Nucleotide Global Alignment

Description

Query:
ccsbBroad304_10792
Subject:
XR_001744731.2
Aligned Length:
3350
Identities:
215
Gaps:
3105

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  TTTTTTTTCCGAACGCCCGCAGCAGGGTCAGAAGGGAGGTGGTCGCCCTCCGTCGTGGTCTGGCGTGTATTCCG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  AGCCTTGGTGTCTGGCGGTTTCCGAGCGTTGGTGTCTGGCGGTTTCCGAGCGTTGGTGTCTTGGCGGTTTCCGA  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  CCGTTGGTGTCTGGCGGTTTCCGACCGTTGGTGTCTGGCACGCGCCACCCTCTCTTGCTTTGGTTGCGCCATGC  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  CGATGTACCAGACAAGAAGACAAGAAAATGATTTGAGGACAGCTTCAATCGCGGTGTGAAGAAGAAAGCAGCAA  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  AACGACCACTGAAAACAACGCCGGTGGCAAAATATCCAAAGAAAGGGTCCCAAGCGGTACATCGTCATAGCCGG  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  AAACAGTCAGAGCCACCAGCCAATGATCTTTTCAATGCTGCGAAAGCTGCCAAAAGTGACATGCAGGGATGTCC  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  TTCCTGAGATCCGTGCTATCTGCATTGAGGAAATTGGGTGTTGGATGCAAAGCTACAGCACGTCTTTCCTCACC  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  GACAGCTATTTAAAATATATTGGTTGGACTCTGCATGATAAGCACCGAGAAGTCCGCGTGAAGTGCGTGAAGGC  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  TCTGAAAGGGCTGTACGGTAACCGGGACCTGACCGCACGCCTGGAGCTCTTCACTGGCCGCTTCAAGGACTGGA  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  TGGTTTCCATGATCATGGACAGAGAGTACAGTGTGGCAGTGGAGGCCGTCAGATTACTGATACTTATCCTTAAA  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  CTTTTCTACCCTGAGTGCGAGATAAGAACGATGGGTGGAAGAGAGCAACGCCAGAGCCCAGGTGCCCAGAGGAC  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  TTTCTTCCAGCTTCTGCTGTCCTTCTTTGTGGAGAGCAAGCAAATCGCAGTCTTCTCCAGGCTGACAAGGCGAA  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  GGGCATGGCTTCGAAGTGCAAAAGAGTCATCATGAAACATCATGAATCATGAATCATTAGGCGTCTTCCCTTCG  962

Query    1  -----------------------------ATGGAGTCTCGCTCTGTTGCCCAGGCTGGAGTGCAGTGGCCTGAT  45
                                         |..|||||||||||||||||||||||||||||.||||||...|||
Sbjct  963  CTCCCCACTTTTTTTTTTTTTTTTTTGAGACTGAGTCTCGCTCTGTTGCCCAGGCTGGAGTACAGTGGTGCGAT  1036

Query   46  CTCGGCTCACTGCAACCTCTGCCTCCCAGGTTCAAGCGATTCTTCTGCCTCAGCCTCCAGAGTAGCTGGGACTA  119
            ||.|||||||||||||||||||||||..|||||||||||||||.|||||..|||||||.||||||||||||.| 
Sbjct 1037  CTTGGCTCACTGCAACCTCTGCCTCCTGGGTTCAAGCGATTCTCCTGCCGTAGCCTCCTGAGTAGCTGGGATT-  1109

Query  120  TAGACATG----CACCACCACGCCCGGCTAATTT-------------TGTATTTTTGGTCGAGACGGGGTTTTG  176
               |||.|    |.|||||||.||.|||||||||             |.|||||||.||.||||.|||||||||
Sbjct 1110  ---ACAGGTCCCCGCCACCACACCTGGCTAATTTTCTTATTTATTTATTTATTTTTAGTAGAGATGGGGTTTTG  1180

Query  177  CCATGTTAGTCAGGCTGGTCTTGAACTCCTGACCTCAAGTGATCCACC-ACCTCGGCCTCCCAAAGTGTTGAGA  249
            |||||||.|.|||||||||||.|||||||||||||||||||||||||| .|.|.||||||||||||||.||.||
Sbjct 1181  CCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAGTGATCCACCTGCTTTGGCCTCCCAAAGTGCTGGGA  1254

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 1255  TTACAGGCGTAAGCCATTGCACCCAACTCACTCCCCACCTTAAAACCAAAAGCGCTCTGGCTCTCAATGGAGAC  1328

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 1329  ATCAAGCCCTCCCTGCCCCTTCTCCCTCCCCTTTCAGAGAATCTCCAGGAATTTCTGCCATTGTGCAGGGAGCA  1402

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 1403  ATTGAAAAATCAGTTAGTTCAGCTGGGTGCAGTGGCTCATGTCTGTAATCCCAGCACTTTGGGAGGCTGAGGCG  1476

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 1477  GGCAGATCACCTGAGGCCAGGAGTTGGAGACCAGCCTGGCCAGCACAGTGAAACCCCGTCTCTACTAAAAATAC  1550

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 1551  AAAAAATTAGCCGGGCGTGGTGATGGGCACCTGTAATCCCAGCTACTCTGGAGGCTGAGGCAGGAGAATGGCGT  1624

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 1625  GAACCTGGGAGGTGGAGCTTGCAGTGAGCCGAGACTGCAGCATTGCACTCCAGCCTGCGCAACAAGAGTGAAAC  1698

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 1699  TGTCTCAAAAAACAAAACAAAACAAAACACAAAAAGAAAGAAAAAAGGAAAAATCAGTTAGTTCGATTATTAGA  1772

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 1773  AGACTAGATTATTGCTCAGCAGTAACCACTCCTTTCCCACAAACTCCCCTCTCTAGGAGGAATGTACCTCCCCA  1846

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 1847  CCCATTCCTGTTAGGCTTGGCCAGGTGAATCGCTTTGGCCAATAGAATGTAACTGACAAGGTGAGCAGAGATTT  1920

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 1921  GCAGTGGGCTTGTGCTTGGTGCTGGTCCTCCGGGGCTCCTGCCTTTAGCCAGGGGAAGCACACTCCCCAGCCCC  1994

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 1995  TCCTTAGCCCTCTGGCCCTGGGGAGAATGAGAGGCATGTGGCACAGTCCTGGACCCAGCCGTGGCTGGGAGCAA  2068

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2069  GCCTGGAAGCTTGAGCGAGAGATAAATGCTTGGTCTTTTTGTTTGAGACTAAGTCTCGCTCTATCGCCCAGGCT  2142

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2143  GGAGTGCAGTGTGGCACAATCTCAGCTCATTGCAACCTCCACCTCCCAGGTTCAAGCTATTCTCCTGCTTCAGC  2216

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2217  CTCCCAAGTAGCTGGGACTACAGCCAAATTGGAAGACCCACTTCTCTGGACTGGATGCTGCATTGAATTGAGCA  2290

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2291  AAGGAACTGAGTGCCCGGGGAGCTCAAAGGGAAGCAGCCCAGCCTTCCTTCCGGGGCAGAGCAGTGGTGGGGAC  2364

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2365  CTGTTTCCAGCTGCTTGTGCCCCCCACTTCATGGAGGAGGGACCAGGGATCCTCAGAGGAGAGGAATCGGCTCC  2438

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2439  CAGACACCTGCCACTCGTGAATGCATCTGATAAACTCACTCACACTGAGGCCTTGGGGACTGAGAGTGCGATGA  2512

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2513  CATGGATCCTGCGGACAAACCGCCCCAGGGCGTACCTAGCACCGAAGCATCAGGCGCCACTAGGTCTCCAGCTC  2586

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2587  CTTCTCGGATGACGTCCTTCAGCACGCCCCGGTCCCCCGAGATGTCCAGCATCCTCTGACTTAACCGCTCGTAC  2660

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2661  AGGGACTGATGGAGAATGAAAGCCAGGCCTCAGAGCCGCAGACCCACCCGGCCACCCCTCAGCGTCTACGCCCC  2734

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2735  CACGTCTGGGCCCTCACCTGGCCGGGGGCGTCGTCCCCTTCCAGGACTCCCTGGTTTAACGCGCTTCCCCCCAT  2808

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2809  GTCCTAGCTGCCCTCCCTGTGGCGTGAGCCTTCGGCCTGGTGCGCCCCGCTGCCCTTCCTGGCTGTGACTCTGG  2882

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2883  TGGGGTTCCGAAGGCCCCTTTATGCCCGGCAGACCCCTACCGACGGCGGCATTCCATTCTGGGGCCACGAGGAG  2956

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2957  GCACTCATCGTTTCGTTCCAACCGCCGCCAACGGCCCTGGCCCTCGCGAGCTCTGGAACTACAGAGGTCGCACG  3030

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 3031  GTGAGTTGCCAGGTGTGGCCCGTAATCGGAGCGCACAAAACATGATGGGACACGTAACGGGACCACACAGGGCA  3104

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 3105  CATTGGGCACTTGCAGGGGCGCGAGGTGGCGGCACGTAATGGGAGCGCGCTGAGCATGATGGGGCATGTGCGGG  3178

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 3179  AGCGCCAGGCGGGGCATGTAACCAGAGCGTGCGGGGCATGATGGGGCACGGACATGGGGGGTTAGGTGGGGCAC  3252

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 3253  GTAATTGGAGCTCGCGGGGCAGGATGGGGCATCTAACTGGAGCGACAGAGAGCACGATGGGGCACTTACAGGGG  3326

Query  250  --------------------  249
                                
Sbjct 3327  CCGGAGGCTGGGTACGTAAT  3346

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