Nucleotide Global Alignment

Description

Query:
ccsbBroad304_10792
Subject:
XR_001738632.2
Aligned Length:
3968
Identities:
216
Gaps:
3721

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  GTCCCGGGCGGATCCCGGGAAGGCGGAAGGCTTCGGCAGAGCTGCGCCGCCGAGGCTGAGCGGTCCCTTCTCGC  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  TGCGGCCGCCCAGGTGCCCGCGCCCGTGGCGCTATGGAGGCGGCGCTGCTGGGGCTGTGTAACTGGAGCACGCT  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  GGGCGTGTGCGCCGCGCTGAAGCTGCCGCAGATCTCCGCTGTGCTAGCGGCGCGCAGCGCGCGGGGCCTCAGCC  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  TTCCGAGTTTACTTCTGGAGCTGGCAGGATTCCTGGTGTTTCTGCGGTACCAGTGTTACTATGGGTATCCGCCG  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  CTGACCTACCTGGAGTACCCCATCCTCATCGCGCAAGATGTCATCCTCCTGCTCTGTATCTTTCATTTTAACGG  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  GAACGTGAAGCAGGCCACTCCTTACATCGCTGTATTGGTGTCTTCTTGGTTCATCCTTGCCCTGCAGAAGTGGA  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  TCATAGACCTGGCCATGAATCTATGTACTTTCATCAGCGCGGCCAGTAAGTTTGCACAGCTCCAGTGTCTGTGG  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  AAGACGAGAGACTCAGGAACTGTGAGTGCGCTGACTTGGAGCCTCTCTTCCTATACCTGTGCAAGGTCTCGCTC  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  TCTCTCACAGGCTGGAGTGCAGTGATACGATCTTCACTCACTGCGGGTTTCCAAGTAGCTGGGAGTACGAGCAC  666

Query    1  -------------------------------------------------ATGGAGTCTCGCTCTGTTGCCCAGG  25
                                                             |...|||||||||||||..||||||
Sbjct  667  ACACCACCACACCTGGCTAATTTTTAATTATTATTATTATTATTTTGAGACACAGTCTCGCTCTGTCACCCAGG  740

Query   26  CTGGAGTGCAGTGGCCTG--ATCTCGGCTCACTGCAACCTCTGCCTCCCAGGTTCAAGCGATTCTTCTGCCTCA  97
            ||||||||||||||  ||  ||||||||||||||||||||||||||||.||||||||||||||||.||||||||
Sbjct  741  CTGGAGTGCAGTGG--TGCAATCTCGGCTCACTGCAACCTCTGCCTCCAAGGTTCAAGCGATTCTCCTGCCTCA  812

Query   98  GCCTCCAGAGTAGCTGGGACTATAGACATGCACCACCACGCCCGGCTAA-TTTTGTATTTTTGGTCGAGACGGG  170
            ||.|||.||||||||||||.||.||.||..|.||||||.|||.|||||| ||||||||||||.||.||||||.|
Sbjct  813  GCTTCCTGAGTAGCTGGGATTACAGGCACACGCCACCATGCCTGGCTAATTTTTGTATTTTTAGTAGAGACGAG  886

Query  171  GTTTTGCCATGTTAGTCAGGCTGGTCTTGAACTCCTGACCTCAAGTGATCCA-CCACCTCGGCCTCCCAAAGTG  243
            .|||..|||||||.|.|||||||||.|||||||||||||||||||||||||| ||.|||.||||||||||||||
Sbjct  887  TTTTCACCATGTTGGCCAGGCTGGTTTTGAACTCCTGACCTCAAGTGATCCACCCGCCTTGGCCTCCCAAAGTG  960

Query  244  TTGAGA--------------------------------------------------------------------  249
            .|..||                                                                    
Sbjct  961  CTAGGATTACAGGCATGAGCCACCGCGCCCAGCCAATTTTTTGTAGAGAGGGGTCTCACTATGTTGCCAAGGCT  1034

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 1035  GGTCTCAAACTACTGGGCTCAAGTGTTCATCTCACCTCAGCCTCCCAAAGTATTGGGATTACAGGTGTGAGCCA  1108

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 1109  CTGCACCTGGCCCTGTATGTTTTCTTTGGAGAAATGTCTGTTCACATGGTTTGCCCATTTTTTAATTGGGTCAT  1182

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 1183  TTGAGTTTCTTACATATTCTGGTCATTAACCCTTGTCAGATGTGTGGTTATTAACAGCCTTTTAAAAAGTTTGT  1256

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 1257  CTGAGAGTCCTTTGTTGGCCGCCTTCCTAACTGAAGTCTTCTGTCTACTTATATGATTGAATTCTTTTATTTAA  1330

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 1331  ATGATGATTTAATCAACAACTATTTATGTGGTGTCTGTGTGTAAAGTCTTGGTTTATCAAATGTGTCAACAAAA  1404

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 1405  CATTTTATAGGATTTGGCCTCTGCCCTTCAGGGGCTTGCAGTTTAGTTGGAAGGTAGACCAAAAAACTTCTATG  1478

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 1479  TCAATATGTGCTAAATGCAGAATGTGTTAGCAGAGAGTTTTGACAGGCTGGTTTTGGGCTAGGAAAGGCATGCC  1552

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 1553  TTGAGCTGCAGGCAGTGGTCTTCTCTAACTCCCAAGTCACGCCACTCCCTGCTCTTGTGTGTCGGTTTAAACTG  1626

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 1627  TTACTCCAATTTCCTAAATGTTTACTAAGTAAAGGGCTATGGCACACAAATAAACTAAACAAAATAGTTCTAGT  1700

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 1701  TAGACCCTTGGAAAAATCTTCCCCTTTTCTGGGCCTCAGTCTGTTTATCTATAAAATGCAAGGATAGAAACCAG  1774

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 1775  TGATTCGAAAACATTTATTGTTTGTTTTTTGAGACAGAGTTTCGCTCTTTCGCTTAGGCTGGAGTGTAGTGGCA  1848

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 1849  TGATCTCGGCTCACTGCAACCTCAGCCTTCCGGTTTCAAGCGATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGG  1922

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 1923  ATTATTACAGGTGCCCGCCACCACACCCAGCTAATTTTTGTATTTTTAATAGAGACAGGGTCTCACCATGTTGG  1996

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 1997  TCAGGCTGGTCTCGAACTTCTGACCTCATGATCCACCCGCCTCAGCCTCCCGAAATGCTGGGATTACAGGCGTG  2070

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2071  AGCCACTGTGCCTGGCCAAAACATTGTTTTTAATTAGTGGGAGCCTTTCTTTAAATAAAACTACCCAGATGCTC  2144

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2145  AATTTGTAAATGAGAGTTGCTTTTGGAGGGTTGGGGGTTGCAGGTTAGCACAGAGACAGTGGAAGGGAGCTCAG  2218

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2219  TCTCTCCGGCCTTCCGCAGGCAGCGCTCGAGTACCTTCTAGGTACCTTCCCTCATGAGCAGTTTCAAAACCATT  2292

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2293  GGGCCATTGGGGTAGGATGCATGGCTGTTTTTTGTTTTGTTTTGTTTTGTTTTTGAGACGGAGTCTGGCTCTGT  2366

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2367  CACCCAGGCTGGAGTCAATTGGCGCAATCTCAGCTCACTGCAACCTTTGCCTCCCAGGTTCAAGCGATTATCTT  2440

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2441  GCCGCAGCCTCCTGAGTAGCTGGGATTACAGGCGCCCGCCACTACACCTGGCTAATTTTTGTATTTTCAGTAGA  2514

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2515  GACAGACAGGGTTTTGCCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAGGTGATCCGGCATGGCTAGTT  2588

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2589  TTTATGTAATTATGAAATACAGCACTATTTGGTTTTCTGTACTACCAAACTCTGTCAAGAATAGTTAATATATG  2662

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2663  TTGTTAAAAAAAGAATAAAAATAATTTAAAAATAATGGTTAATATATATTGGGATATTAAAAGGGAAAGACATT  2736

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2737  ATTAGCTAAGCCCCAAAATGTCCGAGAGGCAAGTTACTTATTGCTGCAAGTTTTCTTTTACAGCAAGAATAATC  2810

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2811  ACAACCTTAATGACCACCAATGATTTTACAATTCTTCTACGTTTTGTGATCATGCTGGCTTTAAATATATGGGT  2884

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2885  AACAGTGACAGTACTTCGCTACCGGAAGACCGCTATAAAGGCTGAATGATGGATACATTATTCCTTCACACAGT  2958

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2959  GGATTTTGAGTAACTGAACCAAAGGAAAAAGAAGCTCTTTGCTAAATTAAGGTCTTTTATAAATTTAGTAAATC  3032

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 3033  AGTTTATAATCTTTAAAGCCAAAGGTTTTTTTAGACTTGAAAGAAAGAGCCACTTAAATTCTTGTTTAAAAATA  3106

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 3107  CCAATTTGCCTCCTCCTTCCTCACTTCGTTAGGTTATGGTAGTGCTCAGACATCTGCAGTGTTGAGGCCAGTCA  3180

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 3181  CTGTTGGAAGTCATCCAAGAAGCCCATTTTGAGGCCATTTTGAGCCTTACTCTTAAGTTCTCTATGAAGAACTA  3254

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 3255  CATTGATTTGTTGGCTTTCAGAATCTTTTAGGAAATAAATCCTCTCCAGGACAAAAATGAACATGAATGGAGTG  3328

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 3329  GCATTTTGTTCCAAGTCAGAGGTGGGCACCTATAATAAATGACTAGGGTTCACTTTCTGGGACTGATGTTTAAT  3402

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 3403  TGTAACACAGATACAACAGGGTGGCCTTGTTGTGTATAATACGGTATTATACCCGCATGTGCTCTAGCAAGGAT  3476

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 3477  ACCAAGGCAAGCATACATGTAGCTGGCTTGAGTTTGTACCAAAACAGTCCTTCAACTTTGCACTGTGCCTTAAG  3550

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 3551  TAATTACTAACAAAAGGTACTAGGATTAGCTGCAATCTCTACTTTCGATGAGGAAATCCCAGTAAGCTTTCTGA  3624

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 3625  TTCAAGTACAATGCTGCCATTTTTTAAAGGGCCACAACTATAGAATTACCACTGTTGGAATTTGGTACAAAATA  3698

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 3699  TGTTTTGTCTATTGAAAACATACACGGTAAATGGTGTTGTTAGGTAGGTTCTGTCCAGTTCTTAGGGACTTTTT  3772

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 3773  TCACATTATAGCATTTTTACCCTAAACATGATGTTGAGATTATTATATACTGTATTTTCTTCTAAATTAACCCT  3846

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 3847  AATGTTTAAAAACTCACTTTCCCCCTTTAATTGAAGGCATTGTTTTGTTAGATGCAGTAATGATGTTTACCAGA  3920

Query  250  ----------------------------------------------  249
                                                          
Sbjct 3921  GATTATTGTTTCCTATGCAAAATAAATTTTCATATTTTGAATTCTG  3966

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