Nucleotide Global Alignment

Description

Query:
ccsbBroad304_10792
Subject:
XR_002956450.1
Aligned Length:
3965
Identities:
215
Gaps:
3720

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ACCAGGTAAAGCCCTATCACCGGGTCTGCGCCCCTCTCCGTGTGGAGCCCACCTGCATGTACTGGCTCCCCAAC  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  ATGCACGGCAGGAGCGGCGGCCCAGCACTTGGCACTGGCCACTTGCAGACAAGAAGACAAGAAAATGATTTGAG  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  GACAGCTTCAATCGCGGTGTGAAGAAGAAAGCAGCAAAACGACCACTGAAAACAACGCCGGTGGCAAAATATCC  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  AAAGAAAGGGTCCCAAGCGGTACATCGTCATAGCCGGAAACAGTCAGAGCCACCAGCCAATGATCTTTTCAATG  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  CTGCGAAAGCTGCCAAAAGTGACATGCAGCACCGAGAAGTCCGCGTGAAGTGCGTGAAGGCTCTGAAAGGGCTG  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  TACGGTAACCGGGACCTGACCGCACGCCTGGAGCTCTTCACTGGCCGCTTCAAGGACTGGATGGTTTCCATGAT  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  CATGGACAGAGAGTACAGTGTGGCAGTGGAGGCCGTCAGATTACTGATACTTATCCTTAAACTTTTCTACCCTG  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  AGTGCGAGATAAGAACGATGGGTGGAAGAGAGCAACGCCAGAGCCCAGGTGCCCAGAGGACTTTCTTCCAGCTT  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  CTGCTGTCCTTCTTTGTGGAGAGCAAGCAAATCGCAGTCTTCTCCAGGCTGACAAGGCGAAGGGCATGGCTTCG  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  AAGTGCAAAAGAGTCATCATGAAACATCATGAATCATGAATCATTAGGCGTCTTCCCTTCGCTCCCCACTTTTT  740

Query    1  ----------------ATGGAGTCTCGCTCTGTTGCCCAGGCTGGAGTGCAGTGGCCTGATCTCGGCTCACTGC  58
                            |..|||||||||||||||||||||||||||||.||||||...|||||.||||||||||
Sbjct  741  TTTTTTTTTTTTTGAGACTGAGTCTCGCTCTGTTGCCCAGGCTGGAGTACAGTGGTGCGATCTTGGCTCACTGC  814

Query   59  AACCTCTGCCTCCCAGGTTCAAGCGATTCTTCTGCCTCAGCCTCCAGAGTAGCTGGGACTATAGACATG----C  128
            |||||||||||||..|||||||||||||||.|||||..|||||||.||||||||||||.|    |||.|    |
Sbjct  815  AACCTCTGCCTCCTGGGTTCAAGCGATTCTCCTGCCGTAGCCTCCTGAGTAGCTGGGATT----ACAGGTCCCC  884

Query  129  ACCACCACGCCCGGCTAATTT-------------TGTATTTTTGGTCGAGACGGGGTTTTGCCATGTTAGTCAG  189
            .|||||||.||.|||||||||             |.|||||||.||.||||.||||||||||||||||.|.|||
Sbjct  885  GCCACCACACCTGGCTAATTTTCTTATTTATTTATTTATTTTTAGTAGAGATGGGGTTTTGCCATGTTGGCCAG  958

Query  190  GCTGGTCTTGAACTCCTGACCTCAAGTGATCCACC-ACCTCGGCCTCCCAAAGTGTTGAGA-------------  249
            ||||||||.|||||||||||||||||||||||||| .|.|.||||||||||||||.||.||             
Sbjct  959  GCTGGTCTCGAACTCCTGACCTCAAGTGATCCACCTGCTTTGGCCTCCCAAAGTGCTGGGATTACAGGCGTAAG  1032

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 1033  CCATTGCACCCAACTCACTCCCCACCTTAAAACCAAAAGCGCTCTGGCTCTCAATGGAGACATCAAGCCCTCCC  1106

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 1107  TGCCCCTTCTCCCTCCCCTTTCAGAGAATCTCCAGGAATTTCTGCCATTGTGCAGGGAGCAATTGAAAAATCAG  1180

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 1181  TTAGTTCAGCTGGGTGCAGTGGCTCATGTCTGTAATCCCAGCACTTTGGGAGGCTGAGGCGGGCAGATCACCTG  1254

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 1255  AGGCCAGGAGTTGGAGACCAGCCTGGCCAGCACAGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCG  1328

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 1329  GGCGTGGTGATGGGCACCTGTAATCCCAGCTACTCTGGAGGCTGAGGCAGGAGAATGGCGTGAACCTGGGAGGT  1402

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 1403  GGAGCTTGCAGTGAGCCGAGACTGCAGCATTGCACTCCAGCCTGCGCAACAAGAGTGAAACTGTCTCAAAAAAC  1476

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 1477  AAAACAAAACAAAACACAAAAAGAAAGAAAAAAGGAAAAATCAGTTAGTTCGATTATTAGAAGACTAGATTATT  1550

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 1551  GCTCAGCAGTAACCACTCCTTTCCCACAAACTCCCCTCTCTAGGAGGAATGTACCTCCCCACCCATTCCTGTTA  1624

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 1625  GGCTTGGCCAGGTGAATCGCTTTGGCCAATAGAATGTAACTGACAAGGTGAGCAGAGATTTGCAGTGGGCTTGT  1698

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 1699  GCTTGGTGCTGGTCCTCCGGGGCTCCTGCCTTTAGCCAGGGGAAGCACACTCCCCAGCCCCTCCTTAGCCCTCT  1772

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 1773  GGCCCTGGGGAGAATGAGAGGCATGTGGCACAGTCCTGGACCCAGCCGTGGCTGGGAGCAAGCCTGGAAGCTTG  1846

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 1847  AGCGAGAGATAAATGCTTGGTCTTTTTGTTTGAGACTAAGTCTCGCTCTATCGCCCAGGCTGGAGTGCAGTGTG  1920

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 1921  GCACAATCTCAGCTCATTGCAACCTCCACCTCCCAGGTTCAAGCTATTCTCCTGCTTCAGCCTCCCAAGTAGCT  1994

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 1995  GGGACTACAGCCAAATTGGAAGACCCACTTCTCTGGACTGGATGCTGCATTGAATTGAGCAAAGGAACTGAGTG  2068

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2069  CCCGGGGAGCTCAAAGGGAAGCAGCCCAGCCTTCCTTCCGGGGCAGAGCAGTGGTGGGGACCTGTTTCCAGCTG  2142

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2143  CTTGTGCCCCCCACTTCATGGAGGAGGGACCAGGGATCCTCAGAGGAGAGGGTGATGTTTGACAGTGGCTGCCT  2216

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2217  GCCCTGAAAATCGCCCTTGTCTGTCCAGCCTGGCCTGAATTTCACCCACATCAACCCACATGGGATACTTTATT  2290

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2291  TATTTATTTATCTATTTATTTATTTATTTATTTATTTTAGAGCCAGGGTCTCACCCTGTGGCCCAGGCTGGAGT  2364

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2365  GCCGTGGTGCTATCATAGCTCACTGCAGCCTCAAACTCCTGGGCTCAAGTGATCCTCCCGCCTCAGCCTCCAGA  2438

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2439  GTAGCTGGGACTACAGGAACACACCACTGTGCCTGGCTTATTTTTCTTTTTTTTTTTGGTAGAGATGGGGGTCT  2512

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2513  CTCTATGTTGCCCAGGCTGGTCTCAAACTCCTGGCCTCAAGTGATCCTCCTGCCTCGGCCTCCCAAAGTACTGG  2586

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2587  GATTACAGAATCGGCTCCCAGACACCTGCCACTCGTGAATGCATCTGATAAACTCACTCACACTGAGGCCTTGG  2660

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2661  GGACTGAGAGTGCGATGACATGGATCCTGCGGACAAACCGCCCCAGGGCGTACCTAGCACCGAAGCATCAGGCG  2734

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2735  CCACTAGGTCTCCAGCTCCTTCTCGGATGACGTCCTTCAGCACGCCCCGGTCCCCCGAGATGTCCAGCATCCTC  2808

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2809  TGACTTAACCGCTCGTACAGGGACTGATGGAGAATGAAAGCCAGGCCTCAGAGCCGCAGACCCACCCGGCCACC  2882

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2883  CCTCAGCGTCTACGCCCCCACGTCTGGGCCCTCACCTGGCCGGGGGCGTCGTCCCCTTCCAGGACTCCCTGGTT  2956

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2957  TAACGCGCTTCCCCCCATGTCCTAGCTGCCCTCCCTGTGGCGTGAGCCTTCGGCCTGGTGCGCCCCGCTGCCCT  3030

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 3031  TCCTGGCTGTGACTCTGGTGGGGTTCCGAAGGCCCCTTTATGCCCGGCAGACCCCTACCGACGGCGGCATTCCA  3104

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 3105  TTCTGGGGCCACGAGGAGGCACTCATCGTTTCGTTCCAACCGCCGCCAACGGCCCTGGCCCTCGCGAGCTCTGG  3178

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 3179  AACTACAGAGGTCGCACGAGGCTCGCTCTGAGCCCAGGCTGGAGTTCAGTGATGGATCTCAGCTCACTGCAGCC  3252

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 3253  GCCACCTCCTGGGCTCAAGAGATCCTCCTGCCTCGGCCTCCCAAGTAGCTGGGATTACAGACGTGCACCACCAG  3326

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 3327  GCCCAGCTAATTTATTTTTTAGTTTTTAATTTGCTGGTAAGATGGTTTGTAGCTTTGTTGCCTAGGCTGGTCTT  3400

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 3401  GAACTCCTGGCTTCAAGCGATCCTCCAGTCTTGACCTCCCAAAGTGCTGGGATTATAGGCGTAGGCTACAGCCA  3474

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 3475  ACTTTCAATACTGCCCCATTGGGGGTTACGTTTCCAACACATGAAATTAGGAGGATACATTCAAACCACAGCAG  3548

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 3549  TATATTATGACCATAATATTCATTAACTGTGTAACAGGCTGGGCGCGGTGGCTCACACCTGTAATCCCAGCACT  3622

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 3623  TTGGGAGACCAGAGTGGGTAGATCACTCGAGGTCAGGAGTTTGAGACCAGCCTGGCCCACATGATGAAACCGCC  3696

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 3697  TCTCTACTAAAAATACAAAAAATTAGCCGGTGTGGTGGCAGGCGCCTGTAACCTCAGCTACTTGGGAGGCTGAG  3770

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 3771  GCAGGAGAATCACTTGAATCCGGGAGGTGGAGGTGGCAGTGAGCCTGATTGCACCACTGCACTCCAGCCTGGGC  3844

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 3845  AACAAGAGCAAAACTCTGTCTCAATAAACAAACAAACAAACAAAACCTGTATAACAGAGTGTCATTGAATTTCT  3918

Query  250  -------------------------------------------  249
                                                       
Sbjct 3919  AAACGTTGAAAGACTTCACATTAAAAAAAAACTCACAATTTAA  3961

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