Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_10792
- Subject:
- NR_145974.1
- Aligned Length:
- 6433
- Identities:
- 216
- Gaps:
- 6191
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 CCGTGCCCCTGCTCGCGCTGCAGCCCGTGGAAGGGTTCCGTCCAGCGTATCCTTCAGATCTTGCTGTAGGCCTC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TGGTGTCTGTGCGCGCGCGGCAGGGGCGGCGGCGGCGACGGCCGGAGGTGTACGTTGCTTCCTCTACTGAAGTC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TTGAAACCCCTGAAAGTCATCCCTGAGGTTTGAAGTTAACTTCTTCTACACCCTGTTAATGTTGATATTTTGAC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CTCCTTCCATGAATCACAAATGTTCTTAATGGCATCTAGAATGGTGTAAATCCAAACCGCTTCCAACTCAAGGC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 AAGTAACAGCCCACGGTGTTCTGGCAGGAAAACATCAGCTAAGAAAGGAAACTGGGTCCTATGGCTTGGACTTT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CCAACTCTGACAGACCGGCAGGACAGAAACAACTGGTTCAGGAGCCCTTGCCAGCCTCTAGAGAAATCCCAGAA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CACTCAGCCCTGATGACACATTAATACCCTGCACATATTGGAGACTGCTGACCACGCATACTCACCAAGCCACA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GACTTGTCTTCCACAAGCACGTTCTTACCTCAGCCACAAAGTGCCCAAGCCACATGTACTAAAGGTTGAAATCA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GAGACATGTACAGGGTATTAAACAGATACCAAGGGGAACAGTTAACTTGAATATAGCTTGAATAGAAAGTCAAA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 ATCAGCAACAAGTCTACAATCCAGTGCTGATATCAGATACAAGCTTCAAGGACAACTTTCTGTGTATGTTTTTT 740
Query 1 --------------ATGGAGTCTCGCTCTGTTGCCCAGGCTGGAGTGCAGTGGCCTG--ATCTCGGCTCACTGC 58
|.|.||||||||.|||||||||||||||||||||||||| || ||||||||||||..|
Sbjct 741 TTTTTTTTTTTGAGACGTAGTCTCGCCCTGTTGCCCAGGCTGGAGTGCAGTGG--TGCAATCTCGGCTCACCAC 812
Query 59 AACCTCTGCCTCCCAGGTTCAAGCGATTCTTCTGCCTCAGCCTCCAGAGTAGCTGGGACTATAGAC--ATGCAC 130
|||||||||||||||||||||||.||||||.||||||||||||||..|||||||||||.|||||.| ||| |
Sbjct 813 AACCTCTGCCTCCCAGGTTCAAGTGATTCTCCTGCCTCAGCCTCCCCAGTAGCTGGGATTATAGGCGAATG--C 884
Query 131 CACCACGCCCGGCTAA-TTTTGTATTTTTGGTCGAGACGGGGTTTTGCCATGTTAGTCAGGCTGGTCTTGAACT 203
|||||.|||.|||||| ||||||||||||.||.||||||||||||...||||||.|.|||||.|||||..||||
Sbjct 885 CACCATGCCTGGCTAATTTTTGTATTTTTAGTAGAGACGGGGTTTCAGCATGTTGGCCAGGCCGGTCTCAAACT 958
Query 204 CCTGACCTCAAGTGATCCACCAC--CTCGGCCTCCCAAAGTGTTGAGA-------------------------- 249
|||||||| .|||||||||| | |||||||||||||||||.||.||
Sbjct 959 CCTGACCT--TGTGATCCACC-CGTCTCGGCCTCCCAAAGTGCTGGGATTATAGGCGTGAGCCACCACTTCTGG 1029
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1030 CCACAAATTTCTTTTTGAAGGCTTATTCCAGTTTTGTGAGGCTAGCATGAGGTGTATGCATTTGCCAGGGGCAA 1103
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1104 ATTTATACTGCTGAATTAACCCATGCAACAAATGCTGCACATCTGCTCGCAGTCCATTTAGAGGCATTTGCGGT 1177
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1178 AGACAATGGAGGGGCCAGACTCATCATACATACCTGATGGCTAACCCACATGCTTGCAGTCCATTTAGAGGCAT 1251
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1252 TTGCAGTGGATGATGGAGGGGCCACATACCTAATTGCTAATCCACATCTGCTGGAAGGTGGACAGTGAGGCCAG 1325
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1326 GATGGAACCACCAATCCACACCGAGTACTTGTGCTCTGGGGGCATGATGAACTTGATCTTCATGGTGCTGGATG 1399
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1400 CCAGCGTGGTGATGCCAGGGCACATGGTGGTGCTGCTGGACAGCACTGTGTTGGCGTACAGGTCTTTGCGGATG 1473
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1474 TCCACGTCACACTTCATGATGGAGTTGAAGGTGGTCTTGTGGATGCCGCAGGATTCCATGCCCAAGAAGGAAGG 1547
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1548 CTGGAACAGCACCTGCAGACACCAGAACCACTTGTTGCCGATGGTGATGACCTGACCTGGCCATCAGGCAGCTC 1621
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1622 ATAGCTCTTCTCCAGGGAGGAGGAGGATGTGGCAGTGGCCATCTCCTGCTCGAAGTCCAGGGCGATGTAGCACA 1695
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1696 CCTTCTCGTTGATGTCGCGCACAATCTCCTGCTTGGCCGTGATGGTGAAGCTTGGTGAGGATCTTCATGAGGTA 1769
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1770 GTTGGTCAGGTCCTGGCCAGCCAGGTCCAGACGCAGGATGGCGTGGTGGGAGGGCATGGCCCTCGTAGATGGGT 1843
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1844 ACCATGTAGGTGGCCCTGTCTCCAGAGTCCATGACAGTGCCAGTGATGCGCCCAGAGGCTTAGAGGGACAACAC 1917
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1918 GGCCTGGATGGCCACATACATGGCTGGGGTGTTGAAGGTCTCAAACATGATCTGAGTCATCTTTTCTCTGTTGG 1991
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1992 CCTTGGGGTTCGAGGGGCCTCGGCCAACAGCACCGGGTGCTTCTCTGGGGTCATGCACAGCTCGTTGTAGAAGG 2065
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2066 TGTGGTGCCAGATCTTCTCCATGTCATCCCAGATGGTGATGATGCCATGCTCGATAGGGTACTTCAGGGTCAGG 2139
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2140 ATGTCGTGCTTGCTCTGGGCCTCATGGCCCATGTAGGAGTCCTTCTGGCCCATGCCCACCATCACACCCTGGTG 2213
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2214 CCGGGGTCACCTGATGATGGAGGGGAACACAGCTCAGGGGCCATCCATCCCCAGCAAAGCCAGCTTTGCACATG 2287
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2288 CCAGAGCCATTGTCAATGATGAGCGCGGCGATCTCTATTTCCATTGCAACCTGTGGAAGAGCAGGGCGGTGGAG 2361
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2362 CCATGGGAAGACACGGTGTGGGGGCTGGTGGCAGCAAGTGACTGTATTACTGGATTTTGAAGTTAACAATTAGC 2435
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2436 CAAATACTGATTTTTGATGGAAATTTATTCTTAATTATTTTCTTTTAGAAAAAAATAGGAAAACATATAACAAT 2509
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2510 AGAATTACTTAATTAAATTGATTCCTTGGCTGGGTGGCTACGCCTGTAATCCTAGCACTTTATGAGGCCGAGGA 2583
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2584 GGGTGGATTAGTTGAGGCCAGGAGTTCGAGACCAGCTTGGGAAACATGGCGAAACCCCATTTCTACTAAAAATT 2657
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2658 CAAAAATCAGCCAAGCATGGTGGTGCGTGCCTGTAGTCCCAGCTACCCAGGAGGCTGAGGCATGAGAATTGCCT 2731
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2732 GAGCTTAGGAGGCAGAGATTGCAGTGAGCCGAGATTGTGCCACTGCACTCCAGCCTGGCAGTAGAACCAGACCC 2805
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2806 TGTCTCAAAAACAAAAAATCTGTCTAGGCTGGGCATGGTGGCTCACGCTTGTAATCCCAGCACTTTGGGAGGCT 2879
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2880 GAGGCAAGTGGATCACCAGAGGTCAGGAGTTTGAGACCAACCTGGCCAACATGGTGAAACCCCGTCTCTCCTAA 2953
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2954 AAATACAAAAATTAGCCGGGCATGGTGGTACATGCCTATAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAGT 3027
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3028 GGCTTGAACCTGAGAGGCGGAGGTCGCAGTCAGCTTAGATTGCACCACTGTAAAGAAAAGAAAAAAAAAAGTCC 3101
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3102 ATACATGAGTGTAGGGAATACTTTGTGAATTTTTAGACTTTTTATTAACCACCAGAGAATATTTACTACACCTG 3175
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3176 GGTGTTTTTTAAAGAATACTGTTCTTATTCTGAAATAAGTAGACCGTTTTGCATATGATCAGCCAGTGTCCCTT 3249
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3250 ACACAATTTATTTCATGTAATTTTCATCTTTCCCATGTAAATCTCAGTTCAGCCACTTAGTGGATCCAAGTCTC 3323
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3324 CAGGCAGCTGCCTTAGTCGTTCTGTGTCTCAAGTACTTTTAATCCATATTGTACAGTAAGGTGAATTTATAGAT 3397
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3398 TTCAAGATCTATAAATTCTATAGATCTATAGGTGAATTTGGGGTGGAGCCAAGATGGCCGAATAGGAACAGCTC 3471
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3472 CAGTCTGCAGCTCCCAGCATGAGCGATGCAGAAGACGGGTGATTTCTGAACTTCCAACTGAGGTACCAGGTTCA 3545
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3546 TCTCACTGGGGAGTGTCTGACAGTGGGTGCAGGACAGTGGGTACAGTGCACTGAGCGTGAGCCAAAGCAGGGCG 3619
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3620 AGGCATTGCCTCACTCGGGAAGCACAAGGGGTCAGGGAATTCCCTTTCCTAGTCAAAGAAAGGGGTGACAGATG 3693
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3694 GCATCTGGAAAATCGGGTCACTCCCACCCTAATACTGCGCTTTTCCAACAGTCTTAGCAAATAGCTCACCAGGA 3767
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3768 GATTATATCCCGCCCCTGGCTCGGAGGGTCCTACGCCCACAGATTCTCGCTCATTGCTAGCACAGCAGTCTGAG 3841
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3842 CTCAAACTGCAAGGTGGCAGCGAGGCTGGGGGAGGGGCACCCGCCATTGCTGAGGCTTGAGTAGGTAAAGCGGC 3915
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3916 CCGGAAGCTCGAACTGGGTGGAGCCCACTGCAGCTCAAGGAGGCCTGCCTGTCTCTGTAGACTCCACCTCTGGG 3989
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3990 GGCAGGGCATTGCCAAACAAAAGGCAGCAGAATCCTCTGCAGACTTAAATGTCCCTGTCTGACAGCTTTGAAGA 4063
Query 250 -------------------------------------------------------------------------- 249
Sbjct 4064 GAGTAGTGGTTCTCCCAGCACGCAGCTGGAGATCTGAGAATGGACAGACTGCCTCCTCAAGTGGGTCCCTGACC 4137
Query 250 -------------------------------------------------------------------------- 249
Sbjct 4138 CCCGAGTAGCCTAACTGGGAGGCACCCCCCAGTAGGGGCAGACAGACACCTCACACGGCCGGGTACTTCTCTGA 4211
Query 250 -------------------------------------------------------------------------- 249
Sbjct 4212 GACAAAACTTCCAGAGGAATGATCAGGCAGCAACATTTGCTGTTCACCAATATCTGCTGTTCTGCAGCCTCTGC 4285
Query 250 -------------------------------------------------------------------------- 249
Sbjct 4286 TGCTGATACCCAGGCAAACAGGGTCTGGAGTGGACCTCCAGCAAACTCCAACATTCCTACAGCTGAGGGTCCTG 4359
Query 250 -------------------------------------------------------------------------- 249
Sbjct 4360 ATTGTTAGAAGGAAAACTAACAAACAGAAAGGACATCCACACCAAAACCCCATCTGTATGTCACCATCATCAAA 4433
Query 250 -------------------------------------------------------------------------- 249
Sbjct 4434 GACCAAAGGTAGATAAAACCACAAAGATGGGGAAAAAACAGAGCAGAAAAAACGGAAATTCTAAAAATCAGAGT 4507
Query 250 -------------------------------------------------------------------------- 249
Sbjct 4508 GCCTATCCTCCTCCAAAGGAACACAGCTCCTCACCAGCAATGGAACAAAGCTGGATGGAGAATGACGAGTTGAG 4581
Query 250 -------------------------------------------------------------------------- 249
Sbjct 4582 AGAAGAAGGCTTCAGACAATCAAACTACTCCAAGCTAAAGGAGGAAGTTCGAACCAATGGCAAAGAAGTTAAAA 4655
Query 250 -------------------------------------------------------------------------- 249
Sbjct 4656 ACCTTGAAAAAAGATTAGACAAATCACTAACTAGAATAACCAATGCAGAGAAGTCCTTAAAGGACCTGATGGAG 4729
Query 250 -------------------------------------------------------------------------- 249
Sbjct 4730 CTGAAAACCACAGCACAAGAACTATCTGATGAATGCACAAGCCTCAGTAGCCGATTCGATCAACTGGAAGAAAG 4803
Query 250 -------------------------------------------------------------------------- 249
Sbjct 4804 GGTATCAGTGATGGAAGATCAAATGAATGAAATGAAGCGAGAAGAGAAGTTTAGAGAAAAAAGAATAAAAAGAA 4877
Query 250 -------------------------------------------------------------------------- 249
Sbjct 4878 ACAAAGCCTCCAAGAAATATGGGACTATGTGAAAAGACCAAATCTACGTCTGATTGGTGTACCTGAAAGTGACG 4951
Query 250 -------------------------------------------------------------------------- 249
Sbjct 4952 GGGAGAATGGAACCAAGTTGGAAAACACTCTGCAGGATATTATCCAGGAGAACTTCCCCAATCTAGCAAGGCAG 5025
Query 250 -------------------------------------------------------------------------- 249
Sbjct 5026 GCCAACATTCAAACACCACAAAGGTACTCCTCGAGAAGAGCAACTCCAAGACACATAATTGTCAGATTCACCAA 5099
Query 250 -------------------------------------------------------------------------- 249
Sbjct 5100 AGTTGAAATGAAGGAAAAGATGTTAAGGGCAGCCAGAGAGAAAGGTCGGGTTACCCACAAAGGGAAGCCCATCA 5173
Query 250 -------------------------------------------------------------------------- 249
Sbjct 5174 GACTAACAGCTGATCTCTTGGCAGAAACTCTACAAGCCAGAAGAGAGTGGGGGCCAACATTCAACATTCTTAAA 5247
Query 250 -------------------------------------------------------------------------- 249
Sbjct 5248 AGAATTTTCAACCCAGAATTTCATATTCAGCCAAACTAAGCTTCAGAAGTGAAGGAGAAATAAAATCCTTTACA 5321
Query 250 -------------------------------------------------------------------------- 249
Sbjct 5322 GACAAGCAAATGCTGAGAGATTTTGTCACCACCAAGCCTGCCCTAAAAGAGCTCCTGAAGGAAGCACTAAACAT 5395
Query 250 -------------------------------------------------------------------------- 249
Sbjct 5396 GGAAAGGAACAACTGGTACCAGCCACTGCAAAAACATGCCAAATTGTAAAGACCATTGAGGCTAGGAAGAACCT 5469
Query 250 -------------------------------------------------------------------------- 249
Sbjct 5470 GCATCAACCAACGAGCAAAATAACCAGCTAACATCATAATGACAGGATCGAATTCACACATAACAATACTAACC 5543
Query 250 -------------------------------------------------------------------------- 249
Sbjct 5544 TTAAATGTAACTGGGCTAAATGCTCCAATTAAAAGACACAGACTGGCAAATTGGATAAAGAGTCAAGACCCATC 5617
Query 250 -------------------------------------------------------------------------- 249
Sbjct 5618 AGTGTGCTGTATTCAGGAAACCCATCTCACCTGCAGAGACACACATAGGCTCAAAATAAAGGGATGGAGGAAGA 5691
Query 250 -------------------------------------------------------------------------- 249
Sbjct 5692 CCTACGAAGCAAATGGAAAACAAAAAAAGGCAGGGGTTGCAATCCTAGTCTCATATAAAACAGACTTTAAACGA 5765
Query 250 -------------------------------------------------------------------------- 249
Sbjct 5766 ACAAAGATCAAAGGAGACAAAGAAGGCCATTACATAATGGTGAAGGGATCAGTTCAACAAGAAGAGCTAACTAT 5839
Query 250 -------------------------------------------------------------------------- 249
Sbjct 5840 CCTAAATATATATGCACCCAATACAAGAGCACCTAGATTCATAAAGCAAGTCCTTAGAGACCTACAAAGAGACT 5913
Query 250 -------------------------------------------------------------------------- 249
Sbjct 5914 TAGACTCCCACACAATAATAATGGGAGACTTTAACACCCCACTGTCAACATTAGACAGATCAACGAGACAGAAG 5987
Query 250 -------------------------------------------------------------------------- 249
Sbjct 5988 TTAACAAGGATATCCAGGAATTGAACTCAGCTCTGCACCAAGTGTACCTAATAGACATCTACAGAACTCTCCAC 6061
Query 250 -------------------------------------------------------------------------- 249
Sbjct 6062 CCCAAATCAACAGAATATACATTCTTTTCAGCACCACACCACACCTATTCCAAAATTGACCACATAGTTGGAAG 6135
Query 250 -------------------------------------------------------------------------- 249
Sbjct 6136 TAAAGCACTCCTCAGCAAATGTAAAAGAACAGAAATTATAACAAACTGTCTCTCAGACCACAGTGCAATCAAAC 6209
Query 250 -------------------------------------------------------------------------- 249
Sbjct 6210 TAGAACTCAGGATTAAGAAACTCACTCAAAACCGCTCAACTACATGGAAACTGAACAACTGGCTCCTGAAAGAC 6283
Query 250 -------------------------------------------------------------------------- 249
Sbjct 6284 TACTGGGTACATAACGAAATGAAGGCAGAAATAAAGATGTTCTTTGAAACCAACGAGAACAAAGACATAACATA 6357
Query 250 --------------------------------------------------------------------- 249
Sbjct 6358 CCAGAATCTCTGGGACACATTCAAAGCAGTGTGTAGAGGGAAATTTATAGCACTAAATGCCCACAAGAG 6426