Nucleotide Global Alignment

Description

Query:
ccsbBroad304_10792
Subject:
XR_001755602.2
Aligned Length:
3057
Identities:
86
Gaps:
2959

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATCGCGCCACTGCACTCCAGTCTGGGTGACAGAGCAAGACTCCGTCTCCAAAAAAAAATTAAATTAAAATGTCG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  GTTTCCTAAGGAGTTCAACTGGAACACCACCATGCTTGTTCATGTAGTTAAAAGTCTGCAAGTGCTTGGTACAT  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  ACACAGATGGTATTTATTTGCTGTTTGTCTTAAATTGCATTCTTATGCATCATAGAGACTGCGATAAGGAGAAG  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  AAAAAATATTTTCTACAGGACCATCCAAACATGACAAGAGCAAAAATCACCCCCTGCAGAACCTAGGAGCTACG  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  TGCAGAACTTTACAGAGTTGAGGCAGCGCCGTAGCTGAGGCCTGACTGCTAACCAGGGAGTGGAGCTCTGAGTG  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  CACTCAAGGAACGCAAGGAAGCCAGGCAGGGAGGAAGGGGCCGGCGGAGTCTAACTTCAGCTGCCATCTTTTTT  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  GGTGGCACATCTCGTGGTCACAGGTTGTAGGCTGTGTTTCTGGAAGGTTCAGGTACAGCGCAAGATTCCACTTG  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  TCTACTTGGCTATCTCTGTGCCTGAGGTGCCATGAGGCCAACGGACGTCACTCAAATTCATGTCCAGCCAAACT  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  CCCACAGCAAAGAATCCCGAACCGAGGATGAAGTTCCTCTAGAAAGCATTCCTATCTGTGGCAAAGCTGCAGAC  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  ACCCCGAAACCCATCTCCCACCTCGTCTGGAATTTCAGGAGCTTCGTTTGCTGAGCCAGTGCACTCATGGCAAC  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  CCTGCAGGAAGCCATGTGGCACCTCTGGGCTTTGCACCGTGTGTGTTCTCTTCTCTAAACTGCTGTTTTTGCTT  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  AGCAAAGAGCCTCGCCTGCCACTGATGATGGCAGTGTGGGGTCATTTTGAATGGCTGCCTGACACTGCATGGCA  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  CATTCACGTACACAGTCCTGTGGGATCGTGACATAATAAGAAATAGATATTTCATCTCTGCCCCTGGTTCCTGA  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  CACAGAGCTCCTAAAACCATTGAAATTTCCTGGATAATAGGAGCTTCTTCTGTTCCAATGGGGTGACTCTTGGT  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  GGGCTCCTGGATGGGGGCTGGTCACTAGCGAGACCACACCATGATGAGAAACCTGGAGCTTCAGCCCTACCCCC  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  ACCTCTGAGCAGGGGAGACGGGCTAGCTAGAGGCGCGGTTCCTAATGCGCCATATGCCTACATGAAGACGTCTC  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  CGTAAAAGTCCCTCAGCAGTGGGGGTTTGGAGAGCTCCCAGCTATTATGAGAAATACCACTGCGATGAGTCTTC  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  ACATACAAGTGTGTATGTGGACACATATTTTCATTTCTTGGGGATATGCCTCAGAGTGGACTTGCTGGGACCTA  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  TGGACGCTCTGTGTTCAGCATTTTGAAGCATTGCCCGACCGTTTTCTAAAGCAGGTGCACCATTTGACGGTCCC  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  ACCAGCAGCATGAGAGAGTTCCAGTGTCTCCACATCCTCGTCAACACTCACTACCTGACTTTTTGGGTCTAGCT  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  CTCCAGGCCAGGAAGCCGAACCAAATCCACCTCCCTCAGGTGTGCCCGCGGGACCTGTGTGTGTGCAAGTTTCT  1554

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1555  ATCTTCCAGAAGGTTCCAGTGTCTGCCATGGCTCTTGGCCTGCCAGGAAGTATCCTTCTTACTACTTGTGAGGC  1628

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1629  TGAGGCTTTGTGTGCCAGAGTACAGGTGCCCGGCCAGTATGGGTCTGAGGGTTGTGTGGGCATTGGTTCAGCAC  1702

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1703  ACAAGCCACAACCCTTGTTCCTTAAAGGTGGGCGTGTTGTGGAAGCACAGGAAAGTTATTCTCAAATATGACAC  1776

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1777  CCATGTAAGGCCTGGGCTCCACTATTAATTTGTCTGATTATATCCTGGTGACAAGGAGGACAAATTTCTACTGC  1850

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1851  AACAATGCAAATTACTACGTTTTTATTAAAAGTAAATGTCAGTAAAACTATTTTTCCTGAATTCTGAAGTGAGA  1924

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1925  AAAACACCATTTAAAGAACGTTTTAATGTTTGTGAAAGGATAGTCTCCTAAAGTAGATTGTTGCAGATACCGGG  1998

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1999  TAAAAATAAAAATTAAATAAATTAAAGGTGAGATAGATCAAAGAAGAAGGGTTTTGTCTTATTCCTGCCAGAAA  2072

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2073  CAGAATATCAGAAACAACATGAGCATCCTCCTCCTTGCCTTTTCTTGGGCTGTGCTTTCAGCCTGCAGATATAA  2146

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2147  CCATTCTGGAGAGCAGTGATGCCCCCAGAACCGCATTTTTGGCTGGTGCAAAATGGGGGGCAGTGGTTGTGTCT  2220

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2221  GGGGCCAAGTTTCTGTCCTGTATAGCCTAGAGATGGTTATGTAGCGGGGGACTGAGCTACTAAGTGAAGGCATA  2294

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2295  GATAGTTATGTAGAAACAGAGGAGGGTAGAATCAACTCCATGCTAGATTGTAACTGGAGGTACAGGTATCAGTA  2368

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2369  TGAACTCAAGGTTTGCTAAGAGGTATCAGAAAAGATATGGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT  2442

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2443  GTGTGTGTGTGTGTTTGTACATACTTATTTCCTAGCTCTGTCTGCTGAGTGTAAATGGAATCATATTCTGTAAT  2516

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2517  CTTTTGAGATTTCTTTCTTCCATTTAAAATTATGTGTTTGAGATTTGGCCGTGTTGGTGGTGGAATTCATTCAT  2590

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2591  TTCTGTTGCTGTGTGCTATTCCATTGCGTGGATACACCTCACTTTGTCCATTTTACCGTCCTTTGATATTTAAG  2664

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2665  ATTTCTCCCAGTATTTGCTATTAAAAACAGCGTTAAAATAAAAAAAAAAAAACACCAAAAACAGTGTTGCTCTG  2738

Query    1  ----------------------------------------------------------------------ATGG  4
                                                                                  ||||
Sbjct 2739  AACATTCATGCACATGCTTCCTGATGAACAAGTTTCTTTTTTTCTTTTCTTTTTTTTTTTTTTTTTTTAGATGG  2812

Query    5  AGTCTCGCTCTGTTGCCCAGGCTGGAGTGCAGTGGCCTGATCTCGGCTCACTGCAACCTCTGCCTCCCAGGTTC  78
            |||||.||||||||||||||||||||||||||||||...|||||.|||||||||||.||||||||||..|||||
Sbjct 2813  AGTCTTGCTCTGTTGCCCAGGCTGGAGTGCAGTGGCGCAATCTCTGCTCACTGCAAACTCTGCCTCCTGGGTTC  2886

Query   79  AAGCGATTCTTCTGCCTCAGCCTCCAGAGTAGCTGGGACTATAGACATGCACCACCACGCCCGGCTAATTTTGT  152
            |..|.|||||.|||||||||                                                      
Sbjct 2887  ACACCATTCTCCTGCCTCAG------------------------------------------------------  2906

Query  153  ATTTTTGGTCGAGACGGGGTTTTGCCATGTTAGTCAGGCTGGTCTTGAACTCCTGACCTCAAGTGATCCACCAC  226
                                                                                      
Sbjct 2907  --------------------------------------------------------------------------  2906

Query  227  CTCGGCCTCCCAAAGTGTTGAGA  249
                                   
Sbjct 2907  -----------------------  2906

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