Nucleotide Global Alignment

Description

Query:
ccsbBroad304_10792
Subject:
NR_148879.2
Aligned Length:
2043
Identities:
205
Gaps:
1811

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  GGAAGTGGAGTGCGCTGCGGTGCGAGCTGGGCCGGCGGGGTGGTTCGAGAGCGCGCAGAGTCCAGACTGGCGGC  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  AGGGCCCGAGGGGCCGACCCGCAGCGTCCCTGGTCTCTCCAGCCCTCACTCGGAACCGCACTGACAATACCCTC  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  CCCTCCCTTGGGCTGGACCCCTCTCTACAGCTAGGAGCCAATGGCAGAAGACAAAACCAAACCGAGTGAGTTGG  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  ACCAAGGGAAGTATGATGCTGATGACAACGTGAAGATCATCTGCCTGGGAGACAGCGCAGTGGGCAAATCCAAA  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  CTCATGGAGAGATTTCTCATGGATGGCTTTCAGCCACAGCAGCTGTCCACGTACGCCCTGACCCTGTACAAGCA  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  CACAGCCACGGTAGATGGCAAGACCATCCTTGTGGACTTTTGGGACACGGCAGGCCAGGAGCGGTTCCAGAGCA  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  TGCATGCCTCCTACTACCACAAGGCCCATGCCTGCATCATGACATAAACGTGACCCAAAAAAGCTTCAATTTTG  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  CCAAGAAGTTCTCCCTGCCCCTGTATTTCGTCTCGGCTGCTGATGGTACCAATGTTGTGAAGCTCTTCAATGAT  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  GCAATTCGATTAGCTGTGTCTTACAAACAGAACTCCCAGGACTTCATGGATGAGATTTTTCAGGAGCTCGAGAA  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  CTTCAGCTTGGAGCAGGAAGAGGAGGACGTGCCAGACCAGGAACAGAGCAGCAGCATCGAGACCCCATCAGAGG  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  AGGTGGCCTCTCCCCACAGCTGAGGGGCTGGGGCTAGGGGTGGGTGGAGCCCTTTTAAAATACCCTTCCCTTCA  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  ACAACTCTCCAGCTCTGAATGGAGAAACTCTCTAGGCCATCCCCTCTTCTACCTCCTGCAACCCACCCATCCTA  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  TTAGCCTCCCACATTCAAGGCCCGTGATACAGGGATGAGGTCAGCACCAGCAAACTCTGGACTGGTGGAAGAAT  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  TCCCCACCAGATCTCCTTGAAGCAGAATTAGGGATCAGCATCATTAACACCTTCCCCACCCCCTCCCCCCAGGC  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  AGACAGTGAAGAGAATCAGAAAACATGATTATGTGTCACTTTAATACAGGAAATTTAGGTGTTTTTTGGTGTTT  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  TTGTTTTTGTTTTCTTTCCAAAGCTCACCTCGGGGACAATTCCTTGGGCTTCTCCTGAGGTAATGATTACCCCC  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  CCACCCACAGCTGAGTCTGTGAGGCCCCATCCTTTCCCTACGTTTTCTCCCATCTTTTTTCCTCTTCAATCTCC  1258

Query    1  --------------------------------------ATGGAGTCTCGCTCTGTTGCCCAGGCTGGAGTGCAG  36
                                                  |.|||||||||||||||.| ||||||||||||||||
Sbjct 1259  CAGTCATCTGGTTTGTTTGTTTCTTTGTTCGTCCTGAGACGGAGTCTCGCTCTGTCG-CCAGGCTGGAGTGCAG  1331

Query   37  TGGC-CTGATCTCGGCTCACTGCAACCTCTGCCTCCCAGGTTCAAGCGATTCTTCTGCCTCAGCCTCCAGAGTA  109
            |||| |.| |||||||||.||||||||||||.|||||.|||||||.|||||||.||||||||||||||.||||.
Sbjct 1332  TGGCGCAG-TCTCGGCTCGCTGCAACCTCTGACTCCCTGGTTCAAACGATTCTCCTGCCTCAGCCTCCCGAGTG  1404

Query  110  GCTGGGACTATAGACATGCACCACCACGCCCGGCTAA-TTTTGTATTTTTGGTCGAGACGGGGTTTTGCCATGT  182
            ||||             |||.||||||||||.||||| ||||||||||||.||.||||||||||||..||||||
Sbjct 1405  GCTG-------------GCATCACCACGCCCAGCTAATTTTTGTATTTTTAGTAGAGACGGGGTTTCACCATGT  1465

Query  183  TAGTCAGGCTGGTCTTGAACTCCTGACCTCAAGTGATCC-ACCACCTCGGCCTCCCAAAGTGTTGAGA------  249
            |...||||.||||||.||.|||||.|||||  ||||||| .||.||||||||||||||||||.||.||      
Sbjct 1466  TGCCCAGGATGGTCTCGATCTCCTCACCTC--GTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAG  1537

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 1538  GCATGAGCCACCGCGCCCGGCCCCAATCATCTGTTTTTAAACAATCGTTTTTGAGCAGATAGCTATTCATTCCA  1611

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 1612  GATTTCCGTGTACCCACTCTGTTTCAGGAGCTCTTCTAGGTAAAGCTGAGATCACAGGAACAGCAGGTGACAGG  1685

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 1686  CCTAGCTATAGTTAGGAATACACAAGCGGTAAAATCGAGTCCTTACAGCCATACCACAAGGTACGTCCATTTGG  1759

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 1760  ACTACAAGAAGAGCTTCCTTTAAAGTTCCTATTTCAGCATAAAGAGGCTGTCCTTTTTTTTTAGGAATAGTTTG  1833

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 1834  GACCTTGTGCCTCCTGTGGGAGGCTGAGGACTGCAAGAGGAGAGCTAGCAGATATGCCTGTTCACCCCTCTCTG  1907

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 1908  GTACTTGTGGCTTGCTAGTATGTTTTTATGATAATCTCGGGCATTGTTTGCATTGTGTTTATTAATAGGGTTTT  1981

Query  250  ---------------------------------------------  249
                                                         
Sbjct 1982  GTTTTTATTGTTTCCTTTTTTACAGTAAAGGCTGAATGACATAAA  2026

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