Nucleotide Global Alignment

Description

Query:
ccsbBroad304_10792
Subject:
XR_001755169.2
Aligned Length:
2528
Identities:
193
Gaps:
2312

Alignment

Query    1  ATGGAGTCTCGCTCTGTTGCCCAGGCTGGAGTGCAGTGGCCTGATCTCGGCTCACTGCAACCTCTGCCTCCCAG  74
                                         |||||||||||..||.||.||||||||||||||||.||.||||||
Sbjct    1  -----------------------------AGTGCAGTGGCAGGAACTTGGCTCACTGCAACCTCCGCTTCCCAG  45

Query   75  GTTCAAGCGATTCTTCTGCCTCAGCCTCCAGAGTAGCTGGGACTATAGACATGCAC--CACCACGCCCGGCTAA  146
            |||||||.||||||.|||||||||||||||||||||||||||.||.||.|  ||||  ||||||.||.||||||
Sbjct   46  GTTCAAGTGATTCTCCTGCCTCAGCCTCCAGAGTAGCTGGGATTACAGGC--GCACGTCACCACACCTGGCTAA  117

Query  147  -TTTTGTATTTTTGGTCGAGACGGGGTTTTGCCATGTTAGTCAGGCTGGTCTTGAACTCCTGACCTCAAGTGAT  219
             ||||||||||||.||.||||||||||||..|||||||.|||||||||||||.||||||||||||||  |||||
Sbjct  118  TTTTTGTATTTTTAGTAGAGACGGGGTTTCTCCATGTTGGTCAGGCTGGTCTCGAACTCCTGACCTC--GTGAT  189

Query  220  CC-ACCACCTCGGCCTCCCAAAGTGTTGAGA-------------------------------------------  249
            || .||.||||||||||||||||||.||.||                                           
Sbjct  190  CCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGTGCCCGGCCGGGAGGTCACTTTAA  263

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct  264  GGAGGGCTGTCCAACTGCAAGGAGCCGCAAGCAGGAAGTGAAACCACAGCACTTCAAAAAAAGAGGGAGACTGG  337

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct  338  GACAAGCGTATCTAAGAGGCTGAACATGAATCCACAGATCAGAAATCCGATGGAGCGGATGTATCGAGACACAT  411

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct  412  TCTACGACAACTTTGAAAACGAACCCATCCTCTATGGTCGGAGCTACACTTGGCTGTGCTATGAAGTGAAAATA  485

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct  486  AAGAGGGGCCGCTCAAATCTCCTTTGGGACACAGGGGTCTTTCGAGGCCCGGTACTACCCAAACGTCAGTCGAA  559

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct  560  TCACAGGCAGGAGGTGTATTTCCGGTTTGAGAACCACGCAGAAATGTGCTTCTTATCTTGGTTCTGTGGCAACC  633

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct  634  GACTGCCTGCTAACAGGCGCTTCCAGATCACCTGGTTTGTATCATGGAACCCCTGCCTGCCCTGTGTGGTGAAG  707

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct  708  GTGACCAAATTCTTGGCTGAGCACCCCAATGTCACCCTGACCATCTCTGCCGCCCGCCTCTACTACTACCGGGA  781

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct  782  TAGAGATTGGCGGTGGGTGCTCCTCAGGCTGCATAAGGCAGGGGCCCGTGTGAAGATCATGGACTATGAAGGTG  855

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct  856  AGAGGTGCAGGGGTCAGGGGAGCATGACGGGGAGGAACAGCCTCAGAGATGGATGGATCTGCAATGCCATGGCT  929

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct  930  GGGGGTGTTCCAGGGCAGCCTGCAGGGGTGGGGCTGGCACTGATTGCAACTGACAGCCAGGAGACCAGGCCTGG  1003

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 1004  GAGGGCAGGCCCAGGGTCAGGGGAGAGCCTGAGTGCTTCCCACCTCTTCATCTCAGACTTTGCATACTGCTGGG  1077

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 1078  AAAACTTTGTGTGCAATGAAGGTCAGCCATTCATGCCTTGGTACAAATTCGATGACAATTATGCATCCCTGCAC  1151

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 1152  CGCACGCTAAAGGAGATTCTCAGGTGGATCCTGAGACCCATTGTCATGCAGAAAGGTGCTTCCTCTCTTGGTTC  1225

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 1226  TGTGACGACATACTGTCTCCTAACACAAACTACGAGGTCACCTGGTACACATCTTGGAGCCCTTGCCCAGAGTG  1299

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 1300  TGCAGGGGAGGTGGCCGAGTTCCTGGCCAGGCACAGCAACGTGAATCTCACCATCTTCACCGCCCGCCTCTGCT  1373

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 1374  ACTTCTGGGATACAGATTACCAGGAGGGGCTCTGCAGCCTGAGTCAGGAAGGGGCCTCCGTGAAGATCATGGGC  1447

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 1448  TACAAAGATTTTGTATCTTGTTGGAAAAACTTTGTGTACAGTGATGATGAGCCATTCAAGCCTTGGAAGGGACT  1521

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 1522  ACAAACCAACTTTCGACTTCTGAAAAGAAGGCTACGGGAGATTCTCCAGTGAGGGGTCTCCCTGGGCCTCATGG  1595

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 1596  TCTGTCTCTTCTAGCCTCCTGCTCATGCTGCACGGGCCTCCCCTCCATCCTGCACCAGCTGTGCTTTTGCCTGG  1669

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 1670  TCATCCTGAGCCCCTCCTGGCCTCAGGGCCATTCCATAGTGCCCCCCTGCCTCACCACCTCCTCCCCGCTCTCC  1743

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 1744  CAGGCTCTTCTTGTAGAGGCTCTCCATCCACCTCCCCAGTCCTGTTCCCCCAGCCTGGGTGCCCCTAACTTGAC  1817

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 1818  TCTTCCCATCTCCCCAGCATAACCAAATCTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTTTCACTCTGTCGC  1891

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 1892  CCAGACTAGAGTGCAATGGCTGGATCTCAGCTCACTGCAAACTCTGCTTACTGGGTTCAAGTGATTCTCCTGTC  1965

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 1966  TCAGCTTCTGAGTAGCTGGGATTACAGATGCCTGCCACCACGCCCAGCTAATTTTTTTTTTTTTTTTTTTTTTT  2039

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2040  TTTTGTATTTTTAGTAGTGACTGGGTTTCACCATGTTGGCCAGGCTGGTCTTGAACTCCTGACCTCAGGTGATC  2113

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2114  TGCCCATCTCTGTCTCCCAAAGTGCTGGGATTACGGGCGTGAGCCACCCGGCTCGGCCGCACAACCAAATCTTA  2187

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2188  TTAAACTCAATCTAGTCTGGCCCTGGTGACTCACGCCTTTCGGAGGCAGAGGTGGGAGAATCGCTTGAGCCCAG  2261

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2262  AAGTTTGAGACCAGCCTGGGCCACACGACAAAGCCCCATTTCTACAAAAAAAAATACCAAAAAAAAGCCAGATG  2335

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2336  TGGTGGCATGCACCTGTAGTTTAAGCTACTTGGGAGGATGAAGTGGGAGGACTGCTTGAGCCGGGGAGGTGGAG  2409

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2410  GCTGGAGTAAACTGAGATCGCGCCACAGAACTCCAGTTTGAGCAACAGATCAAGACCCTGCCTGAAAATAAATC  2483

Query  250  ------------  249
                        
Sbjct 2484  AATAAATACACT  2495

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