGGGCTTTCTTCCCGAATAGCTCGTTAGAACCACT  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  TACATACAAAGCAATCTTCTTACCTACCGCGTGAAGCGTGATTTCTAAAGGGGGCAGACAGGATTCATTTTAAG  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  TAACCTTTCATGACTCTTACATACCAGTGAGAGAGAAGAGATTCTCATTTAGAAAGACTGAATTATGGCTTAGG  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  GTCAGAATTCTAGAAGTATGGGGTCTCAAATATAACTTCAAACTTTTAAAAAGCAAACCATCAAAAAAACGAAA  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  CGGAATGAGGAGGAAGAAAGTACATCCCAGATTGAAAGACCACTTTCGCAAGAACCTGCCAAAAAAGTGAAAGC  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  GAAGAAGAAACACACTAACGCAGAAAAAAAGTTGGCAGACAGGGAAAGCGCTCTAGCGAGTGCTGATTTAGAAG  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  AAGAAATTCACCAGAAACAAGGGCAGAAAAGGAAAAATTCTCAACCTGGTGTTAAAGTAGCAGATAGAAAAATA  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  CTTGATGACACAGAAGACACAGTTGTCAGTCAAAGAAAGAAAATTCAAATCAACCAAGAAGAAGAGAGATTAAA  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  GAATGAGAGAACTGTGTTTGTTGGGAATTTGCCTGTTACATGTAATAAGAAGAAGCTGAAGTCGTTTTTTAAAG  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  AGTATGGACAAATAGAATCTGTACGATTTCGTTCTCTGATTCCAGCAGAGGGAACGCTATCCAAAAAGTTGGCA  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  GCAATAAAACGTAAAATTCATCCTGATCAGAAAAATATTAATGCCTATGTTGTGTTTAAGGAGGAGAGTGCTGC  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  CACGCAAGCATTGAAAAGAAATGGGGCCCAGATTGCAGATGGATTTCGTATTAGAGTTGATCTCGCATCTGAGA  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  CCTCATCTAGAGACAAGAGATCGGTTTTTGTGGGGAATCTCCCTTATAAAGTTGAAGAATCTGCCATTGAGAAG  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  CACTTTCTGGACTGTGGAAGTATCATGGCCGTGAGGATTGTGAGAGACAAAATGACAGGCATCGGCAAAGGGTT  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  TGGCTATGTGCTCTTTGAGAATACAGATTCTGTTCATCTTGCTCTGAAATTAAATAATTCTGAACTCATGGGGA  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  GAAAACTCAGAGTCATGCGTTCTGTTAATAAAGAAAAATTTAAACAACAAAATTCAAATCCACGATTGAAGAAT  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  GTCAGTAAACCTAAGCAGGGACTTAATTTTACTTCCAAAACTGCAGAAGGACATCCTAAAAGCTTATTTATTGG  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  AGAAAAAGCTGTTCTCCTTAAAACGAAGAAGAAAGGACAGAAGAAAAGTGGACGCCCTAAGAAACAGAGAAAAC  1554

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1555  AGAAATAACAACCAGGAACTGCTTTTTCTTTTCCTGCTGAGTACTGCTAATAAAAGTGCTATTATCTGCTGATA  1628

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1629  GCATCGTCTGCTATTCATGTGTTGAGTTTTATACTTCTTTATGGATGGTGTATGTGAAATGTGGAGACTTCCAC  1702

Query    1  -------------------------------------------------------------------ATGGAGT  7
                                                                               |||||||
Sbjct 1703  ATTCTCAGTTTATTCACATTGTGATACTACCTTTGAAGGTTTTTTTGTTTTTGTTTTGTTTTTTGAGATGGAGT  1776

Query    8  CTCGCTCTGTTG---CCCAGGCTGGAGTGCAGTGGCCTGATCTCGGCTCACTGCAACCTCTGCCTCCCAGGTTC  78
            .|.|  ||||||   |||||||||||||||||||||.||||||.|||||||||||||||||||||.|..|||||
Sbjct 1777  TTGG--CTGTTGTCTCCCAGGCTGGAGTGCAGTGGCGTGATCTTGGCTCACTGCAACCTCTGCCTTCTGGGTTC  1848

Query   79  AAGCGATTCTTCTGCCTCAGCCTCCAGAGTAGCTGGGACTATAGACATGC--ACCACCACGCCCGGCTAA--TT  148
            |||||.||||.||||||||||||||..|||||||||||.||.||.|  ||  .||||||||||.||||||  ||
Sbjct 1849  AAGCGCTTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGATTACAGGC--GCCTGCCACCACGCCTGGCTAATTTT  1920

Query  149  TTGTATTTTTGGTCGAGACGGGGTTTTGCCATGTTAGTCAGGCTGGTCTTGAACTCCTGACCTCAAGTGATCCA  222
            ||||||||||.||.||||||||||||..|||||||.|.|||||||||||.|||||||||||||||.||||||||
Sbjct 1921  TTGTATTTTTAGTAGAGACGGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAGGTGATCCA  1994

Query  223  CC-ACCTCGGCCTCCCAAAGTGTTGAGA----------------------------------------------  249
            || .|||.||||||.|||||||.||.||                                              
Sbjct 1995  CCTGCCTTGGCCTCTCAAAGTGCTGGGATTACAGGCGTGAGTCACTGCACCCAAGCCTCCTTTCTCTTTTGCCT  2068

Query  250  ------------------------  249
                                    
Sbjct 2069  ATTAAACCTCTGCTCTTAACCTTA  2092

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