Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_10792
- Subject:
- NR_145975.1
- Aligned Length:
- 6296
- Identities:
- 216
- Gaps:
- 6054
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 CCGTGCCCCTGCTCGCGCTGCAGCCCGTGGAAGGGTTCCGTCCAGCGTATCCTTCAGATCTTGCTGTAGGCCTC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TGGTGTCTGTGCGCGCGCGGCAGGGGCGGCGGCGGCGACGGCCGGAGGTGTACGGTGTAAATCCAAACCGCTTC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CAACTCAAGGCAAGTAACAGCCCACGGTGTTCTGGCAGGAAAACATCAGCTAAGAAAGGAAACTGGGTCCTATG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GCTTGGACTTTCCAACTCTGACAGACCGGCAGGACAGAAACAACTGGTTCAGGAGCCCTTGCCAGCCTCTAGAG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 AAATCCCAGAACACTCAGCCCTGATGACACATTAATACCCTGCACATATTGGAGACTGCTGACCACGCATACTC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 ACCAAGCCACAGACTTGTCTTCCACAAGCACGTTCTTACCTCAGCCACAAAGTGCCCAAGCCACATGTACTAAA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GGTTGAAATCAGAGACATGTACAGGGTATTAAACAGATACCAAGGGGAACAGTTAACTTGAATATAGCTTGAAT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 AGAAAGTCAAAATCAGCAACAAGTCTACAATCCAGTGCTGATATCAGATACAAGCTTCAAGGACAACTTTCTGT 592
Query 1 -------------------------ATGGAGTCTCGCTCTGTTGCCCAGGCTGGAGTGCAGTGGCCTG--ATCT 47
|.|.||||||||.|||||||||||||||||||||||||| || ||||
Sbjct 593 GTATGTTTTTTTTTTTTTTTTTGAGACGTAGTCTCGCCCTGTTGCCCAGGCTGGAGTGCAGTGG--TGCAATCT 664
Query 48 CGGCTCACTGCAACCTCTGCCTCCCAGGTTCAAGCGATTCTTCTGCCTCAGCCTCCAGAGTAGCTGGGACTATA 121
||||||||..||||||||||||||||||||||||.||||||.||||||||||||||..|||||||||||.||||
Sbjct 665 CGGCTCACCACAACCTCTGCCTCCCAGGTTCAAGTGATTCTCCTGCCTCAGCCTCCCCAGTAGCTGGGATTATA 738
Query 122 GAC--ATGCACCACCACGCCCGGCTAA-TTTTGTATTTTTGGTCGAGACGGGGTTTTGCCATGTTAGTCAGGCT 192
|.| ||| ||||||.|||.|||||| ||||||||||||.||.||||||||||||...||||||.|.|||||.
Sbjct 739 GGCGAATG--CCACCATGCCTGGCTAATTTTTGTATTTTTAGTAGAGACGGGGTTTCAGCATGTTGGCCAGGCC 810
Query 193 GGTCTTGAACTCCTGACCTCAAGTGATCCACCAC--CTCGGCCTCCCAAAGTGTTGAGA--------------- 249
|||||..|||||||||||| .|||||||||| | |||||||||||||||||.||.||
Sbjct 811 GGTCTCAAACTCCTGACCT--TGTGATCCACC-CGTCTCGGCCTCCCAAAGTGCTGGGATTATAGGCGTGAGCC 881
Query 250 -------------------------------------------------------------------------- 249
Sbjct 882 ACCACTTCTGGCCACAAATTTCTTTTTGAAGGCTTATTCCAGTTTTGTGAGGCTAGCATGAGGTGTATGCATTT 955
Query 250 -------------------------------------------------------------------------- 249
Sbjct 956 GCCAGGGGCAAATTTATACTGCTGAATTAACCCATGCAACAAATGCTGCACATCTGCTCGCAGTCCATTTAGAG 1029
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1030 GCATTTGCGGTAGACAATGGAGGGGCCAGACTCATCATACATACCTGATGGCTAACCCACATGCTTGCAGTCCA 1103
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1104 TTTAGAGGCATTTGCAGTGGATGATGGAGGGGCCACATACCTAATTGCTAATCCACATCTGCTGGAAGGTGGAC 1177
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1178 AGTGAGGCCAGGATGGAACCACCAATCCACACCGAGTACTTGTGCTCTGGGGGCATGATGAACTTGATCTTCAT 1251
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1252 GGTGCTGGATGCCAGCGTGGTGATGCCAGGGCACATGGTGGTGCTGCTGGACAGCACTGTGTTGGCGTACAGGT 1325
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1326 CTTTGCGGATGTCCACGTCACACTTCATGATGGAGTTGAAGGTGGTCTTGTGGATGCCGCAGGATTCCATGCCC 1399
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1400 AAGAAGGAAGGCTGGAACAGCACCTGCAGACACCAGAACCACTTGTTGCCGATGGTGATGACCTGACCTGGCCA 1473
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1474 TCAGGCAGCTCATAGCTCTTCTCCAGGGAGGAGGAGGATGTGGCAGTGGCCATCTCCTGCTCGAAGTCCAGGGC 1547
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1548 GATGTAGCACACCTTCTCGTTGATGTCGCGCACAATCTCCTGCTTGGCCGTGATGGTGAAGCTTGGTGAGGATC 1621
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1622 TTCATGAGGTAGTTGGTCAGGTCCTGGCCAGCCAGGTCCAGACGCAGGATGGCGTGGTGGGAGGGCATGGCCCT 1695
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1696 CGTAGATGGGTACCATGTAGGTGGCCCTGTCTCCAGAGTCCATGACAGTGCCAGTGATGCGCCCAGAGGCTTAG 1769
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1770 AGGGACAACACGGCCTGGATGGCCACATACATGGCTGGGGTGTTGAAGGTCTCAAACATGATCTGAGTCATCTT 1843
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1844 TTCTCTGTTGGCCTTGGGGTTCGAGGGGCCTCGGCCAACAGCACCGGGTGCTTCTCTGGGGTCATGCACAGCTC 1917
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1918 GTTGTAGAAGGTGTGGTGCCAGATCTTCTCCATGTCATCCCAGATGGTGATGATGCCATGCTCGATAGGGTACT 1991
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1992 TCAGGGTCAGGATGTCGTGCTTGCTCTGGGCCTCATGGCCCATGTAGGAGTCCTTCTGGCCCATGCCCACCATC 2065
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2066 ACACCCTGGTGCCGGGGTCACCTGATGATGGAGGGGAACACAGCTCAGGGGCCATCCATCCCCAGCAAAGCCAG 2139
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2140 CTTTGCACATGCCAGAGCCATTGTCAATGATGAGCGCGGCGATCTCTATTTCCATTGCAACCTGTGGAAGAGCA 2213
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2214 GGGCGGTGGAGCCATGGGAAGACACGGTGTGGGGGCTGGTGGCAGCAAGTGACTGTATTACTGGATTTTGAAGT 2287
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2288 TAACAATTAGCCAAATACTGATTTTTGATGGAAATTTATTCTTAATTATTTTCTTTTAGAAAAAAATAGGAAAA 2361
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2362 CATATAACAATAGAATTACTTAATTAAATTGATTCCTTGGCTGGGTGGCTACGCCTGTAATCCTAGCACTTTAT 2435
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2436 GAGGCCGAGGAGGGTGGATTAGTTGAGGCCAGGAGTTCGAGACCAGCTTGGGAAACATGGCGAAACCCCATTTC 2509
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2510 TACTAAAAATTCAAAAATCAGCCAAGCATGGTGGTGCGTGCCTGTAGTCCCAGCTACCCAGGAGGCTGAGGCAT 2583
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2584 GAGAATTGCCTGAGCTTAGGAGGCAGAGATTGCAGTGAGCCGAGATTGTGCCACTGCACTCCAGCCTGGCAGTA 2657
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2658 GAACCAGACCCTGTCTCAAAAACAAAAAATCTGTCTAGGCTGGGCATGGTGGCTCACGCTTGTAATCCCAGCAC 2731
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2732 TTTGGGAGGCTGAGGCAAGTGGATCACCAGAGGTCAGGAGTTTGAGACCAACCTGGCCAACATGGTGAAACCCC 2805
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2806 GTCTCTCCTAAAAATACAAAAATTAGCCGGGCATGGTGGTACATGCCTATAATCCCAGCTACTTGGGAGGCTGA 2879
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2880 GGCAGGAGAGTGGCTTGAACCTGAGAGGCGGAGGTCGCAGTCAGCTTAGATTGCACCACTGTAAAGAAAAGAAA 2953
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2954 AAAAAAAGTCCATACATGAGTGTAGGGAATACTTTGTGAATTTTTAGACTTTTTATTAACCACCAGAGAATATT 3027
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3028 TACTACACCTGGGTGTTTTTTAAAGAATACTGTTCTTATTCTGAAATAAGTAGACCGTTTTGCATATGATCAGC 3101
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3102 CAGTGTCCCTTACACAATTTATTTCATGTAATTTTCATCTTTCCCATGTAAATCTCAGTTCAGCCACTTAGTGG 3175
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3176 ATCCAAGTCTCCAGGCAGCTGCCTTAGTCGTTCTGTGTCTCAAGTACTTTTAATCCATATTGTACAGTAAGGTG 3249
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3250 AATTTATAGATTTCAAGATCTATAAATTCTATAGATCTATAGGTGAATTTGGGGTGGAGCCAAGATGGCCGAAT 3323
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3324 AGGAACAGCTCCAGTCTGCAGCTCCCAGCATGAGCGATGCAGAAGACGGGTGATTTCTGAACTTCCAACTGAGG 3397
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3398 TACCAGGTTCATCTCACTGGGGAGTGTCTGACAGTGGGTGCAGGACAGTGGGTACAGTGCACTGAGCGTGAGCC 3471
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3472 AAAGCAGGGCGAGGCATTGCCTCACTCGGGAAGCACAAGGGGTCAGGGAATTCCCTTTCCTAGTCAAAGAAAGG 3545
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3546 GGTGACAGATGGCATCTGGAAAATCGGGTCACTCCCACCCTAATACTGCGCTTTTCCAACAGTCTTAGCAAATA 3619
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3620 GCTCACCAGGAGATTATATCCCGCCCCTGGCTCGGAGGGTCCTACGCCCACAGATTCTCGCTCATTGCTAGCAC 3693
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3694 AGCAGTCTGAGCTCAAACTGCAAGGTGGCAGCGAGGCTGGGGGAGGGGCACCCGCCATTGCTGAGGCTTGAGTA 3767
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3768 GGTAAAGCGGCCCGGAAGCTCGAACTGGGTGGAGCCCACTGCAGCTCAAGGAGGCCTGCCTGTCTCTGTAGACT 3841
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3842 CCACCTCTGGGGGCAGGGCATTGCCAAACAAAAGGCAGCAGAATCCTCTGCAGACTTAAATGTCCCTGTCTGAC 3915
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3916 AGCTTTGAAGAGAGTAGTGGTTCTCCCAGCACGCAGCTGGAGATCTGAGAATGGACAGACTGCCTCCTCAAGTG 3989
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3990 GGTCCCTGACCCCCGAGTAGCCTAACTGGGAGGCACCCCCCAGTAGGGGCAGACAGACACCTCACACGGCCGGG 4063
Query 250 -------------------------------------------------------------------------- 249
Sbjct 4064 TACTTCTCTGAGACAAAACTTCCAGAGGAATGATCAGGCAGCAACATTTGCTGTTCACCAATATCTGCTGTTCT 4137
Query 250 -------------------------------------------------------------------------- 249
Sbjct 4138 GCAGCCTCTGCTGCTGATACCCAGGCAAACAGGGTCTGGAGTGGACCTCCAGCAAACTCCAACATTCCTACAGC 4211
Query 250 -------------------------------------------------------------------------- 249
Sbjct 4212 TGAGGGTCCTGATTGTTAGAAGGAAAACTAACAAACAGAAAGGACATCCACACCAAAACCCCATCTGTATGTCA 4285
Query 250 -------------------------------------------------------------------------- 249
Sbjct 4286 CCATCATCAAAGACCAAAGGTAGATAAAACCACAAAGATGGGGAAAAAACAGAGCAGAAAAAACGGAAATTCTA 4359
Query 250 -------------------------------------------------------------------------- 249
Sbjct 4360 AAAATCAGAGTGCCTATCCTCCTCCAAAGGAACACAGCTCCTCACCAGCAATGGAACAAAGCTGGATGGAGAAT 4433
Query 250 -------------------------------------------------------------------------- 249
Sbjct 4434 GACGAGTTGAGAGAAGAAGGCTTCAGACAATCAAACTACTCCAAGCTAAAGGAGGAAGTTCGAACCAATGGCAA 4507
Query 250 -------------------------------------------------------------------------- 249
Sbjct 4508 AGAAGTTAAAAACCTTGAAAAAAGATTAGACAAATCACTAACTAGAATAACCAATGCAGAGAAGTCCTTAAAGG 4581
Query 250 -------------------------------------------------------------------------- 249
Sbjct 4582 ACCTGATGGAGCTGAAAACCACAGCACAAGAACTATCTGATGAATGCACAAGCCTCAGTAGCCGATTCGATCAA 4655
Query 250 -------------------------------------------------------------------------- 249
Sbjct 4656 CTGGAAGAAAGGGTATCAGTGATGGAAGATCAAATGAATGAAATGAAGCGAGAAGAGAAGTTTAGAGAAAAAAG 4729
Query 250 -------------------------------------------------------------------------- 249
Sbjct 4730 AATAAAAAGAAACAAAGCCTCCAAGAAATATGGGACTATGTGAAAAGACCAAATCTACGTCTGATTGGTGTACC 4803
Query 250 -------------------------------------------------------------------------- 249
Sbjct 4804 TGAAAGTGACGGGGAGAATGGAACCAAGTTGGAAAACACTCTGCAGGATATTATCCAGGAGAACTTCCCCAATC 4877
Query 250 -------------------------------------------------------------------------- 249
Sbjct 4878 TAGCAAGGCAGGCCAACATTCAAACACCACAAAGGTACTCCTCGAGAAGAGCAACTCCAAGACACATAATTGTC 4951
Query 250 -------------------------------------------------------------------------- 249
Sbjct 4952 AGATTCACCAAAGTTGAAATGAAGGAAAAGATGTTAAGGGCAGCCAGAGAGAAAGGTCGGGTTACCCACAAAGG 5025
Query 250 -------------------------------------------------------------------------- 249
Sbjct 5026 GAAGCCCATCAGACTAACAGCTGATCTCTTGGCAGAAACTCTACAAGCCAGAAGAGAGTGGGGGCCAACATTCA 5099
Query 250 -------------------------------------------------------------------------- 249
Sbjct 5100 ACATTCTTAAAAGAATTTTCAACCCAGAATTTCATATTCAGCCAAACTAAGCTTCAGAAGTGAAGGAGAAATAA 5173
Query 250 -------------------------------------------------------------------------- 249
Sbjct 5174 AATCCTTTACAGACAAGCAAATGCTGAGAGATTTTGTCACCACCAAGCCTGCCCTAAAAGAGCTCCTGAAGGAA 5247
Query 250 -------------------------------------------------------------------------- 249
Sbjct 5248 GCACTAAACATGGAAAGGAACAACTGGTACCAGCCACTGCAAAAACATGCCAAATTGTAAAGACCATTGAGGCT 5321
Query 250 -------------------------------------------------------------------------- 249
Sbjct 5322 AGGAAGAACCTGCATCAACCAACGAGCAAAATAACCAGCTAACATCATAATGACAGGATCGAATTCACACATAA 5395
Query 250 -------------------------------------------------------------------------- 249
Sbjct 5396 CAATACTAACCTTAAATGTAACTGGGCTAAATGCTCCAATTAAAAGACACAGACTGGCAAATTGGATAAAGAGT 5469
Query 250 -------------------------------------------------------------------------- 249
Sbjct 5470 CAAGACCCATCAGTGTGCTGTATTCAGGAAACCCATCTCACCTGCAGAGACACACATAGGCTCAAAATAAAGGG 5543
Query 250 -------------------------------------------------------------------------- 249
Sbjct 5544 ATGGAGGAAGACCTACGAAGCAAATGGAAAACAAAAAAAGGCAGGGGTTGCAATCCTAGTCTCATATAAAACAG 5617
Query 250 -------------------------------------------------------------------------- 249
Sbjct 5618 ACTTTAAACGAACAAAGATCAAAGGAGACAAAGAAGGCCATTACATAATGGTGAAGGGATCAGTTCAACAAGAA 5691
Query 250 -------------------------------------------------------------------------- 249
Sbjct 5692 GAGCTAACTATCCTAAATATATATGCACCCAATACAAGAGCACCTAGATTCATAAAGCAAGTCCTTAGAGACCT 5765
Query 250 -------------------------------------------------------------------------- 249
Sbjct 5766 ACAAAGAGACTTAGACTCCCACACAATAATAATGGGAGACTTTAACACCCCACTGTCAACATTAGACAGATCAA 5839
Query 250 -------------------------------------------------------------------------- 249
Sbjct 5840 CGAGACAGAAGTTAACAAGGATATCCAGGAATTGAACTCAGCTCTGCACCAAGTGTACCTAATAGACATCTACA 5913
Query 250 -------------------------------------------------------------------------- 249
Sbjct 5914 GAACTCTCCACCCCAAATCAACAGAATATACATTCTTTTCAGCACCACACCACACCTATTCCAAAATTGACCAC 5987
Query 250 -------------------------------------------------------------------------- 249
Sbjct 5988 ATAGTTGGAAGTAAAGCACTCCTCAGCAAATGTAAAAGAACAGAAATTATAACAAACTGTCTCTCAGACCACAG 6061
Query 250 -------------------------------------------------------------------------- 249
Sbjct 6062 TGCAATCAAACTAGAACTCAGGATTAAGAAACTCACTCAAAACCGCTCAACTACATGGAAACTGAACAACTGGC 6135
Query 250 -------------------------------------------------------------------------- 249
Sbjct 6136 TCCTGAAAGACTACTGGGTACATAACGAAATGAAGGCAGAAATAAAGATGTTCTTTGAAACCAACGAGAACAAA 6209
Query 250 -------------------------------------------------------------------------- 249
Sbjct 6210 GACATAACATACCAGAATCTCTGGGACACATTCAAAGCAGTGTGTAGAGGGAAATTTATAGCACTAAATGCCCA 6283
Query 250 ------ 249
Sbjct 6284 CAAGAG 6289