Nucleotide Global Alignment

Description

Query:
ccsbBroad304_10792
Subject:
XR_001755384.1
Aligned Length:
4977
Identities:
217
Gaps:
4729

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  GGTGTCCAGGAGTCTCTCTGCTGCCAGCCCCGCCCAGACTCCAGGCAGGTTCTCGTTGCTATGGTGATCGCCGG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  TGCAAGCTGGATGCTTGGACGCGCCGCTGCCAGTCCAACGCAGACCCCGCCCACGACGTCGACGATTCGTGTAG  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  CCCGCAGGTCCCGCGTGGCTCTCGTTGCCATGGTGATCGCCGCCGCTGGCTCAGGCGGACCAGGCCGCGCGGAG  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  CCCCAGCTTTCACAGCCATCGCTGTGGTACACGCCGGAAGCCTGTTTGCAGCTCAGGGAGCACTTCCACGGGCA  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  GGTCAGCGCTGCCTGCCAACGCAGGAACACGGGGACTGTCGGGCTCAAACTCTCCAAGGTGGTGGTGGTTGGCG  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  ATCTCTACGTGGGGAAGACCAGCCTCATCCACAGGTTTTGCAAGAATGTTTTTGATCGAGACTACAAGGCCACC  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  ATTGGGGTGGACTTTGAAATTGAGCGCTTTGAGATTGCTGGGATTCCCTATAGCCTCCAGATCTGGGACACAGC  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  TGGGCAGGAGAAGTTCAAGTGCATCGCATCTGCCTACTACCGGGGTGCCCAGGTGATCATCACGGCCTTTGACC  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  TCACTGACGTGCAGACCCTGGAGCATACCAGGCAGTGGTTGGAGGATGCTCTGAGGGAGAACGAGGCAGGCTCC  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  TGCTTCATCTTCCTCGTGGGAACCAAGAAGGACCTTCTGGCGAGAACGTGAAGGCATTCTTCAGCCGCGTAGCC  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  GCCCTGGCATTCGAGCAGTCGGTGCTGCAGGACCTGGAGAGGCAGAGCAGTGCCCGGCTCCAGGTCGGCAATGG  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  AGACCTAATCCAAATGGAAGGGAGTCCGCCCGAGACCCAGGAGAGCAAGAGGCCCTCCAGCCTGGGCTGCTGCT  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  AACTGGGGCCTGCGTGGAAGGCCTCCGCTCCCTGCACACACACGGACAGGAATTTCCGTGACTGTGGTGTGGAG  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  ACTGGAGCCCAAGCTCTGCAGCGTGTCGCCCTCAAGCTGTAGGCCCATGTTCCAGTCCCTCCACCCACCCACCG  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  GGCTCAGCTCCAGGGCACAGTCACTTGTCCGTTGCAGGTTGGGCACTAGAAAAGGCCCCCACTGGCTGCCTGGG  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  AGCCCCACACCACCGGGCCAGTGCAGGCACTGTGGTGATCCCATAAAAGGCCAGTCCATTTGCAGGGTCATCAG  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  ACAGTCACCTTTGGCCTCAAGAGGCCTCAGAACTGCAAACTCCTGCGTCGGTCTATACTACTCGGCCATGGCCC  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  ACATCAGCAGTCAACCCTGCACTCTTTCCCAGCGATCTTGGATGTGTCCCCAGGATCCGTCACAGTGTTCCAGG  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  CAACCTGGACTTGTCAAAGTCAGCACCTGAAGGAGAGGCCACCTGCCATTCCCCCTGGGAGTTTTCTGTTGTCA  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  GCAGGACTTATGGTTCTGGGTCTCAGAGCTTCAGGCCTCACTGTCCTTCTGCCACGGATGCTCAAGGTTCCTGG  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  GCAGACCAGCACCTCTGGAGGACAATGGACAAAATGTCTCTTAGACCTGTTCTGGCTGAAGGGCTATCTCTGGC  1554

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1555  ACCTCTGAGATCCCTAGGTCCTGCCCTCCTGGTCCGTGGGCCAGGATGTGCAGAACAACCACTCAGGCCTTTCT  1628

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1629  GGCCCACCTGGACAGTGCATTTACCTGTGTGCTGCGGGAGGCAGACTGCACAGCTGTCCTAGGGTAACTCACTC  1702

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1703  TGCAGCCCTTGAACATGGCACTGCCCTCCTCTGGCACTCATGCTGGGCCTGTGCCCACTGCTGCCTCTCCATCC  1776

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1777  CTCTCTCATTGGCCTATACATCTCTTAGGACCTTTGTAATGGTGTCCATGCACCTTTAGAGGACTTCAGAGGCC  1850

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1851  CTGCCAAGTCTAGCATGTTCCTGTCTCCAACACCGCCTCCTGCACATGCAGAGCAGACAGAAATACCCCACACA  1924

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1925  TTCCCCAGCCTCTCTGCCCAGTATGCTCATCCACAGGGTTTTCTCACTGCTATGAACCAGCCCCACAGCCCCAG  1998

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1999  GCCCCTGTCACCTGGCTATGCCCACTCATCCCACCCGTCTCGTGCTGTTGCTTCCCGTAGATGGCGAGCACCTT  2072

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2073  GCAGGCAGCCTTCTGATCAGTACTGCTCTCCTAGGGCCTGGCACACTGCAGCTGCCCTGTAAATGTTCAGCTCA  2146

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2147  GCGATTGCCAAATACCAGTTAGGGAAGAACACTGGCATCTTTTTCTATTCATTCCCCCTTCAACATATTTTTTG  2220

Query    1  -------------------------------------ATGGAGTCTCGCTC-TGTTGCCCAGGCTGGAGTGCAG  36
                                                 |||||||.||.|.| |||||||||||||||||||||.
Sbjct 2221  TAGTTTTTTATATAAATGACTTTTTTTTTTTTTTGAGATGGAGTTTCACCCTTGTTGCCCAGGCTGGAGTGCAA  2294

Query   37  TGGCCTGATCTCGGCTCACTGCAACCTCTGCCTCCCAGGTTCAAGCGATTCTTCTGCCTCAGCCTCCAGAGTAG  110
            ||||.|.|||||||||||.||||||||||||||||||||||.||||||||||.||||||||||||||..|||||
Sbjct 2295  TGGCGTAATCTCGGCTCAGTGCAACCTCTGCCTCCCAGGTTGAAGCGATTCTCCTGCCTCAGCCTCCCAAGTAG  2368

Query  111  CTGGGACTATAGACATGCACCACCACGCCCGGCTAATTTTGTATTTTTGGTCGAGACGGGGTTTTGCCATGTTA  184
            ||||||.||.||.||||||||||||.|||.||||||||||||||||||.||.||||.|||||||..|||||||.
Sbjct 2369  CTGGGATTACAGGCATGCACCACCATGCCTGGCTAATTTTGTATTTTTAGTAGAGATGGGGTTTCTCCATGTTG  2442

Query  185  GTCAGGCTGGTCTTGAACTCCTGACCTCAAGTGATCC--ACCACCTCGGCCTCCCAAAGTGTTGAGA-------  249
            |||||||||.|||.|.||||||||.||||.|||| ||  .|||||||||||||||.|||||.||.||       
Sbjct 2443  GTCAGGCTGCTCTCGGACTCCTGATCTCAGGTGA-CCTGCCCACCTCGGCCTCCCGAAGTGCTGGGATTACAAG  2515

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2516  GGTGAGCCACCATGCCCGGCCATAAATGATTTTATTCATTTTTATGTTTTCTTTTGGGCGGCGGGATGGAGTCT  2589

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2590  CTGTCACCCAGGCTGGCGTGCAATGGCACGATCTTGGCTCACTGCAAGCTTCCCCTTCCGGGTTCATGCCATTC  2663

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2664  TCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCACGTGTGACCATGCCGGGCTAATTTTTTATATTTTTA  2737

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2738  GTAGAGAGAGGTTTCACCGTGTTAGCCAGGATGGTCTCGATGATCTGACCTCGTGATCTGCCCGCCTCGGCCTC  2811

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2812  CCAAAGTGCTGGGATTACAGGCCTGAGCCACCGCGTCCGGCCTCCATAAATGACTTTTAAAGGGGTTGTATGTT  2885

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2886  TAGTGTGAACAAAGACAGTACAAAGCATATAAAATACAAGGTGAAAGCCCCCCCCCCGCCACATTAGCTGCGCC  2959

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2960  CCTGAAGTGTCTCCAGCAGAAGAGATGGATGAATGGAAGGACACACAGATGGACAGAGAGCAGGAAAGACTGTT  3033

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 3034  AGCTCTGCTAACAGTCAGGACTATTCCTTCTGGACTCTGTGCCTTTGCCTGCACAGCTAGTGTTGATGGCTTGT  3107

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 3108  TTGTTGTTTTCACCAGAGTGAGCTCCTTCTGGACATACTGCCTGGCAGCCTGCCTTCCTAGGGAGCTGGCGCCA  3181

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 3182  AGGCCTCTCCCTGATGGCACACAAGGAGCCTCCTTCCTGTAGCAGCGCCCAGTTTTCATGTGGATGGATTGTAG  3255

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 3256  TTCATTTGACCCTCCCCATCCGCGGGCCATCCGGCTTGTGTCCAGCTTTTAGCTCTTGCCAATGGTGCTGCAGT  3329

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 3330  GGCCATTCTTGTAGTTATAGCTTTGCGTACTCAGGAAGGCCCTTCTCCCGACTGCGGCCCCCAGCCTGGTCCAC  3403

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 3404  TAAATGCAGCCTGTGGTCGGGCAGACAGCATTGGGGTCCATTAGGAAGACCAGGTTTGCTGGGCATAAGCTTCA  3477

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 3478  CAGGACGGGAGAACCTGCCCATGGTGGACTGTCGTTCTCCACAGCTCCCTTCCCTTGCCCCTTCGGGCCTCCAG  3551

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 3552  GATATGTTTGCGGGGGTGGGTGTGGTGTCCAGCTGTTACCAGCTTCTGAGCTAGAGCTGTACTGCCTCACGTAC  3625

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 3626  ACCCCCACCTCTGTAAATGGTCCTTGATTAAATCGTCCTCATATTACCTCCTGCAATGTGCCAGCTGATTCCCA  3699

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 3700  CACACCCTGACTGACATAGTTGTGGCCTCTCGAACTTTGATATTTGGCCTGGGAGGACAGAAGAGTAAGGTCGC  3773

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 3774  CACGGAAACGCAAGGGGCTCAGTTGTCCCCCCACCCCAAGTTGATGCAGCATCTTCTCGGTCAGAATTGCTTCA  3847

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 3848  GGGTGGTTTGCGCACCCTCACTTTGATGATTTAATGAAGACATTTCCTTCTTTCCCAGCATCGGGCAGTAAGTT  3921

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 3922  TCCTGGGCAGAGGCACTTTCTGTTGGTCTGGTCTTGTGGGCCCAGGCAAGCAGCCCCCTGCAGCCAAGGTGCGG  3995

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 3996  CAATGACCACAGTGACCGCGTCCAAGTGCTGCCGAAACGCCTTTTTCCTCTTCCCTGTTTCCCTGGACCCTTTC  4069

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 4070  CTGCTCTCTGTCCATCTGTGTGTCCTTCCGTTCACCTGTCTCTTCTGCTGGAGACACGTACCTGAAGCAGGTCC  4143

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 4144  TCTCCTGTCACTTCCTGGCTCCCCAGGGCTAGGTCCCAGGGTGCTCTCGCTCTGGCTTTCGAGGCTCCTCACCA  4217

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 4218  CCCAGCCCACCCCACCCCCACAGGCCCCTGTGCTCCAGTTTCATCCCTGGTCACAATGCAGTCTGCAGATGCCA  4291

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 4292  GACCCCTCTTCTGTGCCCAACGGCTGGGACACCCCTACTCCCAGAGAGGCCTCTGTGGACACCCCCACAGCTCT  4365

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 4366  CGCAGCACTTGATACCTTGAGTGTGATTGGTCACATCTGGGCTTTCTCCCCCACCCATCTGTGGAACCCCAAGA  4439

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 4440  GCCAGGACAGTGACCTCATCACCTCTACTGTCTCCCCTAGCACCTCTGGGAGGAAGGGCCCACAGTAGGTGCTC  4513

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 4514  AATAGATGTGTAAAGAAGGCAGGGAAGCAAGAAGGTTGCTCAAACAAGACCATGTTCCCAGCAGACAGATTGCA  4587

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 4588  CTCTGACCCAGATGCCACCACACGAAACTTACACCTGCCTGGGGAACAATCCTGTGCTTGGCTCTCCTTGGTGG  4661

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 4662  CCAGGGACAGTTGTGCCTCATCCCTCACTTGCAAACCCCAGTCCTGTCTGACCCAGAGACCCTCACAGGGCATC  4735

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 4736  AGCCAGTGAAGGCGGTTTGGGGCTGGAGGATATGTTCTGATCTTGGGAAGAGCTTGGTAGGAGCCAGCCACAGA  4809

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 4810  AAGTTTCAGGGCAGAACTGAACAGGTCTCGGGAAGGACACTTCATGCCAGCTAGAGAGGCTCTGGGCACAGGAA  4883

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 4884  AGAATTGGACTTCGGGCAGAAAAATGTTTGTGCTATTTAGTACTATGTAACAAATCACTCCAAAACTTCATTGC  4957

Query  250  -------------------  249
                               
Sbjct 4958  TTAAAGCAACAAGCATGTA  4976

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