Nucleotide Global Alignment

Description

Query:
ccsbBroad304_10792
Subject:
NR_148881.2
Aligned Length:
2050
Identities:
205
Gaps:
1818

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  GGAAGTGGAGTGCGCTGCGGTGCGAGCTGGGCCGGCGGGGTGGTTCGAGAGCGCGCAGAGTCCAGACTGGCGGC  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  AGGGCCCGAGGGGCCGACCCGCAGCGTCCCTGGTCTCTCCAGCCCTCACTCGGAACCGCACACAGTGACAATAC  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  CCTCCCCTCCCTTGGGCTGGACCCCTCTCTACAGCTAGGAGCCAATGGCAGAAGACAAAACCAAACCGAGTGAG  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  TTGGACCAAGGGAAGTATGATGCTGATGACAACGTGAAGATCATCTGCCTGGGAGACAGCGCAGTGGGCAAATC  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  CAAACTCATGGAGAGATTTCTCATGGATGGCTTTCAGCCACAGCAGCTGTCCACGTACGCCCTGACCCTGTACA  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  AGCACACAGCCACGGTAGATGGCAAGACCATCCTTGTGGACTTTTGGGACACGGCAGGCCAGGAGCGGTTCCAG  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  AGCATGCATGCCTCCTACTACCACAAGGCCCATGCCTGCATCATGCAGACATAAACGTGACCCAAAAAAGCTTC  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  AATTTTGCCAAGAAGTTCTCCCTGCCCCTGTATTTCGTCTCGGCTGCTGATGGTACCAATGTTGTGAAGCTCTT  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  CAATGATGCAATTCGATTAGCTGTGTCTTACAAACAGAACTCCCAGGACTTCATGGATGAGATTTTTCAGGAGC  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  TCGAGAACTTCAGCTTGGAGCAGGAAGAGGAGGACGTGCCAGACCAGGAACAGAGCAGCAGCATCGAGACCCCA  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  TCAGAGGAGGTGGCCTCTCCCCACAGCTGAGGGGCTGGGGCTAGGGGTGGGTGGAGCCCTTTTAAAATACCCTT  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  CCCTTCAACAACTCTCCAGCTCTGAATGGAGAAACTCTCTAGGCCATCCCCTCTTCTACCTCCTGCAACCCACC  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  CATCCTATTAGCCTCCCACATTCAAGGCCCGTGATACAGGGATGAGGTCAGCACCAGCAAACTCTGGACTGGTG  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  GAAGAATTCCCCACCAGATCTCCTTGAAGCAGAATTAGGGATCAGCATCATTAACACCTTCCCCACCCCCTCCC  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  CCCAGGCAGACAGTGAAGAGAATCAGAAAACATGATTATGTGTCACTTTAATACAGGAAATTTAGGTGTTTTTT  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  GGTGTTTTTGTTTTTGTTTTCTTTCCAAAGCTCACCTCGGGGACAATTCCTTGGGCTTCTCCTGAGGTAATGAT  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  TACCCCCCCACCCACAGCTGAGTCTGTGAGGCCCCATCCTTTCCCTACGTTTTCTCCCATCTTTTTTCCTCTTC  1258

Query    1  ---------------------------------------------ATGGAGTCTCGCTCTGTTGCCCAGGCTGG  29
                                                         |.|||||||||||||||.| |||||||||
Sbjct 1259  AATCTCCCAGTCATCTGGTTTGTTTGTTTCTTTGTTCGTCCTGAGACGGAGTCTCGCTCTGTCG-CCAGGCTGG  1331

Query   30  AGTGCAGTGGC-CTGATCTCGGCTCACTGCAACCTCTGCCTCCCAGGTTCAAGCGATTCTTCTGCCTCAGCCTC  102
            ||||||||||| |.| |||||||||.||||||||||||.|||||.|||||||.|||||||.|||||||||||||
Sbjct 1332  AGTGCAGTGGCGCAG-TCTCGGCTCGCTGCAACCTCTGACTCCCTGGTTCAAACGATTCTCCTGCCTCAGCCTC  1404

Query  103  CAGAGTAGCTGGGACTATAGACATGCACCACCACGCCCGGCTAA-TTTTGTATTTTTGGTCGAGACGGGGTTTT  175
            |.||||.||||             |||.||||||||||.||||| ||||||||||||.||.||||||||||||.
Sbjct 1405  CCGAGTGGCTG-------------GCATCACCACGCCCAGCTAATTTTTGTATTTTTAGTAGAGACGGGGTTTC  1465

Query  176  GCCATGTTAGTCAGGCTGGTCTTGAACTCCTGACCTCAAGTGATCC-ACCACCTCGGCCTCCCAAAGTGTTGAG  248
            .|||||||...||||.||||||.||.|||||.|||||  ||||||| .||.||||||||||||||||||.||.|
Sbjct 1466  ACCATGTTGCCCAGGATGGTCTCGATCTCCTCACCTC--GTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGG  1537

Query  249  A-------------------------------------------------------------------------  249
            |                                                                         
Sbjct 1538  ATTACAGGCATGAGCCACCGCGCCCGGCCCCAATCATCTGTTTTTAAACAATCGTTTTTGAGCAGATAGCTATT  1611

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 1612  CATTCCAGATTTCCGTGTACCCACTCTGTTTCAGGAGCTCTTCTAGGTAAAGCTGAGATCACAGGAACAGCAGG  1685

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 1686  TGACAGGCCTAGCTATAGTTAGGAATACACAAGCGGTAAAATCGAGTCCTTACAGCCATACCACAAGGTACGTC  1759

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 1760  CATTTGGACTACAAGAAGAGCTTCCTTTAAAGTTCCTATTTCAGCATAAAGAGGCTGTCCTTTTTTTTTAGGAA  1833

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 1834  TAGTTTGGACCTTGTGCCTCCTGTGGGAGGCTGAGGACTGCAAGAGGAGAGCTAGCAGATATGCCTGTTCACCC  1907

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 1908  CTCTCTGGTACTTGTGGCTTGCTAGTATGTTTTTATGATAATCTCGGGCATTGTTTGCATTGTGTTTATTAATA  1981

Query  250  ----------------------------------------------------  249
                                                                
Sbjct 1982  GGGTTTTGTTTTTATTGTTTCCTTTTTTACAGTAAAGGCTGAATGACATAAA  2033

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