Nucleotide Global Alignment

Description

Query:
ccsbBroad304_10792
Subject:
XR_001739972.2
Aligned Length:
2821
Identities:
217
Gaps:
2574

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  TTTAGTTTGTAACTCTAATACAGCTTTCGTTTTTGTGGGGTTTTTTTCACTATGAAAGTTTCCAAACATACACT  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  AAACCCTTGTACCTGTCACCCAGCTTCAGCACCTGCCAGCATTTTGCCCAAAGCACTTCCATCTTTTCCTCCCC  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  CACTTCTGCGGGAATACACGTAAGCAAATTCCAGACATATTGTCACTTGCCCCTAAATCCTTTGGTAGGCATCA  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  CAAAACAACACAAAGCCATTTTCTTTCTCTTAACTCGTTGCCATATCAGAAGTCTCACCAGGCACATGGAGACG  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  AGGCTACACGGGTGTTGGGAAGCAGAGTCAGAATAGGTAGCACACAGGCTGCGCAGGGTTAACATCCAGGGTAG  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  CAACCGCAGGTACCACCTCCAGGGCTTGGGGACAAAAAGTATTACCAGGGTGGGGTTTCAGGGACCTCAGAGCT  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  TACAGGATGTGCTTGGTTCTCGCAAGAGGGGCAGGAGGGCCTAGGACTGTACTCCAGGAGCCAAGGGGGCACCA  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  AGGGACCTGGTGGCTGGGCTCAGAGCTGTCTCTGCTCCCAAAGTGATGCTGAAATAACCTGGGAACACCAGGGA  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  GGTCCCAGCCCCAACTCCTGCATCCAGGGCTCCAGCACACCCAGCTGGAAGGGTGTGTGGAAGGGCAGCACTCA  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  GGGCAGAGCACAGACAAGCCAAGAGACAAGAAGTCAATAACTGACGGCACAGTGCTGTTTTCACAAAATGCATA  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  AGAATTCTGTAATGTTCTCTAACAGTCCTATTCGTATTTCCCTTACTGCCTAAGAAATATCCTCACACGATTGG  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  ATTATCAAAGCTTTATTCACGTTTGTGTTTGGCTACAAAGTCTTTTAGGATCCTTTTGATCCTAAAAGTCCCCC  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  TCTTCCCTCCCCTGTGCCCTTGACTTGTTGGTGAAGCTGGTCACTTGTCCTCGAAGGTGTCCCCAGTCTGGACT  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  TAGCATCCTCCTTGTAGTGTTTAACTTGTTCCTCTGTCCCCTCTATATCCTGTCGTCTGGAAGTTGGATCTAAA  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  GTTGTGGCTGGAATCACACCCGGACGGTGCTCAGTTCCTCGTGTCACAGCCTCATGTCCAATTGTGTCACTTTG  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  TTGAAGCATTAATAAGCTTGGATGGCGACAGCCTGACCCCTTTATCGTCAGTTTCCCCTCAACTGTTCCCCTGA  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  CAGTTTTGCCACCTGTGGGTGACCATTGCTAGAACCAGAACCTTCACTGGGACTGCAGAATTCTCGTCTTCTGT  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  CTCATCAGAAGGACATTTAGTGGCTGGAATTCTCTCAGACCTTCCCTTTATCCATTAGGGTAAGTCAGGTTACC  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  CTGAAGTGCGTTCATACTAGAAAGGCAGCATAAGCACTTAATTATTTCCCTTTAATGATCAATTTTTGGAGTAA  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  GAATGTCCTGGCACCCTCCAGTGGTGCCAAAGGACTGGGAGTTCCTCACACCACTGCACTTACCCTTCCCGCTT  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  CCCTACTCATGTTACGAGCTTAATGCTTTCATGTATACAGTCTGTCCTCAGTATCCACAGGGGTGCGTTACAGG  1554

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1555  ACCCACACGGGTACCAAAATCAGATGCTCGAGTCTCTTGTATAAAATGGCATGGGATTTGCATGCAACTTATGC  1628

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1629  ACATTCTCACATATACCTTAAGTCATCTCTAGATTGCTTATAATACCTGATACAGTGTAAATGCTCTGTACGCA  1702

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1703  GTTGTTATACTGTATATTTTTGGGGTTTTTTATTGTGGGCTTTTGGGGAATATTTTTATTTTTATTTATTTATT  1776

Query    1  -------------------ATGGAGTCTCGCTCTGTTGCCCAGGCTGGAGTGCAGTGGCCTGATCTCGGCTCAC  55
                               ||||||||||||||||||||||||||||.||||||||||...|||||||||||||
Sbjct 1777  TATTTATTTATTTTTTGAGATGGAGTCTCGCTCTGTTGCCCAGGCTGAAGTGCAGTGGTGCGATCTCGGCTCAC  1850

Query   56  TGCAACCTCTGCCTCCCAGGTTCAAGCGATTCTTCTGCCTCAGCCTCCAGAGTAGCTGGGACTATAGACATGCA  129
            |||||.|||||||||||.||||||.||.|||||.||||||||||||||.|||||||||||||||.||.|...|.
Sbjct 1851  TGCAAGCTCTGCCTCCCGGGTTCATGCCATTCTACTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCG  1924

Query  130  CCACCACGCCCGGCTAA--TTTTGTATTTTTGGTCGAGACGGGGTTTTGCCATGTTAGTCAGGCTGGTCTTGAA  201
            |||||||.||.||||||  ||||||||||||.||.||||||||.|||..|||||||||.|||||||||||.||.
Sbjct 1925  CCACCACACCTGGCTAATTTTTTGTATTTTTAGTAGAGACGGGATTTCACCATGTTAGCCAGGCTGGTCTCGAT  1998

Query  202  CTCCTGACCTCAAGTGATCCA-CCACCTCGGCCTCCCAAAGTGTTGAGA-------------------------  249
            |||||||||||  |||||||| |||||||.|||||||||||||.|..||                         
Sbjct 1999  CTCCTGACCTC--GTGATCCACCCACCTCAGCCTCCCAAAGTGCTAGGATTACAGGTGTGAGCCACCATGCCCG  2070

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2071  GCCAGGAATATTTTTTATACACAGTTGAATCCACAGAAATGGAGGGCCAACTGTATTTGATATCATTTTAATCA  2144

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2145  AGTGCTGCGTATATCTTTGGCAAACAGGAGATGCTCAGATTATCTCGTAATTGGACAGAGGAGCCCCTCCATCC  2218

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2219  AGTGGGCTTTGATGCCTCCTTGCTCTGGGGCCACAGCTGCCTCTGACTTTTCCTGCCCAGAACCTGGAACTACC  2292

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2293  CATTTCTCCAGAGCCCTGGTTCTCGTTAGTGGGGAGTGGGAATTGGAGGGAGTGGGAATTGGAGGCCACAGACT  2366

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2367  GAGCACTGACTGCTTATGATGGCTGGGCTGCTCTACCTCCCAGCCTTTCCATGGACAAAACCAGAAAATTGTTC  2440

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2441  TAAAATTTATTTTCTCAGCTAGGCGCGGTGGCTCATGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGTGGATG  2514

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2515  GATCACCTGAGGCCCTCAATATGCATTCCCACGGTCCTGGGATTTCTATGTAAACTGGAAAACTCACGTTCTCT  2588

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2589  TTGACACCGTGAGGCTGGGAGTTCCACATGTGCTATAATCCAGCCACTGGAAGGGCGAGATTCTGGGTTTGATT  2662

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2663  TTCAGTAGTCTCAGACCCGCAGCTAAAGGAGGTAAGAGTCTCTCTTGGGACAGTCATAACTTTCAGATTATTCA  2736

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2737  TGTGACACTTCAGCTGGGAATCTGAATCCTGAGCTCACTCCCATGATACTTTTTCTGAGATGGAGTCTCACTCT  2810

Query  250  ---------  249
                     
Sbjct 2811  GTAGCCCAG  2819

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