Nucleotide Global Alignment

Description

Query:
ccsbBroad304_10792
Subject:
NR_158651.1
Aligned Length:
2850
Identities:
214
Gaps:
2606

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  AACGGGAACCGGCGCCCGGAATGTCAGCGTGTGAAGTAGGCGCTGGCAACGCGGGGTTACCCGCTGTTATTGAG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  GAGTAACGGCCCAGCGGACCACCCAGGCTTGAGGCAGCGGCGGGAACCACTCGGTTTGCTGCGATACCATGGAA  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  GGAGGCGGGGGAAGCGGCGACAAAACCACAGGGGTATTGGCCGGCTTTTTCGGAGCCGGCGAAGCAGGTTACTC  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  GCACGCGGATTTGGCTGGCGTCCCGCTAACTGGTATGAACCCTCTGTGTCCTTATTTAAATGTGGATCCACGAT  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  ACCTCGTGCAGGATACAGATGAGTTCATTTTACCTACCGGAGCTAATAAAACCTGGGGCAGATTTGAGCTGGCC  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  TTCTTTACGATTGGAGGGTGTTGCATGACAGGGGCTGCGTTTGGGGCAATGAATGGTCTTCGGCTAGGATTGAA  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  GGAAACCCAGAACATGGCCTGGTCCAAACCAGGAAATGTACAGATTTTGAATATGGTGACTAGGCAAGGGGCAC  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  TTTGGGCTAATACTCTAGGTTCTCTGGCGTTGCTCTATAGTGCATTTGGTGTCATCATTGAGAAAACACGAGGT  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  GCAGAAGATGACCTTAACACAGTAGCAGCTGGAACCATGACAGGCATGTTGTATAAATGTACAGGCTGGAGTGC  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  AGTGGCGTGATCTCGGCTAGCTACAACCTCCACCTCCCAGCCGCCTGCCTTGGCCTCCCAAAGTGCCGAGATTG  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  CAGCCTCTGCCCGGCTGCCACCCCGTCTGGGAAGTGAGGAGCGTCTCTGCCTGGCCGCCCATCGTCTGGGATGT  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  GAGGAGCCCCTCTGCCCGGGCTGCCCAGTCTGGGAAGTGAGGAGCGCCTTTTCCCGGCTGCCATCCCGTCTAGG  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  AAGTGAGGAGCGTCTCGGCCCGGCCACCCATCGTCTGAGATGAGGGGAGCGCCTCTGCCCCGCCGCCCCGTCTG  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  GGATGTGAGGAGCGCCTCTGCCTGGCCGCGACCCCGTCTGGGAGTGTCAGAGATGGCTTTGGATTCCCCGTTCT  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  GTGTGCTGCTGTCTGGCTCCTGAACCCAGCTGTAGAGGTGTGTGTCAATCCCAACTGGTGAAGTACTGAGAAGA  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  AGCTACACAAAAGGCAGCAAAGTATTAGTAAGTGTACCTCTGACATTTTAACCACCTCTGACTTTTCCATGGAA  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  TGGACAAGTAGTAGTCTCTGTCAGAGCTACATTTTAAAGGAGAAAAAGAAACGTGAAGTCATGAACTGTTTATT  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  TATGCTGTTATTTTTGTGTTTACTCACCTCATTTATATTGACTTGTAAATTAGTAATTTCTGAACTATTATTTA  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  TCAATTCATTGCCTACATGTCAGCAAACAAATTTTCTTCTTAATAAAGAATCCAGTTGCTGGGCACAATGGTTC  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  ACACCTGTAATCTCAGCACGTTTGGAGGGCAAGGCAGGAGGATTCCTTGGGGCTAGGAGTTCAAGACCAGCCTG  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  GGCAATATAGCAAGATTTCATCTCTACAAAAAAATGAAAACATTGGCTGGGCATGGTGGCTCATTCCTATAGTT  1554

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1555  CAGGCTACTGAGGAGCCTGATGTAGGAGGATCACGTGACCCCAGTAGTTTGAGGCTGCAGTGAGCTATGATCCT  1628

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1629  AACACTGCTCTCCAGCCTGGGTGACACACCAAGTTGCCATCTCTTCAAAAAAGGAATCTAGAGACATCAGTGTG  1702

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1703  TGCACAAGCATGGTTTGTGAATTTGGAAGTGTGTATGTGCATAGTTGTGCTCAAGAATGTGTTGATGATTATAC  1776

Query    1  --------------------------------------------ATGGAGTCTCGCTCTGTTGCCCAGGCTGGA  30
                                                        |||||||||.||||||||| ||||||||||
Sbjct 1777  CTTCTCAGAATGAAGGTAATTTTTTTTTTTTCTTTTTTTTTGAGATGGAGTCTTGCTCTGTTG-CCAGGCTGGA  1849

Query   31  GTGCAGTGGCCTGATCTCGGCTCACTGCAACCTCTGCCTCCCAGGTTCAAGCGATTCTTCTGCCTCAGCCTCCA  104
            |||||||||  ||.||||.|||||||||||||||||||||||.|.|||||||..||||.||||||||||||||.
Sbjct 1850  GTGCAGTGG--TGCTCTCAGCTCACTGCAACCTCTGCCTCCCGGCTTCAAGCAGTTCTCCTGCCTCAGCCTCCC  1921

Query  105  GAGTAGCTGGGACTATAGACATGCACCACCACGCCCGGCTAATTTTGTAT-TTTTGGTCGAGACGGGGTTTTGC  177
            .||||||||||||||.||.||..|||||||||.|||||||||||||.|.| ||||.||.|||||||||||||.|
Sbjct 1922  AAGTAGCTGGGACTACAGGCACACACCACCACTCCCGGCTAATTTTTTGTGTTTTAGTAGAGACGGGGTTTTAC  1995

Query  178  CATGTTAGTCAGGCTGGTCTTGAACTCCTGACCTCAAGTGATCCA-CCACCTCGGCCTCCCAAAGTGTTGAGA-  249
            ||||||.|.||||.||||||.||.|.||.|||||  .|||||||| ||||||.|||||||||||||||||.|| 
Sbjct 1996  CATGTTGGCCAGGATGGTCTCGATCCCCCGACCT--TGTGATCCACCCACCTTGGCCTCCCAAAGTGTTGGGAT  2067

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2068  TACAGGTGTGAGCCACCGTGCCTGGCCTGAAGGTCATTTTTATAAAGATCTCTCCACGTCTTAGATTTGATTCT  2141

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2142  TCCTTTAAATATTTTTCTCATTGACATTTGAAAGCACCTGACCTTATATAAAATGAACAATTTTCATAACTCCA  2215

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2216  TAAAAGGAGAATTATGGCATCATCTATTTCTTTCTCTTGTCTCATAAATCTAAACCATCAACCTGCTTATTTTT  2289

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2290  GTATACTGTCACACTGTGTATTCCCTGCATTGAATGCCTGTCTGTTGACATTATCTGTAAAAATTGTGGGAAGT  2363

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2364  TTTCTGCACCCTGAAATTTCTGTTATGCGGATTAAATATCCACTATCCATGTTTTTCCAAGTCTTACAGTAGAA  2437

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2438  AGGGTAAATGCAGCCCTCACAGCAGCCTGTTGTTCGTCCTGCAAATGTGTTTCCATCACATTACACAAAGCCTC  2511

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2512  TTTGTCTTCGTGGTTCTACCCTACTAATAAGTTTTTTAAAAAATTATGTAATGTGTGTATATACAAATACCTAT  2585

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2586  ATGTATGTGTGTACACATACAGCTGATATCTGCTGAGATTATGTATGCATGAACTATAGAATTAACTTGTAATT  2659

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2660  TTAAGAAAATAAATTATTTTGTAAAGATAAATCTCATGTTTAAGAAGAGGAATTACAGTTGAATCATTTAGGGA  2733

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2734  TGCCTCAGCCTAAACATAATATGGAAAAAGCCATAACCAAAAGTCATTTTAGAGTACTGCTAGGTTACTCAACC  2807

Query  250  --------------------------------------  249
                                                  
Sbjct 2808  TATCATCACATTTAATTAAAATGTCAGTTTGAACCATG  2845

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