Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_10792
- Subject:
- NR_145973.1
- Aligned Length:
- 6480
- Identities:
- 216
- Gaps:
- 6238
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 CCGTGCCCCTGCTCGCGCTGCAGCCCGTGGAAGGGTTCCGTCCAGCGTATCCTTCAGATCTTGCTGTAGGCCTC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TGGTGTCTGTGCGCGCGCGGCAGGGGCGGCGGCGGCGACGGCCGGAGGTGTACGGTCAGCGGGTTGCGGAGGAT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CGTGCGGGTCGCAAAGGGAAGCCGAGTGCTCCTGCGGCTCCCAGACTGCAACCAGGAACTAACCTGTCAGGTAC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TGAGAGGCTTTGAAGATGGCTCTTCAGGTTGGGGACACACCTTTATTAAGGGGCAAGACTGCTGCCAGGAGTTG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 ATTCACATACTCAGAGGTGTAAATCCAAACCGCTTCCAACTCAAGGCAAGTAACAGCCCACGGTGTTCTGGCAG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GAAAACATCAGCTAAGAAAGGAAACTGGGTCCTATGGCTTGGACTTTCCAACTCTGACAGACCGGCAGGACAGA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 AACAACTGGTTCAGGAGCCCTTGCCAGCCTCTAGAGAAATCCCAGAACACTCAGCCCTGATGACACATTAATAC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CCTGCACATATTGGAGACTGCTGACCACGCATACTCACCAAGCCACAGACTTGTCTTCCACAAGCACGTTCTTA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 CCTCAGCCACAAAGTGCCCAAGCCACATGTACTAAAGGTTGAAATCAGAGACATGTACAGGGTATTAAACAGAT 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 ACCAAGGGGAACAGTTAACTTGAATATAGCTTGAATAGAAAGTCAAAATCAGCAACAAGTCTACAATCCAGTGC 740
Query 1 -------------------------------------------------------------ATGGAGTCTCGCT 13
|.|.||||||||.
Sbjct 741 TGATATCAGATACAAGCTTCAAGGACAACTTTCTGTGTATGTTTTTTTTTTTTTTTTTGAGACGTAGTCTCGCC 814
Query 14 CTGTTGCCCAGGCTGGAGTGCAGTGGCCTG--ATCTCGGCTCACTGCAACCTCTGCCTCCCAGGTTCAAGCGAT 85
|||||||||||||||||||||||||| || ||||||||||||..||||||||||||||||||||||||.|||
Sbjct 815 CTGTTGCCCAGGCTGGAGTGCAGTGG--TGCAATCTCGGCTCACCACAACCTCTGCCTCCCAGGTTCAAGTGAT 886
Query 86 TCTTCTGCCTCAGCCTCCAGAGTAGCTGGGACTATAGAC--ATGCACCACCACGCCCGGCTAA-TTTTGTATTT 156
|||.||||||||||||||..|||||||||||.|||||.| ||| ||||||.|||.|||||| ||||||||||
Sbjct 887 TCTCCTGCCTCAGCCTCCCCAGTAGCTGGGATTATAGGCGAATG--CCACCATGCCTGGCTAATTTTTGTATTT 958
Query 157 TTGGTCGAGACGGGGTTTTGCCATGTTAGTCAGGCTGGTCTTGAACTCCTGACCTCAAGTGATCCACCAC--CT 228
||.||.||||||||||||...||||||.|.|||||.|||||..|||||||||||| .|||||||||| | ||
Sbjct 959 TTAGTAGAGACGGGGTTTCAGCATGTTGGCCAGGCCGGTCTCAAACTCCTGACCT--TGTGATCCACC-CGTCT 1029
Query 229 CGGCCTCCCAAAGTGTTGAGA----------------------------------------------------- 249
|||||||||||||||.||.||
Sbjct 1030 CGGCCTCCCAAAGTGCTGGGATTATAGGCGTGAGCCACCACTTCTGGCCACAAATTTCTTTTTGAAGGCTTATT 1103
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1104 CCAGTTTTGTGAGGCTAGCATGAGGTGTATGCATTTGCCAGGGGCAAATTTATACTGCTGAATTAACCCATGCA 1177
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1178 ACAAATGCTGCACATCTGCTCGCAGTCCATTTAGAGGCATTTGCGGTAGACAATGGAGGGGCCAGACTCATCAT 1251
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1252 ACATACCTGATGGCTAACCCACATGCTTGCAGTCCATTTAGAGGCATTTGCAGTGGATGATGGAGGGGCCACAT 1325
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1326 ACCTAATTGCTAATCCACATCTGCTGGAAGGTGGACAGTGAGGCCAGGATGGAACCACCAATCCACACCGAGTA 1399
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1400 CTTGTGCTCTGGGGGCATGATGAACTTGATCTTCATGGTGCTGGATGCCAGCGTGGTGATGCCAGGGCACATGG 1473
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1474 TGGTGCTGCTGGACAGCACTGTGTTGGCGTACAGGTCTTTGCGGATGTCCACGTCACACTTCATGATGGAGTTG 1547
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1548 AAGGTGGTCTTGTGGATGCCGCAGGATTCCATGCCCAAGAAGGAAGGCTGGAACAGCACCTGCAGACACCAGAA 1621
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1622 CCACTTGTTGCCGATGGTGATGACCTGACCTGGCCATCAGGCAGCTCATAGCTCTTCTCCAGGGAGGAGGAGGA 1695
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1696 TGTGGCAGTGGCCATCTCCTGCTCGAAGTCCAGGGCGATGTAGCACACCTTCTCGTTGATGTCGCGCACAATCT 1769
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1770 CCTGCTTGGCCGTGATGGTGAAGCTTGGTGAGGATCTTCATGAGGTAGTTGGTCAGGTCCTGGCCAGCCAGGTC 1843
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1844 CAGACGCAGGATGGCGTGGTGGGAGGGCATGGCCCTCGTAGATGGGTACCATGTAGGTGGCCCTGTCTCCAGAG 1917
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1918 TCCATGACAGTGCCAGTGATGCGCCCAGAGGCTTAGAGGGACAACACGGCCTGGATGGCCACATACATGGCTGG 1991
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1992 GGTGTTGAAGGTCTCAAACATGATCTGAGTCATCTTTTCTCTGTTGGCCTTGGGGTTCGAGGGGCCTCGGCCAA 2065
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2066 CAGCACCGGGTGCTTCTCTGGGGTCATGCACAGCTCGTTGTAGAAGGTGTGGTGCCAGATCTTCTCCATGTCAT 2139
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2140 CCCAGATGGTGATGATGCCATGCTCGATAGGGTACTTCAGGGTCAGGATGTCGTGCTTGCTCTGGGCCTCATGG 2213
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2214 CCCATGTAGGAGTCCTTCTGGCCCATGCCCACCATCACACCCTGGTGCCGGGGTCACCTGATGATGGAGGGGAA 2287
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2288 CACAGCTCAGGGGCCATCCATCCCCAGCAAAGCCAGCTTTGCACATGCCAGAGCCATTGTCAATGATGAGCGCG 2361
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2362 GCGATCTCTATTTCCATTGCAACCTGTGGAAGAGCAGGGCGGTGGAGCCATGGGAAGACACGGTGTGGGGGCTG 2435
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2436 GTGGCAGCAAGTGACTGTATTACTGGATTTTGAAGTTAACAATTAGCCAAATACTGATTTTTGATGGAAATTTA 2509
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2510 TTCTTAATTATTTTCTTTTAGAAAAAAATAGGAAAACATATAACAATAGAATTACTTAATTAAATTGATTCCTT 2583
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2584 GGCTGGGTGGCTACGCCTGTAATCCTAGCACTTTATGAGGCCGAGGAGGGTGGATTAGTTGAGGCCAGGAGTTC 2657
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2658 GAGACCAGCTTGGGAAACATGGCGAAACCCCATTTCTACTAAAAATTCAAAAATCAGCCAAGCATGGTGGTGCG 2731
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2732 TGCCTGTAGTCCCAGCTACCCAGGAGGCTGAGGCATGAGAATTGCCTGAGCTTAGGAGGCAGAGATTGCAGTGA 2805
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2806 GCCGAGATTGTGCCACTGCACTCCAGCCTGGCAGTAGAACCAGACCCTGTCTCAAAAACAAAAAATCTGTCTAG 2879
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2880 GCTGGGCATGGTGGCTCACGCTTGTAATCCCAGCACTTTGGGAGGCTGAGGCAAGTGGATCACCAGAGGTCAGG 2953
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2954 AGTTTGAGACCAACCTGGCCAACATGGTGAAACCCCGTCTCTCCTAAAAATACAAAAATTAGCCGGGCATGGTG 3027
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3028 GTACATGCCTATAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAGTGGCTTGAACCTGAGAGGCGGAGGTCGC 3101
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3102 AGTCAGCTTAGATTGCACCACTGTAAAGAAAAGAAAAAAAAAAGTCCATACATGAGTGTAGGGAATACTTTGTG 3175
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3176 AATTTTTAGACTTTTTATTAACCACCAGAGAATATTTACTACACCTGGGTGTTTTTTAAAGAATACTGTTCTTA 3249
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3250 TTCTGAAATAAGTAGACCGTTTTGCATATGATCAGCCAGTGTCCCTTACACAATTTATTTCATGTAATTTTCAT 3323
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3324 CTTTCCCATGTAAATCTCAGTTCAGCCACTTAGTGGATCCAAGTCTCCAGGCAGCTGCCTTAGTCGTTCTGTGT 3397
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3398 CTCAAGTACTTTTAATCCATATTGTACAGTAAGGTGAATTTATAGATTTCAAGATCTATAAATTCTATAGATCT 3471
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3472 ATAGGTGAATTTGGGGTGGAGCCAAGATGGCCGAATAGGAACAGCTCCAGTCTGCAGCTCCCAGCATGAGCGAT 3545
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3546 GCAGAAGACGGGTGATTTCTGAACTTCCAACTGAGGTACCAGGTTCATCTCACTGGGGAGTGTCTGACAGTGGG 3619
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3620 TGCAGGACAGTGGGTACAGTGCACTGAGCGTGAGCCAAAGCAGGGCGAGGCATTGCCTCACTCGGGAAGCACAA 3693
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3694 GGGGTCAGGGAATTCCCTTTCCTAGTCAAAGAAAGGGGTGACAGATGGCATCTGGAAAATCGGGTCACTCCCAC 3767
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3768 CCTAATACTGCGCTTTTCCAACAGTCTTAGCAAATAGCTCACCAGGAGATTATATCCCGCCCCTGGCTCGGAGG 3841
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3842 GTCCTACGCCCACAGATTCTCGCTCATTGCTAGCACAGCAGTCTGAGCTCAAACTGCAAGGTGGCAGCGAGGCT 3915
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3916 GGGGGAGGGGCACCCGCCATTGCTGAGGCTTGAGTAGGTAAAGCGGCCCGGAAGCTCGAACTGGGTGGAGCCCA 3989
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3990 CTGCAGCTCAAGGAGGCCTGCCTGTCTCTGTAGACTCCACCTCTGGGGGCAGGGCATTGCCAAACAAAAGGCAG 4063
Query 250 -------------------------------------------------------------------------- 249
Sbjct 4064 CAGAATCCTCTGCAGACTTAAATGTCCCTGTCTGACAGCTTTGAAGAGAGTAGTGGTTCTCCCAGCACGCAGCT 4137
Query 250 -------------------------------------------------------------------------- 249
Sbjct 4138 GGAGATCTGAGAATGGACAGACTGCCTCCTCAAGTGGGTCCCTGACCCCCGAGTAGCCTAACTGGGAGGCACCC 4211
Query 250 -------------------------------------------------------------------------- 249
Sbjct 4212 CCCAGTAGGGGCAGACAGACACCTCACACGGCCGGGTACTTCTCTGAGACAAAACTTCCAGAGGAATGATCAGG 4285
Query 250 -------------------------------------------------------------------------- 249
Sbjct 4286 CAGCAACATTTGCTGTTCACCAATATCTGCTGTTCTGCAGCCTCTGCTGCTGATACCCAGGCAAACAGGGTCTG 4359
Query 250 -------------------------------------------------------------------------- 249
Sbjct 4360 GAGTGGACCTCCAGCAAACTCCAACATTCCTACAGCTGAGGGTCCTGATTGTTAGAAGGAAAACTAACAAACAG 4433
Query 250 -------------------------------------------------------------------------- 249
Sbjct 4434 AAAGGACATCCACACCAAAACCCCATCTGTATGTCACCATCATCAAAGACCAAAGGTAGATAAAACCACAAAGA 4507
Query 250 -------------------------------------------------------------------------- 249
Sbjct 4508 TGGGGAAAAAACAGAGCAGAAAAAACGGAAATTCTAAAAATCAGAGTGCCTATCCTCCTCCAAAGGAACACAGC 4581
Query 250 -------------------------------------------------------------------------- 249
Sbjct 4582 TCCTCACCAGCAATGGAACAAAGCTGGATGGAGAATGACGAGTTGAGAGAAGAAGGCTTCAGACAATCAAACTA 4655
Query 250 -------------------------------------------------------------------------- 249
Sbjct 4656 CTCCAAGCTAAAGGAGGAAGTTCGAACCAATGGCAAAGAAGTTAAAAACCTTGAAAAAAGATTAGACAAATCAC 4729
Query 250 -------------------------------------------------------------------------- 249
Sbjct 4730 TAACTAGAATAACCAATGCAGAGAAGTCCTTAAAGGACCTGATGGAGCTGAAAACCACAGCACAAGAACTATCT 4803
Query 250 -------------------------------------------------------------------------- 249
Sbjct 4804 GATGAATGCACAAGCCTCAGTAGCCGATTCGATCAACTGGAAGAAAGGGTATCAGTGATGGAAGATCAAATGAA 4877
Query 250 -------------------------------------------------------------------------- 249
Sbjct 4878 TGAAATGAAGCGAGAAGAGAAGTTTAGAGAAAAAAGAATAAAAAGAAACAAAGCCTCCAAGAAATATGGGACTA 4951
Query 250 -------------------------------------------------------------------------- 249
Sbjct 4952 TGTGAAAAGACCAAATCTACGTCTGATTGGTGTACCTGAAAGTGACGGGGAGAATGGAACCAAGTTGGAAAACA 5025
Query 250 -------------------------------------------------------------------------- 249
Sbjct 5026 CTCTGCAGGATATTATCCAGGAGAACTTCCCCAATCTAGCAAGGCAGGCCAACATTCAAACACCACAAAGGTAC 5099
Query 250 -------------------------------------------------------------------------- 249
Sbjct 5100 TCCTCGAGAAGAGCAACTCCAAGACACATAATTGTCAGATTCACCAAAGTTGAAATGAAGGAAAAGATGTTAAG 5173
Query 250 -------------------------------------------------------------------------- 249
Sbjct 5174 GGCAGCCAGAGAGAAAGGTCGGGTTACCCACAAAGGGAAGCCCATCAGACTAACAGCTGATCTCTTGGCAGAAA 5247
Query 250 -------------------------------------------------------------------------- 249
Sbjct 5248 CTCTACAAGCCAGAAGAGAGTGGGGGCCAACATTCAACATTCTTAAAAGAATTTTCAACCCAGAATTTCATATT 5321
Query 250 -------------------------------------------------------------------------- 249
Sbjct 5322 CAGCCAAACTAAGCTTCAGAAGTGAAGGAGAAATAAAATCCTTTACAGACAAGCAAATGCTGAGAGATTTTGTC 5395
Query 250 -------------------------------------------------------------------------- 249
Sbjct 5396 ACCACCAAGCCTGCCCTAAAAGAGCTCCTGAAGGAAGCACTAAACATGGAAAGGAACAACTGGTACCAGCCACT 5469
Query 250 -------------------------------------------------------------------------- 249
Sbjct 5470 GCAAAAACATGCCAAATTGTAAAGACCATTGAGGCTAGGAAGAACCTGCATCAACCAACGAGCAAAATAACCAG 5543
Query 250 -------------------------------------------------------------------------- 249
Sbjct 5544 CTAACATCATAATGACAGGATCGAATTCACACATAACAATACTAACCTTAAATGTAACTGGGCTAAATGCTCCA 5617
Query 250 -------------------------------------------------------------------------- 249
Sbjct 5618 ATTAAAAGACACAGACTGGCAAATTGGATAAAGAGTCAAGACCCATCAGTGTGCTGTATTCAGGAAACCCATCT 5691
Query 250 -------------------------------------------------------------------------- 249
Sbjct 5692 CACCTGCAGAGACACACATAGGCTCAAAATAAAGGGATGGAGGAAGACCTACGAAGCAAATGGAAAACAAAAAA 5765
Query 250 -------------------------------------------------------------------------- 249
Sbjct 5766 AGGCAGGGGTTGCAATCCTAGTCTCATATAAAACAGACTTTAAACGAACAAAGATCAAAGGAGACAAAGAAGGC 5839
Query 250 -------------------------------------------------------------------------- 249
Sbjct 5840 CATTACATAATGGTGAAGGGATCAGTTCAACAAGAAGAGCTAACTATCCTAAATATATATGCACCCAATACAAG 5913
Query 250 -------------------------------------------------------------------------- 249
Sbjct 5914 AGCACCTAGATTCATAAAGCAAGTCCTTAGAGACCTACAAAGAGACTTAGACTCCCACACAATAATAATGGGAG 5987
Query 250 -------------------------------------------------------------------------- 249
Sbjct 5988 ACTTTAACACCCCACTGTCAACATTAGACAGATCAACGAGACAGAAGTTAACAAGGATATCCAGGAATTGAACT 6061
Query 250 -------------------------------------------------------------------------- 249
Sbjct 6062 CAGCTCTGCACCAAGTGTACCTAATAGACATCTACAGAACTCTCCACCCCAAATCAACAGAATATACATTCTTT 6135
Query 250 -------------------------------------------------------------------------- 249
Sbjct 6136 TCAGCACCACACCACACCTATTCCAAAATTGACCACATAGTTGGAAGTAAAGCACTCCTCAGCAAATGTAAAAG 6209
Query 250 -------------------------------------------------------------------------- 249
Sbjct 6210 AACAGAAATTATAACAAACTGTCTCTCAGACCACAGTGCAATCAAACTAGAACTCAGGATTAAGAAACTCACTC 6283
Query 250 -------------------------------------------------------------------------- 249
Sbjct 6284 AAAACCGCTCAACTACATGGAAACTGAACAACTGGCTCCTGAAAGACTACTGGGTACATAACGAAATGAAGGCA 6357
Query 250 -------------------------------------------------------------------------- 249
Sbjct 6358 GAAATAAAGATGTTCTTTGAAACCAACGAGAACAAAGACATAACATACCAGAATCTCTGGGACACATTCAAAGC 6431
Query 250 ------------------------------------------ 249
Sbjct 6432 AGTGTGTAGAGGGAAATTTATAGCACTAAATGCCCACAAGAG 6473