Nucleotide Global Alignment

Description

Query:
ccsbBroad304_10792
Subject:
NR_158652.1
Aligned Length:
2858
Identities:
214
Gaps:
2614

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  AACGGGAACCGGCGCCCGGAATGTCAGCGTGTGAAGTAGGCGCTGGCAACGCGGGGTTACCCGCTGTTATTGAG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  GAGTAACGGCCCAGCGGACCACCCAGGCTTGAGGCAGCGGCGGGAACCACTCGGTTTGCTGCGATACCATGGAA  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  GGAGGCGGGGGAAGCGGCGACAAAACCACAGGGGTATTGGCCGGCTTTTTCGGAGCCGGCGAAGCAGGTTACTC  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  GCACGCGGATTTGGCTGGCGTCCCGCGATACAGATGAGTTCATTTTACCTACCGGAGCTAATAAAACCTGGGGC  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  AGATTTGAGCTGGCCTTCTTTACGATTGGAGGGTGTTGCATGACAGGGGCTGCGTTTGGGGCAATGAATGGTCT  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  TCGGCTAGGATTGAAGGAAACCCAGAACATGGCCTGGTCCAAACCAGGAAATGTACAGATTTTGAATATGGTGA  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  CTAGGCAAGGGGCACTTTGGGCTAATACTCTAGGTTCTCTGGCGTTGCTCTATAGTGCATTTGGTGTCATCATT  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  GAGAAAACACGAGGTGCAGAAGATGACCTTAACACAGTAGCAGCTGGAACCATGACAGGCATGTTGTATAAATG  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  TACAGCCTCGGCCTCCCGAGGTGCCGGGATTGCAGATGGAGTCTCGTTCACTCAGTGCTCAATGTTGCCCAGGC  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  TGGAGTGCAGTGGCGTGATCTCGGCTAGCTACAACCTCCACCTCCCAGCCGCCTGCCTTGGCCTCCCAAAGTGC  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  CGAGATTGCAGCCTCTGCCCGGCTGCCACCCCGTCTGGGAAGTGAGGAGCGTCTCTGCCTGGCCGCCCATCGTC  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  TGGGATGTGAGGAGCCCCTCTGCCCGGGCTGCCCAGTCTGGGAAGTGAGGAGCGCCTTTTCCCGGCTGCCATCC  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  CGTCTAGGAAGTGAGGAGCGTCTCGGCCCGGCCACCCATCGTCTGAGATGAGGGGAGCGCCTCTGCCCCGCCGC  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  CCCGTCTGGGATGTGAGGAGCGCCTCTGCCTGGCCGCGACCCCGTCTGGGAGTGTCAGAGATGGCTTTGGATTC  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  CCCGTTCTGTGTGCTGCTGTCTGGCTCCTGAACCCAGCTGTAGAGGTGTGTGTCAATCCCAACTGGTGAAGTAC  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  TGAGAAGAAGCTACACAAAAGGCAGCAAAGTATTAGTAAGTGTACCTCTGACATTTTAACCACCTCTGACTTTT  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  CCATGGAATGGACAAGTAGTAGTCTCTGTCAGAGCTACATTTTAAAGGAGAAAAAGAAACGTGAAGTCATGAAC  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  TGTTTATTTATGCTGTTATTTTTGTGTTTACTCACCTCATTTATATTGACTTGTAAATTAGTAATTTCTGAACT  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  ATTATTTATCAATTCATTGCCTACATGTCAGCAAACAAATTTTCTTCTTAATAAAGAATCCAGTTGCTGGGCAC  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  AATGGTTCACACCTGTAATCTCAGCACGTTTGGAGGGCAAGGCAGGAGGATTCCTTGGGGCTAGGAGTTCAAGA  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  CCAGCCTGGGCAATATAGCAAGATTTCATCTCTACAAAAAAATGAAAACATTGGCTGGGCATGGTGGCTCATTC  1554

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1555  CTATAGTTCAGGCTACTGAGGAGCCTGATGTAGGAGGATCACGTGACCCCAGTAGTTTGAGGCTGCAGTGAGCT  1628

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1629  ATGATCCTAACACTGCTCTCCAGCCTGGGTGACACACCAAGTTGCCATCTCTTCAAAAAAGGAATCTAGAGACA  1702

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1703  TCAGTGTGTGCACAAGCATGGTTTGTGAATTTGGAAGTGTGTATGTGCATAGTTGTGCTCAAGAATGTGTTGAT  1776

Query    1  ----------------------------------------------------ATGGAGTCTCGCTCTGTTGCCC  22
                                                                |||||||||.||||||||| ||
Sbjct 1777  GATTATACCTTCTCAGAATGAAGGTAATTTTTTTTTTTTCTTTTTTTTTGAGATGGAGTCTTGCTCTGTTG-CC  1849

Query   23  AGGCTGGAGTGCAGTGGCCTGATCTCGGCTCACTGCAACCTCTGCCTCCCAGGTTCAAGCGATTCTTCTGCCTC  96
            |||||||||||||||||  ||.||||.|||||||||||||||||||||||.|.|||||||..||||.|||||||
Sbjct 1850  AGGCTGGAGTGCAGTGG--TGCTCTCAGCTCACTGCAACCTCTGCCTCCCGGCTTCAAGCAGTTCTCCTGCCTC  1921

Query   97  AGCCTCCAGAGTAGCTGGGACTATAGACATGCACCACCACGCCCGGCTAATTTTGTAT-TTTTGGTCGAGACGG  169
            |||||||..||||||||||||||.||.||..|||||||||.|||||||||||||.|.| ||||.||.|||||||
Sbjct 1922  AGCCTCCCAAGTAGCTGGGACTACAGGCACACACCACCACTCCCGGCTAATTTTTTGTGTTTTAGTAGAGACGG  1995

Query  170  GGTTTTGCCATGTTAGTCAGGCTGGTCTTGAACTCCTGACCTCAAGTGATCCA-CCACCTCGGCCTCCCAAAGT  242
            ||||||.|||||||.|.||||.||||||.||.|.||.|||||  .|||||||| ||||||.|||||||||||||
Sbjct 1996  GGTTTTACCATGTTGGCCAGGATGGTCTCGATCCCCCGACCT--TGTGATCCACCCACCTTGGCCTCCCAAAGT  2067

Query  243  GTTGAGA-------------------------------------------------------------------  249
            ||||.||                                                                   
Sbjct 2068  GTTGGGATTACAGGTGTGAGCCACCGTGCCTGGCCTGAAGGTCATTTTTATAAAGATCTCTCCACGTCTTAGAT  2141

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2142  TTGATTCTTCCTTTAAATATTTTTCTCATTGACATTTGAAAGCACCTGACCTTATATAAAATGAACAATTTTCA  2215

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2216  TAACTCCATAAAAGGAGAATTATGGCATCATCTATTTCTTTCTCTTGTCTCATAAATCTAAACCATCAACCTGC  2289

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2290  TTATTTTTGTATACTGTCACACTGTGTATTCCCTGCATTGAATGCCTGTCTGTTGACATTATCTGTAAAAATTG  2363

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2364  TGGGAAGTTTTCTGCACCCTGAAATTTCTGTTATGCGGATTAAATATCCACTATCCATGTTTTTCCAAGTCTTA  2437

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2438  CAGTAGAAAGGGTAAATGCAGCCCTCACAGCAGCCTGTTGTTCGTCCTGCAAATGTGTTTCCATCACATTACAC  2511

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2512  AAAGCCTCTTTGTCTTCGTGGTTCTACCCTACTAATAAGTTTTTTAAAAAATTATGTAATGTGTGTATATACAA  2585

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2586  ATACCTATATGTATGTGTGTACACATACAGCTGATATCTGCTGAGATTATGTATGCATGAACTATAGAATTAAC  2659

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2660  TTGTAATTTTAAGAAAATAAATTATTTTGTAAAGATAAATCTCATGTTTAAGAAGAGGAATTACAGTTGAATCA  2733

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2734  TTTAGGGATGCCTCAGCCTAAACATAATATGGAAAAAGCCATAACCAAAAGTCATTTTAGAGTACTGCTAGGTT  2807

Query  250  ----------------------------------------------  249
                                                          
Sbjct 2808  ACTCAACCTATCATCACATTTAATTAAAATGTCAGTTTGAACCATG  2853

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