Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_10792
- Subject:
- XR_001755378.1
- Aligned Length:
- 6149
- Identities:
- 215
- Gaps:
- 5907
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 TACAAGTGTGAGCCATTGCTCCCGGCCCATATAGGATGGAGGTGAGCAATTTGGCAAGGAAGAAATTAAAAAGC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 ACATAAGAACAGTATCAAGACCATTGGAATCAGATGACTTCCTGTCCAAGATTCCCAGCTGTGTTTGTGCAAAT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 AAGACTTGATAGTAGTGGAAAACAGGGACAAGAAGAGACTGTCTCTTTCTTCTCAGGTAGATCCCCAAAACTGA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 AAGCCATTTTCAATCCTGCCACTTGCTCACTAAAGATTTAGGGTTTAGGTCCAAACCCTAAGTCTTGGATTCCT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TATCTTCTCAAACATGCTCTTGTTTGCTTGATGCCTGGTTCGAGTGGCCAAGGCCGACATTCATAGACGTTGGT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TAATCCCTAATTTCGCCAAACAATGACGGCCTAGGCTTTTCCGGCTTTTGAAACAGGAATTCAAGACACTAAAA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CGTGTGTTGATGGCATTTTGGGTTGGGGCTTTTCACAACTGATGACACTGGAAAAATAATCCATAGGAAACTAC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CTTATGAGACCCTAGATTTCGGTTTAGCAGTTCACCACAAAAGTGGTGAGGTGTTTTTTGGCTTTTAATTTTAG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 CTGCTTGCCTCTGTTTTTAGTTCGTGTGATTGCCTCCGCAAAGGCAGTGAATGGAGAATTCTCCCTAAGGTCAG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CATTTAATTATTGCCTCACTCTGGCTGCTATAGTATTACAACTCTTGGAACTTACAGCATCGATCCTACTATTA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 AAGTTGCCTGGAGCATGCCAGCACGTTGGACATCGGCGTTCCAGCAACTGCCTCAGTCACTGAATCGAGTGGGA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 GGCTCATTTTGCAGTTTACTATCTCCATGAGCAGGTCCAGGCGCGGGACCTGTTCTATGACTCGATTGGGTCCT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 GCCCTTGTCCGTCATCGGAAGGCTTACAGCGCCTACTGTTTTGCAGTAAGATTTGCAGGCTTAGTACCGCCTCT 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 GGAAACAAGGAGAGTGAAGGGGCGTTGACGAGTAACGTTGTTTGTATTTCTCTCCTCATTGGATGGCTGCTGTG 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 TCAGTCAGACACTTCTCTGCTTCCGTTGGCGGGAAGGCTTCAGGCGGGTAGCGGGGACTCGGTACTGCCCCCTC 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 CCAAGCTGGGAGCAGGGCGCGTGACGTCTCAGACATTTGTTGTTGGGATTTGGGCCTCATTAATTATTCATTAG 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 GTACTTGAAAGCTCTGCAGGGATTGGTGGCTGAGAGGCCTAGTCGACTGTTTCTTAGCTAGAGGTACGTGTCAC 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 CCAGTACGCGGCTGGAGTTTTGCATAAATTATTCCGATAAGGAGCGGGGCGGGGCTCTGTGCATAGATTAGTCA 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 AATGAGCCTGGGAGGGAGGGAAGCCGGCTACGAATTAGCCTAAGTTATTAAAGATGGCGACGGAGCGCAGTCGC 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 TCCGCGATGGACTCGCCGGTCCCGGCCTCTATGTTCGCCCCCGAGCCCAGCTCCCCGGGGGCGGCCAGGGCCGC 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 GGCGGCCGCCGCCCGACTCCACGGCGGCTTTGACTCGGACTGCAGCGAGGACGGCGAGGCGCTCAACGGCGAGC 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 CAGAGCTGGACCTCACCAGCAAGCTGGTTCTAGTGAGCCCTACATCAGAGCAGTATGACAGCCTACTTCGGCAG 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 ATGTGGGAGAGGATGGACGAGGGATGCGGAGAGACCATATATGTCATTGGGCAGGGATCAGATGGGACTGAGTA 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 TGGGCTGAGTGAAGCTGACATGGAGGCCTCCTACGCCACAGTGAAGAGCATGGCGGAACAGATAGAGGCCGATG 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 TCATCCTTCTGCGGGAACGGCAAGAAGCTGGGGGCCGCGTGCGTGATTACCTGGTCCGGAAACGAGTAGGAGAC 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 AATGACTTCCTGGAGGTCAGGGTAGCAGTGGTGGGCAACGTGGATGCTGGCAAAAGCACGCTTCTGGGGGTCCT 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 GACACATGGGGAGCTGGACAATGGCCGAGGCTTTGCCCGCCAGAAACTCTTCCGCCACAAACATGAAATTGAAT 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 CTGGTCGCACCAGCAGTGTGGGCAACGACATTCTGGGCTTTGACAGTGAAGGCAATGTAGTGAACAAGCCTGAC 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 AGCCACGGCGGCAGCCTGGAGTGGACCAAGATCTGTGAGAAGTCCACGAAAGTCATTACCTTCATCGACTTGGC 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 TGGTCATGAGAAGTACCTGAAAACCACTGTCTTCGGCATGACAGGCCATCTGCCTGACTTCTGCATGCTCATGG 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 TGGGCAGCAATGCTGGCATCGTGGGGATGACCAAAGAACACCTGGGCTTGGCACTGGCACTCAATGTACCTGTC 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 TTTGTGGTAGTCACCAAGATTGACATGTGTCCTGCCAACATCCTGCAAGAAACCCTGAAGCTGTTACAGCGCCT 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 GCTGAAGTCACCAGGCTGCCGGAAGATCCCCGTGCTGGTGCAGAGCAAAGATGATGTGATTGTCACAGCCTCCA 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 ACTTCAGCTCTGAAAGGATGTGCCCGATATTCCAGATCTCCAACGTTACAGGCGAGAACCTAGATCTGCTGAAG 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 ATGTTCCTCAACCTCCTCTCCCCCCGCACCAGCTACAGGGAGGAGGAGCCTGCTGAGTTTCAGATTGATGACAC 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 CTACTCCGTCCCGGGTGTGGGGACAGTGGTTTCGGGGACAACACTGAGAGGCCTGATCAAGCTGAATGACACGC 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 TGCTGCTGGGCCCAGACCCCTTGGGTAACTTCCTGTCCATTGCTGTCAAATCCATCCATCGCAAGCGCATGCCT 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 GTCAAGGAGGTGCGGGGTGGCCAGACAGCATCCTTTGCGCTGAAGAAGTGCACTGTGGGAGCATCAGGCAGACA 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 GCCACCATTCTGAGCATGGACAAGGACTGTCTGCGCACTGGGGACAAGGCCACTGTACACTTCCGCTTCATCAA 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 GACCCCTGAGTACCTGCACATAGACCAGCGGCTGGTGTTCCGGGAAGGCCGCACCAAGGCTGTCGGCACCATCA 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 CCAAGCTCCTCCAGACCACCAACAACTCCCCAATGAACTCCAAGCCGCAGCAGATTAAAATGCAGTCGACGAAA 3034
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3035 AAGGGCCCCCTGACGAAACGAGACGAGGGGGGCCCGTCTGGTGGGCCAGCAGTAGGAGCACCCCCACCTGGAGA 3108
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3109 TGAAGCCTCCTCTGTAGGGGCAGGGCAACCAGCTGCGTCCAGCAATCTCCAGCCTCAGCCTAAGCCCAGCAGTG 3182
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3183 GAGGCCGGCGACGAGGGGGCCAGCGCCACAAGGTGAAGTCCCAGGGGGCCTGTGTGACTCCTGCCAGCGGCTGC 3256
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3257 TGAACCTTCCCCTGGCCCACCCTCACCACCCAAGGGGTCATCATCTCTGGCCACCACTCCACCAGATGGGCAGA 3330
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3331 GCAGCTATGACCGCCACCCAGCCCTCCCGCTCAGGCCACAGCCGGAGCCTCCGCATTGCCCCCACCCCCATTTT 3404
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3405 CCAGGGGGGTTGTAATTTATAAGCTGACGAAGGTAGCCAGACTTCCGGAGGACTGACCATCTCTCACTGTCCTC 3478
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3479 CCCACCTTCTTCCTCACTCACACATTTTTTGTACATCTGGGCCCTTAGTTTTTATTCTGTTTATTATATGTCTC 3552
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3553 TGTCTCTCTCTATTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGTGCAGGAGTGCCACCCCCAG 3626
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3627 GGCCCTGTCAACCTCTCTTTTCTCCTCCATGGCTGTCTGCCTGCGTATCTGTCTCTGAGAATCCTCGGGGCGGT 3700
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3701 CAGGGGATGTCAGGAGGGGAAGGAGCCGCCCTCCCTATCTTGCTGCTCCTCTTGGCACTCAGGGGCACCTTCCA 3774
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3775 TGGAGCCAGACCGGGTGGAGGGGCTTCTGGGATTTGGTGTCTGCTGCTGCCAGAGCAGGAACCCCCAGTCTAGG 3848
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3849 ACTTGGGCATTTTAACAGGGAGAAAGTAGTGGCTTCCCTTTTCTCTCTCTCCTCCTTTTTCCCTTTAAGCCCAC 3922
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3923 AGATTCAGGTCATGCCAAAAGCTCTCTGGTTGTAACCTGGAGACATGTGGAGGGGAATGGCGATGGGATTATAG 3996
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3997 GACTCTCCCCATCTCGGGCCCTGACCCTGACCCTTGCCACCAACCCAAAGACAGCTGGTGGGTTTCCCCTTGGA 4070
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4071 GACAATCCTGCGTTTGCCTGGGCCGGCCCTGGCTGCCCTCAGCTTTCGCTGATCTGCCCGGCCTGGAGCCTCCC 4144
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4145 ATCACCCCGCTTCTTGTTGGGCCTCAGGCACTGGTTACCAGAAGGGGGTCTGGGTCTGCTCAGGATCATGTTTT 4218
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4219 GTAGCACCTCCTGTTGGAGGGGTGGAGGGATGTTCCCCTGAGCCAGGCTGAGACTAGAACCCCATCTTCCCTGA 4292
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4293 GCCAGGCTGAGACTAGAACCCCATCTTCCCCACCACGCCACCCCTGTGGCTGCTACAGGAGCACAGTAGTGAAG 4366
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4367 GCCTGAGCTCCAGGTTTGAAAGACCCAACTGGAGCGTGGGGCGGGCAGGCAGGGGTTAGTGAAAGGACACTTCC 4440
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4441 AGGGTTAGGACAGAGCATTTAGCCTTCTGGAAGAACCCCTGCCTGGGGTGGGACTGTGCAGGCCAGAGAAGGTG 4514
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4515 GCATGGGCCTGAACCCACCTGGACTGACTTCTGCACTGAAGCCACAGATGGAGGGTAGGCTGGTGGGTGGGGGT 4588
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4589 GGTTCGTTCTCTAGCCGGGGCAGACACCCAGCTGGCTGGGTCCTTCCTCAGCCTTGCCTCCTCCTGTCCCCAAC 4662
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4663 CCTTTCCTTTCCTCCTGCTTGCGGACTGCTGGTCCCCTCTCCTTCCCTCCTTCCAGCTGTTTCTAGTTACCACC 4736
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4737 TACCCCTGGCCGTGGACTGATCAGACCAGCATTCAAAATAAAAGTTTGTTCCAAGTTGACAGTGTGGTGCTCCC 4810
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4811 TGCCCAGCCCCTCCAGGTGGAGGTGCTGCCACGGGAACGCAGTTGCTCTGCCTGCCCTGGGGCCCCTGGCGACA 4884
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4885 GCTGGGAGCAGGGCAGTGCTGTGAGGAGCCCAGCTTTCCCAGTCAGGCAGGCATGGCTTCCGTGTTCAGGCTCC 4958
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4959 CTCACCAGCTGGTGACACGGGACAAGCTTACAAACCTTCTCTGAACCTCAGTTTTCTCATTTACAAGAGGCAAA 5032
Query 1 -------------------------------------------------------------------------- 0
Sbjct 5033 GCCATCCATCACCTTGTGTGGATTCAGAGAATGTGAGGCCCTGGGGTGTCCTACACAAGGGAAAGGCTTGCTCA 5106
Query 1 -------------------------------------------------------------------------- 0
Sbjct 5107 GTGAGCGGTCTGCACACCGTTAGCCACCCTGCCACCTCTGTGCCCTGGGCAGGCTCCAAAGGAAAGCTCTGGCT 5180
Query 1 -------------------------------------------------------------------------- 0
Sbjct 5181 GGGACTGCCAGGAGTCTCACACGCTCCTGTTGACATTCCCAGCAGCCGCCCCTGAGGTCGATGTTTGTTCTGTT 5254
Query 1 -------------------ATGGAGTCTCGCTCTGTTGCCCAGGCTGGAGTGCAGTGGCCTGATCTCGGCTCAC 55
|.|||||||||||.||||| |||||||||||||||||||..|||||||.||||||
Sbjct 5255 TTTCTTTTTCTTTTTTGAGACGGAGTCTCGCTGTGTTG-CCAGGCTGGAGTGCAGTGGTGTGATCTCTGCTCAC 5327
Query 56 TGCAACCTCTGCCTCCCAGGTTCAAGCGATTCTTCTGCCTCAGCCTCCAGAGTAGCTGGGACTATAGACATGCA 129
|||||||||.||||.||||.||||||.||||| |||||||||||||.|.|||||||||||||||.|| .||||
Sbjct 5328 TGCAACCTCCGCCTGCCAGTTTCAAGTGATTC-TCTGCCTCAGCCTTCTGAGTAGCTGGGACTACAG--GTGCA 5398
Query 130 --CCACCACGCCCGGCTAA--TTTTGTATTTTTGGTCGAGACGGGGTTTTGCCATGTTAGTCAGGCTGGTCTTG 199
|||||||||||.||||| ||||||| ||||.||.|||||.||||||.|||||||..|.||||.||||||||
Sbjct 5399 CGCCACCACGCCCAGCTAACTTTTTGTA-TTTTAGTAGAGACAGGGTTTCGCCATGTCGGCCAGGGTGGTCTTG 5471
Query 200 AACTCCTGACCTCAAGTGATCCA-CCACCTCGGCCTCCCAAAGTGTTGAGA----------------------- 249
|.|||||||||||| ||||||| ||.||||.|||||||||||||.||.||
Sbjct 5472 ATCTCCTGACCTCA--TGATCCACCCGCCTCAGCCTCCCAAAGTGCTGGGATTACAGGTATGAGCCACCGCACC 5543
Query 250 -------------------------------------------------------------------------- 249
Sbjct 5544 GGGCCTGTTCTATTTTTCTAGTTAAGGGAACTGAAGCTCAGAGAGGTGTCACCAGCAGGTGTTCATTCCCATGC 5617
Query 250 -------------------------------------------------------------------------- 249
Sbjct 5618 CAGCCTTGCCCCCCGGCTTTTCCCAGGCAGGCTCCTGCGTGCCCACTGGCTCCAGCCTGGTCCTCTGTCTCTTG 5691
Query 250 -------------------------------------------------------------------------- 249
Sbjct 5692 GCTGCTTCACTCCTGCTCTTTGTCCCGACTCTGGCCCTGCTTACAGGGGCCACTACCTGCTGGTGCCTCCATAA 5765
Query 250 -------------------------------------------------------------------------- 249
Sbjct 5766 CAAGCGTCTGGCGTTGAGACCCCTGGCATGGCAGGGGCTTTGGGGTCTGGTTTCCACAAGGCTTAGCCATGGCA 5839
Query 250 -------------------------------------------------------------------------- 249
Sbjct 5840 GAACCTCGTTTTATTTTAACTCTTTGCCCCTACAAACAAACAGCAGTACTTGCCAGAACCATTCTTGGGATTCA 5913
Query 250 -------------------------------------------------------------------------- 249
Sbjct 5914 GGAGCTCGGGCGACTGCCTTGGCCTCTGGCCGCACCCAGGAGGGTGGGGTTGGATCTGTGTAGTTGCCAGGCCC 5987
Query 250 -------------------------------------------------------------------------- 249
Sbjct 5988 ACACCTGCCAGCAGGGGGCTGACTGGATCCATGCTTTACTGTGTTTAATGGGGGTAACAGGGGTCCCTACAGCC 6061
Query 250 -------------------------------------------------------------------------- 249
Sbjct 6062 CTCCCAGCTAAACATTTGGAACAAAACACCAGCCCTTTTGTAGTGGATGCAGAATAAAATTGTTAATCCAATCA 6135
Query 250 ------- 249
Sbjct 6136 CCTCCAA 6142