Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_10792
- Subject:
- XR_001755387.1
- Aligned Length:
- 5087
- Identities:
- 217
- Gaps:
- 4839
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 CAGGGTGTCCAGGAGTCTCTCTGCTGCCAGCCCCGCCCAGACTCCAGGCAGGTTCTCGTTGCTATGGTGATCGC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CGGTGCAAGCTGGATGCTTGGACGCGCCGCTGCCAGTCCAACGCAGACCCCGCCCACGACGTCGACGATTCGTG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TAGCCCGCAGGTCCCGCGTGGCTCTCGTTGCCATGGTGATCGCCGCCGCTGGCTCAGGCGGACCAGGCCGCGCG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GAGCCCCAGCTTTCACAGCCATCGCTGGACTGTGGAAGAATGAGGTCCTCCCTGACACCTTTGGGGCCCCCTGT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GAGCCGCGACCGTGTCATCGCCAGCTTCCCTAAGTGGTACACGCCGGAAGCCTGTTTGCAGCTCAGGGAGCACT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TCCACGGGCAGGTCAGCGCTGCCTGCCAACGCAGGAACACGGGGACTGTCGGGCTCAAACTCTCCAAGGTGGTG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GTGGTTGGCGATCTCTACGTGGGGAAGACCAGCCTCATCCACAGGTTTTGCAAGAATGTTTTTGATCGAGACTA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CAAGGCCACCATTGGGGTGGACTTTGAAATTGAGCGCTTTGAGATTGCTGGGATTCCCTATAGCCTCCAGATTG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 ATCATCACGGCCTTTGACCTCACTGACGTGCAGACCCTGGAGCATACCAGGCAGTGGTTGGAGGATGCTCTGAG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GGAGAACGAGGCAGGCTCCTGCTTCATCTTCCTCGTGGGAACCAAGAAGGACCTTCTGTCAGGGGCCGCATGTG 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 AGCAGGCCGAAGCAGACGCTGTGCACCTGGCCAGGGAGATGCAGGCCGAGTACTGGTCAGTGTCGGCCAAGACT 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 GGCGAGAACGTGAAGGCATTCTTCAGCCGCGTAGCCGCCCTGGCATTCGAGCAGTCGGTGCTGCAGGACCTGGA 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 GAGGCAGAGCAGTGCCCGGCTCCAGGTCGGCAATGGAGACCTAATCCAAATGGAAGGGAGTCCGCCCGAGACCC 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 AGGAGAGCAAGAGGCCCTCCAGCCTGGGCTGCTGCTAACTGGGGCCTGCGTGGAAGGCCTCCGCTCCCTGCACA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 CACACGGACAGGAATTTCCGTGACTGTGGTGTGGAGACTGGAGCCCAAGCTCTGCAGCGTGTCGCCCTCAAGCT 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 GTAGGCCCATGTTCCAGTCCCTCCACCCACCCACCGGGCTCAGCTCCAGGGCACAGTCACTTGTCCGTTGCAGG 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 TTGGGCACTAGAAAAGGCCCCCACTGGCTGCCTGGGAGCCCCACACCACCGGGCCAGTGCAGGCACTGTGGTGA 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 TCCCATAAAAGGCCAGTCCATTTGCAGGGTCATCAGACAGTCACCTTTGGCCTCAAGAGGCCTCAGAACTGCAA 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 ACTCCTGCGTCGGTCTATACTACTCGGCCATGGCCCACATCAGCAGTCAACCCTGCACTCTTTCCCAGCGATCT 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 TGGATGTGTCCCCAGGATCCGTCACAGTGTTCCAGGCAACCTGGACTTGTCAAAGTCAGCACCTGAAGGAGAGG 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 CCACCTGCCATTCCCCCTGGGAGTTTTCTGTTGTCAGCAGGACTTATGGTTCTGGGTCTCAGAGCTTCAGGCCT 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 CACTGTCCTTCTGCCACGGATGCTCAAGGTTCCTGGGCAGACCAGCACCTCTGGAGGACAATGGACAAAATGTC 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 TCTTAGACCTGTTCTGGCTGAAGGGCTATCTCTGGCACCTCTGAGATCCCTAGGTCCTGCCCTCCTGGTCCGTG 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 GGCCAGGATGTGCAGAACAACCACTCAGGCCTTTCTGGCCCACCTGGACAGTGCATTTACCTGTGTGCTGCGGG 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 AGGCAGACTGCACAGCTGTCCTAGGGTAACTCACTCTGCAGCCCTTGAACATGGCACTGCCCTCCTCTGGCACT 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 CATGCTGGGCCTGTGCCCACTGCTGCCTCTCCATCCCTCTCTCATTGGCCTATACATCTCTTAGGACCTTTGTA 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 ATGGTGTCCATGCACCTTTAGAGGACTTCAGAGGCCCTGCCAAGTCTAGCATGTTCCTGTCTCCAACACCGCCT 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 CCTGCACATGCAGAGCAGACAGAAATACCCCACACATTCCCCAGCCTCTCTGCCCAGTATGCTCATCCACAGGG 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 TTTTCTCACTGCTATGAACCAGCCCCACAGCCCCAGGCCCCTGTCACCTGGCTATGCCCACTCATCCCACCCGT 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 CTCGTGCTGTTGCTTCCCGTAGATGGCGAGCACCTTGCAGGCAGCCTTCTGATCAGTACTGCTCTCCTAGGGCC 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 TGGCACACTGCAGCTGCCCTGTAAATGTTCAGCTCAGCGATTGCCAAATACCAGTTAGGGAAGAACACTGGCAT 2294
Query 1 -------------------------------------------------------------------------A 1
|
Sbjct 2295 CTTTTTCTATTCATTCCCCCTTCAACATATTTTTTGTAGTTTTTTATATAAATGACTTTTTTTTTTTTTTGAGA 2368
Query 2 TGGAGTCTCGCTC-TGTTGCCCAGGCTGGAGTGCAGTGGCCTGATCTCGGCTCACTGCAACCTCTGCCTCCCAG 74
||||||.||.|.| |||||||||||||||||||||.||||.|.|||||||||||.|||||||||||||||||||
Sbjct 2369 TGGAGTTTCACCCTTGTTGCCCAGGCTGGAGTGCAATGGCGTAATCTCGGCTCAGTGCAACCTCTGCCTCCCAG 2442
Query 75 GTTCAAGCGATTCTTCTGCCTCAGCCTCCAGAGTAGCTGGGACTATAGACATGCACCACCACGCCCGGCTAATT 148
|||.||||||||||.||||||||||||||..|||||||||||.||.||.||||||||||||.|||.||||||||
Sbjct 2443 GTTGAAGCGATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGATTACAGGCATGCACCACCATGCCTGGCTAATT 2516
Query 149 TTGTATTTTTGGTCGAGACGGGGTTTTGCCATGTTAGTCAGGCTGGTCTTGAACTCCTGACCTCAAGTGATCC- 221
||||||||||.||.||||.|||||||..|||||||.|||||||||.|||.|.||||||||.||||.|||| ||
Sbjct 2517 TTGTATTTTTAGTAGAGATGGGGTTTCTCCATGTTGGTCAGGCTGCTCTCGGACTCCTGATCTCAGGTGA-CCT 2589
Query 222 -ACCACCTCGGCCTCCCAAAGTGTTGAGA--------------------------------------------- 249
.|||||||||||||||.|||||.||.||
Sbjct 2590 GCCCACCTCGGCCTCCCGAAGTGCTGGGATTACAAGGGTGAGCCACCATGCCCGGCCATAAATGATTTTATTCA 2663
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2664 TTTTTATGTTTTCTTTTGGGCGGCGGGATGGAGTCTCTGTCACCCAGGCTGGCGTGCAATGGCACGATCTTGGC 2737
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2738 TCACTGCAAGCTTCCCCTTCCGGGTTCATGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCA 2811
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2812 CGTGTGACCATGCCGGGCTAATTTTTTATATTTTTAGTAGAGAGAGGTTTCACCGTGTTAGCCAGGATGGTCTC 2885
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2886 GATGATCTGACCTCGTGATCTGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCCTGAGCCACCGCGTCC 2959
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2960 GGCCTCCATAAATGACTTTTAAAGGGGTTGTATGTTTAGTGTGAACAAAGACAGTACAAAGCATATAAAATACA 3033
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3034 AGGTGAAAGCCCCCCCCCCGCCACATTAGCTGCGCCCCTGAAGTGTCTCCAGCAGAAGAGATGGATGAATGGAA 3107
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3108 GGACACACAGATGGACAGAGAGCAGGAAAGACTGTTAGCTCTGCTAACAGTCAGGACTATTCCTTCTGGACTCT 3181
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3182 GTGCCTTTGCCTGCACAGCTAGTGTTGATGGCTTGTTTGTTGTTTTCACCAGAGTGAGCTCCTTCTGGACATAC 3255
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3256 TGCCTGGCAGCCTGCCTTCCTAGGGAGCTGGCGCCAAGGCCTCTCCCTGATGGCACACAAGGAGCCTCCTTCCT 3329
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3330 GTAGCAGCGCCCAGTTTTCATGTGGATGGATTGTAGTTCATTTGACCCTCCCCATCCGCGGGCCATCCGGCTTG 3403
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3404 TGTCCAGCTTTTAGCTCTTGCCAATGGTGCTGCAGTGGCCATTCTTGTAGTTATAGCTTTGCGTACTCAGGAAG 3477
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3478 GCCCTTCTCCCGACTGCGGCCCCCAGCCTGGTCCACTAAATGCAGCCTGTGGTCGGGCAGACAGCATTGGGGTC 3551
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3552 CATTAGGAAGACCAGGTTTGCTGGGCATAAGCTTCACAGGACGGGAGAACCTGCCCATGGTGGACTGTCGTTCT 3625
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3626 CCACAGCTCCCTTCCCTTGCCCCTTCGGGCCTCCAGGATATGTTTGCGGGGGTGGGTGTGGTGTCCAGCTGTTA 3699
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3700 CCAGCTTCTGAGCTAGAGCTGTACTGCCTCACGTACACCCCCACCTCTGTAAATGGTCCTTGATTAAATCGTCC 3773
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3774 TCATATTACCTCCTGCAATGTGCCAGCTGATTCCCACACACCCTGACTGACATAGTTGTGGCCTCTCGAACTTT 3847
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3848 GATATTTGGCCTGGGAGGACAGAAGAGTAAGGTCGCCACGGAAACGCAAGGGGCTCAGTTGTCCCCCCACCCCA 3921
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3922 AGTTGATGCAGCATCTTCTCGGTCAGAATTGCTTCAGGGTGGTTTGCGCACCCTCACTTTGATGATTTAATGAA 3995
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3996 GACATTTCCTTCTTTCCCAGCATCGGGCAGTAAGTTTCCTGGGCAGAGGCACTTTCTGTTGGTCTGGTCTTGTG 4069
Query 250 -------------------------------------------------------------------------- 249
Sbjct 4070 GGCCCAGGCAAGCAGCCCCCTGCAGCCAAGGTGCGGCAATGACCACAGTGACCGCGTCCAAGTGCTGCCGAAAC 4143
Query 250 -------------------------------------------------------------------------- 249
Sbjct 4144 GCCTTTTTCCTCTTCCCTGTTTCCCTGGACCCTTTCCTGCTCTCTGTCCATCTGTGTGTCCTTCCGTTCACCTG 4217
Query 250 -------------------------------------------------------------------------- 249
Sbjct 4218 TCTCTTCTGCTGGAGACACGTACCTGAAGCAGGTCCTCTCCTGTCACTTCCTGGCTCCCCAGGGCTAGGTCCCA 4291
Query 250 -------------------------------------------------------------------------- 249
Sbjct 4292 GGGTGCTCTCGCTCTGGCTTTCGAGGCTCCTCACCACCCAGCCCACCCCACCCCCACAGGCCCCTGTGCTCCAG 4365
Query 250 -------------------------------------------------------------------------- 249
Sbjct 4366 TTTCATCCCTGGTCACAATGCAGTCTGCAGATGCCAGACCCCTCTTCTGTGCCCAACGGCTGGGACACCCCTAC 4439
Query 250 -------------------------------------------------------------------------- 249
Sbjct 4440 TCCCAGAGAGGCCTCTGTGGACACCCCCACAGCTCTCGCAGCACTTGATACCTTGAGTGTGATTGGTCACATCT 4513
Query 250 -------------------------------------------------------------------------- 249
Sbjct 4514 GGGCTTTCTCCCCCACCCATCTGTGGAACCCCAAGAGCCAGGACAGTGACCTCATCACCTCTACTGTCTCCCCT 4587
Query 250 -------------------------------------------------------------------------- 249
Sbjct 4588 AGCACCTCTGGGAGGAAGGGCCCACAGTAGGTGCTCAATAGATGTGTAAAGAAGGCAGGGAAGCAAGAAGGTTG 4661
Query 250 -------------------------------------------------------------------------- 249
Sbjct 4662 CTCAAACAAGACCATGTTCCCAGCAGACAGATTGCACTCTGACCCAGATGCCACCACACGAAACTTACACCTGC 4735
Query 250 -------------------------------------------------------------------------- 249
Sbjct 4736 CTGGGGAACAATCCTGTGCTTGGCTCTCCTTGGTGGCCAGGGACAGTTGTGCCTCATCCCTCACTTGCAAACCC 4809
Query 250 -------------------------------------------------------------------------- 249
Sbjct 4810 CAGTCCTGTCTGACCCAGAGACCCTCACAGGGCATCAGCCAGTGAAGGCGGTTTGGGGCTGGAGGATATGTTCT 4883
Query 250 -------------------------------------------------------------------------- 249
Sbjct 4884 GATCTTGGGAAGAGCTTGGTAGGAGCCAGCCACAGAAAGTTTCAGGGCAGAACTGAACAGGTCTCGGGAAGGAC 4957
Query 250 -------------------------------------------------------------------------- 249
Sbjct 4958 ACTTCATGCCAGCTAGAGAGGCTCTGGGCACAGGAAAGAATTGGACTTCGGGCAGAAAAATGTTTGTGCTATTT 5031
Query 250 ------------------------------------------------------- 249
Sbjct 5032 AGTACTATGTAACAAATCACTCCAAAACTTCATTGCTTAAAGCAACAAGCATGTA 5086
