Nucleotide Global Alignment

Description

Query:
ccsbBroad304_10792
Subject:
XR_001738428.2
Aligned Length:
3040
Identities:
217
Gaps:
2791

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  TCTTTGCATGTCTTCTTATCACCTGCAATGCACTGACCCTTAGCTTATGCAGCATTGCACATATAGGTTTTTTT  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  TTTTTTTTTTTTTTTGAGACAGACTCTTGCCCTGTCGCCCAGGCTAGTGGCGCGATCTGGGCTCACTGCAACCT  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  CCACCTCCCAGGTTCAAGCAATTCTCCTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGTGCATGCCACCATG  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  CCCTGCTGATTTTTGTATTTTTAGTACCGACAGGGTTTCACCATGTTGGTCAGGCTGGTCTCAAACTCTTGTTT  296

Query    1  -------------------------------ATGGAGTCTCGCTCTGTTGCCCAGGCTGGAGTGCAGTGGCCTG  43
                                           ||||||||||.|||||||||.||||||||||||||||.||.||
Sbjct  297  TTGTTTTGCTTTGTTTTGTTTTGCTTTTGAGATGGAGTCTCACTCTGTTGCTCAGGCTGGAGTGCAGTAGCATG  370

Query   44  ATCTCGGCTCACTGCAACCTCTGCCTCCCAGGTTCAAGCGATTCTTCTGCCTCAGCCTCCAGAGTAGCTGGGAC  117
            ||||.||||||||||||||||..|||||..|||||||||||||||.|..|||||||||||..|||.||||||||
Sbjct  371  ATCTTGGCTCACTGCAACCTCCACCTCCTGGGTTCAAGCGATTCTCCCACCTCAGCCTCCCAAGTGGCTGGGAC  444

Query  118  TATAGACATGCACCACCACGCCCGGCTAA-TTTTGTATTTTTGGTCGAGACGGGGTTTTGCCATGTTAGTCAGG  190
            ||.||.||||..||||||||||..||||| ||||||||||||.||.||||||||||||..|||||||.|.|.||
Sbjct  445  TACAGGCATGTGCCACCACGCCTAGCTAATTTTTGTATTTTTAGTAGAGACGGGGTTTCACCATGTTGGCCGGG  518

Query  191  CTGGTCTTGAACTCCTGACCTCAAGTGATCCACC-ACCTCGGCCTCCCAAAGTGTTGAGA--------------  249
            |||||||||||||||||||||||.|||||||||| .||||||||||||||||||.||.||              
Sbjct  519  CTGGTCTTGAACTCCTGACCTCAGGTGATCCACCTGCCTCGGCCTCCCAAAGTGCTGGGATTATAGGCATGAGC  592

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct  593  CACCGTGCCCGGCCTCACATACAGGTTTTGGGGACTTAACCTTATTCTGTCTGTTCCTTCCACATGTTTGCAGC  666

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct  667  TCAGAAGGCAGTGGTCTTGTCTAGGGTGCTCTCTATGCATCTTGCAGAAAGCAGTGTATAAGCAGCTATGTGGA  740

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct  741  CACAGCACATAAGAGCGCCCTGTGGTCCTATCACTTCTAGCAAGTCTCTGCTTCCTCTAAACTTACATACACAG  814

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct  815  GGACATCCTGTTCCTACAGACCACAGTAGATGAGGGCTGGACAGCCTGACAGACGCCGGGAGAAGTGAGTAGTT  888

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct  889  CTGACGCACCCGGCTTCCCTTCCCTTTCCAAACTCTTAGCTATTTTTTTTCTTTATTTTCCTTCCTGTGTTGAA  962

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct  963  AGAGCTATGGGGCCTGGACCATAGTAGGGTTTCCTGGGGACATTCCATAAATTCTTCATGGGTTATTTCTCTGG  1036

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 1037  AGAGGGGTGGGAGCAAGTAAGCTGGTAGATGGGAGGCCAGCAGGGGCCTGGGTATGAATGTCAAGTACCTCAAA  1110

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 1111  GCAGCGTGGGTGGGAAGGAAGGGTGAGCTGCACAGAGGAGGAAGGAGGGGTGTCATGAGCTCATAGAAACCGCC  1184

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 1185  AAAGAAAGGCCAAGCAAAGAGTGAGAAGAAGCAGCCAAATCACAGGTCAGAACAAGCTGTGGGTAACCACGCCC  1258

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 1259  CCAGCTTTGCCCTTGAACCTGCTGACTGGTCTCCACAGTAACTTGTCCGTCAGGGTTTCAATAAGGCCAGGAGA  1332

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 1333  ACTTGGCCAACTCAGGTGTGTGACTTGGATAGATGCCAAGCAGCCCCTAGTGTGTGCTGTGCACGATGCATGGA  1406

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 1407  GATATGGGGAAAGTCAACTCAAGGTCCCTTTGTATCTGGTTGGGTCCCTTTTCCTTTATTCACTTCTCATCCAT  1480

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 1481  CCATCCATTCAGCAAACACTGATTCCTTAATTCACATCTAGATCTGAAGAGAGTGAAAGCACTGGCCCCTAGCT  1554

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 1555  GACCTCTGTAGCAAGCCTGGACCTGAAGATCATTCTCAGTCTCCCTCCCTGGGCTCTAGAGCTACTTCTTTAAG  1628

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 1629  TAAAAATGGTGCCAAATTGGGTGTCAAGGCAAGAAGCAACTTGTCCTAGATCTCTATGCTTGGGCAAGTCAATT  1702

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 1703  TTCTTCTCTGGACCTCAGTTTCCCTGTCAAATAATGAGAGTATTGGGCCAGGCAATCTCTAAGGTTCCTTAAAG  1776

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 1777  AATGGTTCTATTTTTCAAAGCAGTTTTGAAGCCTATCCCATGAGTGAACACTCGGTGACAGGATTAAAGGGGAA  1850

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 1851  GAAGGGAACAGTCCAAAAAGCATGACCCCTGCCTTTCACAGAACTTTCAAGAGAATCAAGGAGACAGAATGACA  1924

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 1925  CACATGACCTGGAGCAGTGACTGAAGGCACTAGACAAGCTGGTACAAGCTGTTGGCTTCAGCCTGCTGCACAAG  1998

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 1999  AGGCCTCCCATGCTGCCATCCCCAGACAGCCTGTGCCCTCCAGCTGGCAGAAGTACCCTGGGAGGCGCAAGGTC  2072

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2073  CATGGTGGTGTGGGAGCAGATGTGCCCCAGGGCATGGACAGGAAGGTTGGAACCTGTGTCATGGAGCAGGAGCA  2146

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2147  GAGCGAGACTCTGTGCGGTTATGTGAAGCGAAGTGGCTATACCTTGCCCCAGAGTGAAGAAGGAAGGTGAGAGG  2220

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2221  AGAGAGGGGAGGAAAATAGGTCTCTGCCTGCATGTACCCTTGGCAGCCTTCTCTGAGAAGGTGACACAGATGAC  2294

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2295  ACTGTGGCCCCTCCAGGAGGTGTCAAGACAAATTTGGGTGACAATTTCTACCCAGTCACCCTCTCTTACTATGA  2368

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2369  GAAGGTGGATCTCCTGCTTATCTTCATATATGCGATTCGTTTCACAGGTGGGATAAACTACATCCACGCTCCAA  2442

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2443  TAACCAAGGAGTAAGAGATGGAAATTTGGGGAGGCTCTCAAAATCTCGATCAGTAATAAGGAAAGAACCCATAC  2516

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2517  TCCAGGCGGTGAGGCAGCAGGGGCTGTGAGAGGGGAGCTGCGTGCGGCTCTCAGCTTTGGACAAGGCCCTTAGA  2590

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2591  TCTTACATATGTGCGTGACAGTGAGGGACCCTCCATCTCTGCAGTGGTGAACAGAGGCAGGGTAATGGGGCACA  2664

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2665  AGTGCAGGGGCTGGATACTAGCAAGAAAGCGAGGGATTGAGTTAAAGGCTGAATTGTGTCCCCTGGAAATTCCT  2738

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2739  GTGTTGAAGCCTAACCCTAAGTACCTCAGAATGTGTTCTTATTTGAGACGGTGTCTTTTGTTACTGTTGTTTTG  2812

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2813  GTTTGGTTTTTTTGAGACGGGGTCTCGCTCTGTCTCCCAGTCTGGAGTGCAGTGGCGCGATCTCAGCTCCTTGC  2886

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2887  AGCCTCCATCTCCTGGACTCAAACCATCCTCCCACATCAGCCCTAGGAACCACAGGGATCTGTGGGGCCACAGG  2960

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2961  CACCTGTCTACACCTGGCTAATTTTTATTTTTATTTTTGTAGAGATGAGGTTTCATGATGCTAGCCAGGCTGGT  3034

Query  250  ------  249
                  
Sbjct 3035  CTTGAA  3040

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