Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_10792
- Subject:
- XR_001748204.2
- Aligned Length:
- 3825
- Identities:
- 216
- Gaps:
- 3578
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 TGAGCCACTGCACCCAGCGTCTCTGCTTCTAATACTCAGCTTTTCTCCTCCGTTAATGATCATCACTTCCCAAG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 AAGAGATCAGTGGAAATTTCCTGCAGCCACTGTGTTTATGAGTGGTGCATGCATGTGATTGGGCACACATTGGC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CCACTTTTTCTCTCTTTCTTTTCTCTTTCCTCTCTTTTTTCTTTTACTCATACCCATCCCATCTCTTCATCCAA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GCAGAGCTGTGGATCACACCGCTGTAGTACCCCAGCCTCTCTACTGCTCCCAGAGCACATCCACACACTTTGAA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CCCTGACCTTGAAGCTCTGATTCCTGAGTCCTAGTTGAAAGGGCCTCGCAACAACCCATGAGATCGGTGATGAC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TGCCCCCATTTGCCAGCTTTGCAGGGAGAGGTCAAGACCAAGACGATCTTCAGGCCCAAGGGAGGCAGGGAGGA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GGCTTGCAAAGCCCACCCCTGGGAAGAGGTGAGGACCAGACCCTTTTGGAAGCCTCCTCAGGCAAGGTGTCTAT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GCATGCTGTCTCACTTCATCCTTGAGCAGCTCTGGGAGGAAGGTACAGTTACCCTTGCTTTACAGAGGAGGAAG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 CTGAGGCTTGAGCTGGAGCTCAGAAATGGGGCTGGAGTTCCTCATCATTATCTCAACTACCCTTGCCTGCTGGC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CTGGAGGATGAGGCTGGGACTGAATTCTGGGCTTGGCCTGTCTCCACTGAGTCTGGCTGGCCGCCCTGCCTGTT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GGCAGCTTGGAGTGTGGGTGTCGAGCTGGGCATCTGGTGGGCTGGCTGGAGCTGGAAGACCCTGGGAAAGATGA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 GGCCTCGCAACAACCCACGAGATCTGTGATGACTGCCCCCATTTGCCAGATGAGAAGCTGAGGCTCGGAGATAT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 TGAGGAATCTGTCGAGCGTGTTGCTCCACAGAGCTGACAGCTTCCCACAGTGTGTGAGATGTGCCACAGCCAGG 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 GGAGATCTCAGGAAAAAGAGGCCCTCTTCAGGAGTGAAGCTGCTTATGTGGATTTCCTGACAGTGTGGACTAAT 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 TGTCTTATCTTCCACTCTCTACACTAAGAGTATTTACACAGGAATGACGCAGAGGCTTTTACCTCTGCAAGCCA 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 ATTCCCAGGGCTGAAAGCCCACCTGAAATTCCCATCCCCCATCAATGATGCCACGATGGTTTCCAGAGCAACCA 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 CGAGGGATGGCATGGTATGGGGGAGGGAACAGTGGAGATCAGGAGGACAGGAGCCCTCCTCAGTGTGAGCCCTT 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 CCCCAGCTCCCCCTGCATCGGGAGCCAGGTGGGAGGGAGGCAGGAAGGGTGTGTGCCTTGATGTTCTGGGCAAC 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 AACCCCACTGTTTCTCCCCTTTTCTCAGTATCGGGATTGAATGTTTTTGTGATGCAGTCTGCACAATGGCCAGG 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 CACTTATAACACTCAGAGAACATGGGTGGTTTCTGCATCATTTATTCTTTTCTTTTTTATCTCCAATGTCCCAT 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 ACCATTCAAGTATTTGTGCACCCAGTCTTTTCCGTATGCTAGGCACTGGGGACTCAGAGGTGAAGAGATCAGAG 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 GTGGCTCCTGCTCCCGCTGAGTTTACAGTTAGAAGTGGAGATGAAACAAATACCCTGACATGTGCCGTCCTACC 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 TTCACTCAAGACAAGGGCAAGGGAAGAGAAATTAGGGAGCAGAGGGAAGATTTTATAAGAGAACCTAATCTAGT 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 CTGGGGATTTTGAGAAAGCTTCCTGATGGAGGTGACATTTACATTGAGACTGGAAATGTGAGCAGGAACTGGCC 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 AGATGAGATGTGAGATGGGGAGGTGAGGGTTCCAGGCTGAAAGGACTGTGCAGAGGCCCAGTGGCAGGAAGGCA 1850
Query 1 -----------------------------------------------------------ATG----GAGTCTCG 11
.|| ||||||||
Sbjct 1851 AACCTGGGGAGATCTCAAAGATTGTCTTGACCTACTGTCTTTCCTACTTTTTTTTTTTTTTGAGACGAGTCTCG 1924
Query 12 CTCTGTTGCCCAGGCTGGAGTGCAGTGGCCTGATCTCGGCTCACTGCAACCTCTGCCTCCCAGGTTCAAGCGAT 85
||||.|.|||.||||||||||||||||||.|||||||.|||||||||||.||||||||||||||||||..|.||
Sbjct 1925 CTCTTTCGCCTAGGCTGGAGTGCAGTGGCGTGATCTCAGCTCACTGCAAGCTCTGCCTCCCAGGTTCACACCAT 1998
Query 86 TCTTCTGCCTCAGCCTCCAGAGTAGCTGGGACTATAGACATGCACCACCACGCCCGGCTAA--TTTTGTATTTT 157
|||.||||||||||||||..||||||||||||||.||.||..||||||..||||||||||| |||||||||||
Sbjct 1999 TCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCACCCACCACTGCGCCCGGCTAATTTTTTGTATTTT 2072
Query 158 TGGTCGAGACGGGGTTTTGCCATGTTAGTCAGGCTGGTCTTGAACTCCTGACCTCAAGTGATCCA-CCACCTCG 230
|.|..|||||.||||||..|||||||||.||||.||||||.||.||||||||||| |||||||| ||||||||
Sbjct 2073 TAGCAGAGACAGGGTTTCACCATGTTAGCCAGGATGGTCTCGATCTCCTGACCTC--GTGATCCACCCACCTCG 2144
Query 231 GCCTCCCAAAGTGTTGAGA------------------------------------------------------- 249
|||||||||||||.||.||
Sbjct 2145 GCCTCCCAAAGTGCTGGGATTACAGGCATGAGCCACCGTGCCCGGCCTCCTACTTTATAGATGAAAAATCTGAG 2218
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2219 GACAGTGACTTGTTCAAGGTCACACAGAGAATGAGGAACTGGACTGGGATTGATCCTGGGGGCCATTCCCTGTC 2292
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2293 TTCTAGCTCTTTCTCTGGTTCCATCAGGCCTACCAGTTCCAAACTTCTCCCAATTTCTTTCTTGGATCACAAGT 2366
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2367 GATATATCTGACTTCTCTCCCTCAACCCTCAGCACTGAAGGCACTGACTTGGATGTGGGTCACTGGGGAATGTT 2440
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2441 CTTCAGGTGGGAGGCAAGAGAGGAGAAGCCTTTATGTTTGAATGGGTGCTGCCATGACCAGGCACATCCCCCAG 2514
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2515 GCTGATGGTGGCATGCGAAGCGGAGCAGGGCATGGGTGAGTCACCTCCTCACCAGCATCTGAGCCAATACCTCC 2588
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2589 TTGTCCATGGCTCTGCTGTGGCCCTGGTGTGGCCCAGGGACTCCAATGTCCATTTCCTTCAGAGAGGCGAGTGG 2662
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2663 AACCTTCTGGTTGGAGGCCTTGTCAGAGCAGCCCTGATAGACTTGGGGATCCCAGAGGCTAAAGGGAGCCCTGG 2736
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2737 CAAACAACAGACCCAGCTTGGAGTCATGGAGCCTCTCCAAAGGTTCTGCTGGATCTTAGGCATCTTCTGGTCCT 2810
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2811 CCCTTCCTGCTCTAATGATGAGGAACTTGAGTCCAGAGAAGGGAAGGGATGTTATTCAAGTCCACACAGGGACT 2884
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2885 CAGAGGCAGAGCTGGTGTCCTGCACCTTACTCCAAGGCTCTCAGCAGCTTTGAAGCAGAGGACTATGGGAGGCC 2958
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2959 TTGAAGACTCCATTATGCGTGGTGCTGACAGCAATGTCACCTTCCCTCAACACCTGCAGTACCAGGCAGGCTAG 3032
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3033 CAGCCATTCGGTCAGATTCTGATCTGCCCTGGAAGTACATAAGATACTACCAAAAATAAGAGTTAGAACCTAGG 3106
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3107 GGATAGGCCCGTGGGCAGCATCCTCACCCTTTCTCCACCGATGCAAATCTTACCCAGGGACAAGATGGCATGGG 3180
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3181 GTCACCAGCTGTGGGTCCCCCCTGGGTAAATCACTTAGCCTCAGTTTCCCCAACTCTAAAATGGGGATACTGAC 3254
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3255 CCATATTTCATGGTGTGGCTCTGAAATGAAATGAAACGTGAGCTTCCTTCTCTCCCCAGCCACCATTTGGTCTA 3328
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3329 TAGCTAGCAATGCCTTTCTCTTTCTCTTTCTCTTCCTCTCCCTCTGCCTCTCTCTTTCTCTCCTCGTGATGGTT 3402
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3403 AATTTTATGTGTCAACTTGACTGGACCACAGGGTGCCCAGGCATTTGGTCAGACATTATTCTGGATACGTCTGC 3476
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3477 GAGGGTGGTTCAGGAGGAGATTAATATTTGAATGGGTAGACTGAATAGAGAAGATTGTCCTCCCCAATGCGAAT 3550
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3551 GGGCCTCATCCAATCAATTGAAGACCTGAGTAGAACAAAAGGGCTGAATAAGAGGGAACTCCTGCTGCCTGATG 3624
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3625 GCCTTGAATGGGGACATCTGTCTTTTCTTGCCTTTGGACTTGAACAGAAACATCAGCTCTTCTTTGGTCTTCAG 3698
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3699 CCTACTGGCTTTGAACTACACCATCGGCTCTATTAGGTCTTCAGCTTGCTGACTGCGGCGAATCTTGGGACTTC 3772
Query 250 --------------------------------------------------- 249
Sbjct 3773 TCAGCCTCCATAATTGTGTGAGCTGATTCCTTATAATAAAATTTTCTCTCT 3823