Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_10792
- Subject:
- XR_002957126.1
- Aligned Length:
- 5872
- Identities:
- 216
- Gaps:
- 5624
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GGCGGCTCCGCGCTCGGCGAACATGGCGGCGGCGACGGTCGGGCGGGACACTTTACCTGAGCATTGGTCCTACG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GGGTGTGCCGGGATGGCCGCGTCTTCTTCATCAATGACCAGCTCCGCTGCACGACCTGGCTGCATCCGCGCACC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GGGGAGCCCGTCAACTCGGGCCACATGATCCGCTCAGACCTGCCCCGCGGCTGGGAGGAGGGCTTCACGGAGGA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GGGCGCCAGCTACTTCATCGACCATAACCAGCAGACCACAGCATTCAGGCATCCTGTGACGGGACAGTTTTCTC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CAGAAAATAGTGAATTCATTCTTCAAGAAGAGCCGAATCCACATATGTCGAAGCAAGACAGAAACCAAAGACCG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TCCAGCATGGTCAGTGAAACATCCACGGCTGGGACCGCCTCCACCCTGGAGGCCAAGCCTGGACCCAAGATCAT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 AAAGTCCAGCAGTAAAGTCCACAGCTTTGGGAAGAGAGACCAGGCCATTCGGAGGAACCCCAATGTTCCCGTGG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TGGTGAGGGGCTGGCTGCACAAGCAGGACAGTTCTGGGATGAGGCTGTGGAAAAGGAGGTGGTTTGTGCTTGCT 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GATTACTGCTTATTTTACTATAAAGACAGCCGAGAAGAAGCGGTCCTCGGGAGCATCCCCTTGCCCAGCTACGT 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GATCTCTCCTGTGGCCCCTGAGGATCGCATAAGCCGCAAATATTCCTTTAAGGCTGTGCACACGGGGATGCGAG 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 CGCTCATCTATAACAGCTCCACAGCGGGCTCTCAGGCCGAGCAGTCAGGCATGAGGACCTACTACTTCAGTGCC 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 GACACCCAGGAGGACATGAACGCTTGGGTCAGGGCCATGAACCAGGCTGCACAGGTGCTGTCTCGATCGTCACT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 GAAGAGGGATATGGAGAAGGTGGAGCGGCAGGCTGTCCCCCAGGCCAACCACACAGAGTCCTGTCACGAATGTG 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 GCCGGGTGGGACCCGGACATACGAGAGATTGTCCTCATCGTGGCCATGATGACATTGTCAACTTCGAGAGGCAG 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 GAGCAGGAGGGAGAGCAGTACCGTTCCCAGAGGGACCCACTGGAGGGCAAGCGGGACCGGAGCAAGGCCAGGTC 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 TCCGTACTCGCCAGCCGAGGAGGATGCCTTGTTTATGGATTTACCCACTGGCCCAAGAGGCCAGCAGGCACAGC 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 CCCAACGGGCAGAGAAGAATGGAATGCTGCCTGCCTCATATGGCCCAGGAGAACAGAATGGGACTGGTGGGTAC 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 CAGCGGGCCTTTCCTCCCAGGACCAACCCTGAAAAACACAGCCAAAGGAAGAGCAATCTGGCCCAGGTGGAGCA 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 CTGGGCAAGGGCCCAGAAAGGGGATAGCAGGAGTCTTCCCTTGGACCAGACGCTTCCTCGCCAGGGTCCTGGCC 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 AATCCCTGTCCTTCCCAGAAAACTACCAGACTCTTCCCAAGAGCACCCGACACCCCTCGGGGGGCTCCTCGCCA 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 CCTCCCCGAAACCTGCCAAGTGACTACAAGTATGCGCAGGACCGAGCCAGCCACCTGAAGATGTCGAGTGAAGA 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 GCGCCGGGCGCACCGGGATGGCACCGTGTGGCAGCTCTACGAGTGGCAGCAGCGCCAGCAGTTCCGGCACGGCA 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 GCCCCACAGCGCCCATCTGCCTTGGCTCCCCAGAGTTCACCGACCAGGGCCGGAGCAGGAGCATGCTAGAGGTG 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 CCCCGCTCCATCTCTGTGCCTCCATCTCCCTCGGACATCCCTCCCCCAGGACCCCCAAGGGTCTTCCCACCCCG 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 GCGGCCACACACACCAGCAGAGCGAGTCACAGTGAAGCCACCGGACCAGAGGAGGAGTGTGGACATCTCGCTGG 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 GGGATTCTCCAAGGAGGGCACGGGGCCACGCTGTCAAGAACTCATCTCATGTGGACCGACGCTCCATGCCCTCC 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 ATGGGTTACATGACCCACACCGTCAGCGCTCCCAGTTTACATGGAAAATCGCTGGAGGAGCTCTCGTTGCTTCT 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 CACCCGGTTAAGGCGGCACCAGGCCAAGTTGGCCAGTGTGCGAAATTTCGCCATCAGCCAGTTACTGCAGCACC 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 AGCTGACCTTTCCCACCTGCCAGGCTGATGATACCTACCTCCAGCTGAAGAAAGACCTGGAGTACCTGGATCTA 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 AAGATTAAAAATAATGAACCTTTGATCAACGTGCTTTACAAAGTGCTGAAGAAGTCAGCACGGGGCTGTCGGCC 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 CAGGAGAAGCATGACAGGCCGGGACCTTCTCAAGGATCGAAGTCTGAAGCCTGTGAAGATCGCTGAGAGCGACA 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 CTGACGTCAAACTGAGCATCTTCTGTGAACAAGACAGGGTCCTCCAGGACTTGGAAGACAAGATACGAGCCCTT 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 AAAGAGAACAAAGACCAGCTAGAATCTGTGCTGGAGGTGTTGCACAGACAGATGGAGCAGTACCGAGACCAGCC 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 CCAGCACTTGGAGAAGATTGCCTACCAGCAGAAGTTGCTGCAGGAGGACCTTGTCCATATCCGAGCTGAGCTCT 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 CCAGAGAGTCCACTGAGATGGAAAATGCTTGGAACGAATACCTGAAGTTGGAGAATGATGTGGAACAGCTGAAG 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 CAGACCCTGCAGGAGCAACACAGAAGAGCCTTTTTTTTCCAGGAGAAATCGCAGATACAGAAAGATCTATGGAG 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 AATTGAAGATGTCACTGCAGGCCTGAGTGCAAATAAAGAGAACTTCAGAATTCTAGTGGAGTCAGTAAAAAATC 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 CGGAGAGAAAAACGGTGCCTTTGTTTCCTCACCCGCCTGTGCCTTCACTCTCAACTTCTGAGAGCAAGCCGCCC 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 CCACAGCCCAGTCCTCCCACCAGCCCTGTGCGGACCCCTCTGGAGGTTCGACTCTTCCCCCAGCTGCAAACCTA 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 CGTGCCGTACCGACCTCACCCACCCCAGCTGAGGAAAGTGACATCCCCCCTTCAGTCACCAACTAAGGCGAAGC 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 CCAAAGTTCAGGAAGATGAAGCACCTCCCAGGCCCCCACTCCCCGAACTCTACAGCCCAGAGGACCAGCCCCCG 3034
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3035 GCTGTGCCGCCTCTGCCAAGAGAGGCCACCATCATCCGGCACACATCTGTGCGGGGCCTCAAGCGGCAGTCAGA 3108
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3109 CGAGAGGAAGCGAGACCGGGAGCTGGGGCAGTGTGTGAATGGGGATTCCAGGGTGGAGCTGCGGTCGTATGTCA 3182
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3183 GTGAGCCTGAGCTGGCGACCCTCAGCGGGGACATGGCCCAGCCCTCCCTAGGACTTGTGGGCCCTGAGAGCAGG 3256
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3257 TACCAGACGCTGCCAGGCAGAGGGCTCTCAGGGTCCACGTCAAGGCTCCAGCAGTCGTCCACCATTGCTCCCTA 3330
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3331 CGTCACACTCCGGAGGGGTCTCAATGCCGAAAGCAGCAAGGCGACCTTCCCTAGACCTAAGAGTGCCTTGGAGC 3404
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3405 GCCTGTACTCAGGGGATCACCAGCGAGGCAAGATGAGTGCAGAGGAGCAGCTGGAGCGCATGAAGCGACACCAG 3478
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3479 AAGGCCCTGGTCCGAGAGCGCAAGAGGACACTGGGCCAAGGGGAGAGGACGGGCCTGCCCTCATCTCGCTACCT 3552
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3553 CAGCCGGCCGCTCCCTGGAGATCTTGGCTCAGGGAAGAGAGGCTTTGAGCCTGCTCTGTTCTCAACAACCTGCT 3626
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3627 CAGCGGTCAAAGGCCTGTGAGGATGCAGGTCCTGGGTCAACAGGAAGTCACCACGGAGCTGGACAGTCATGGTT 3700
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3701 GGATCTTATCGTGGAAGCGTGAGCAGGACTTTGACCTGCAGTTGCTGGAACGGGTCGTGCAAGGGGAAAAAAAG 3774
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3775 GACAAGGAGGAGAATGGCTGGTTGAAAGTGCAGGCCATGCCTGTCACTGAGTTGGACCTGGAGCCTCAAGACTA 3848
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3849 TGACTTGGACATCAGCAGAGAGCTGTCCAAACCAGAGAAGGTGTCAATCCCTGAGCGCTACGTGGAGCTAGATC 3922
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3923 CCGAAGAGCCACCCAGCCTTGAGGAGCTGCAGGCGCGGTACCGCAAAGCCGAGAAGATCCGCAACATCCTCGCC 3996
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3997 CGGTCAAGCATGTGCAACCTACAGCCGACCTCAGGCCAGGACCAGAACAGTGTGGCTGACCTGGACTTGCAGCT 4070
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4071 GCAGGAGCAGGAGCGCATCATCAACATCTCCTACGCCCTGGCCTCCGAGGCCTCCCAGCGTAGCAAGCAGGTGG 4144
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4145 CAGCCCAGGCAGTGACTGACCCGTGACCCAGCATGCAAAGAAGCCTGGAGCCAGGGGCCCAGTGGAACCAGCTT 4218
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4219 CCTCCAAGGAGATGACCTTTCTGCCCCCAAGGAAACCCCTTCCAGCTGAGCAGGGAATCCGGCCGGAGGAAGGA 4292
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4293 GCAGCTTACCGACTGCGGGTGTTCACCACAGGCCAGGCCCTAATATGCACCCACTAGTTTAGCTCAGACTCCTC 4366
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4367 TCTACATATGAATGGCAAAGGCACTTTTGATATACACTGTAAAATACACTGTATTTTAGAATCGGAATCTATTT 4440
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4441 TCTAATGTTCCCCTCAAGGGCTGAGTGGCAGGAAGGTTGAGGATGCAGGACTTTGCAGCTGCACGTACAGATTC 4514
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4515 AGGTACTTCTGGGTGACAGGTGTTGTGGGGGCAGGAAGGGCGGGGCAAGCCGAGGCTAGTCCAACTTCCAATGA 4588
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4589 CCTCAGGAGAAAGTGAGATTTAAAGAGGTGTTCCCAGTAGACTCCAGCAAGAGGCTGGTTGGCGTGCTGTCTGG 4662
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4663 GAGAAGAGGGGCCCTTGGCTGCAGAGATCAGCTGTCCCTGACCTGATGACCAGCTCTGTGTGAAACTCCACGAG 4736
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4737 GATCACACGTGGAGCCCAAGTCTGTGCCTTGCCCCTTGGGTTTGGCTTAGGGGCAACAGTGTGTTCAAGAGGAC 4810
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4811 TGGGGCCCACAACCTGCCCCCAGGCTTCCTCCAGCAAAAGGCTCTTGTCAGAAAGAAAAAAGCAGTTTGCTATC 4884
Query 1 ----------------ATGGAGTCTCGCTC-TGTTGCCCAGGCTGGAGTGCAGTGGCCTGATCTCGGCTCACTG 57
|||||||.||.||| |||||||||||||||||||||.||||..||||||||.||||||
Sbjct 4885 TTTTTTTTTTTTTGAGATGGAGTTTCACTCTTGTTGCCCAGGCTGGAGTGCAATGGCACGATCTCGGTTCACTG 4958
Query 58 CAACCTCTGCCTCCCAGGTTCAAGCGATTCTTCTGCCTCAGCCTCCAGAGTAGCTGGGACTATAGACATGCACC 131
||||||||||||||..||||||||.||||||.||||||||||||||..|||||||.|||.||.||.||||..||
Sbjct 4959 CAACCTCTGCCTCCTGGGTTCAAGTGATTCTCCTGCCTCAGCCTCCCAAGTAGCTAGGATTACAGGCATGTGCC 5032
Query 132 ACCACGCCCGGCTAATTTTGTATTTTTGGTCGAGACGGGGTTTTGC--CATGTTAGTCAGGCTGGTCTTGAACT 203
|||||||||||||||||||||||||||.||.|||||||||.||| | ||||||.||.|||.||||||.|||||
Sbjct 5033 ACCACGCCCGGCTAATTTTGTATTTTTAGTAGAGACGGGGGTTT-CTTCATGTTGGTGAGGTTGGTCTCGAACT 5105
Query 204 CCTGACCTCAAGTGATCCA-CCACCTCGGCCTCCCAAAGTGTTGAGA--------------------------- 249
||||||||||.|||||.|| ||.|.||.||.|||||||||||||.||
Sbjct 5106 CCTGACCTCAGGTGATTCATCCGCTTCAGCATCCCAAAGTGTTGGGATTACAGCCGTGAGCCACCACGCCCAGC 5179
Query 250 -------------------------------------------------------------------------- 249
Sbjct 5180 CTGCTTTCATTTTTAACAGTACACATTGAAATACAGAAAAGGTGAGAGGAAGCAACTTTCATTGTATCGTAGCA 5253
Query 250 -------------------------------------------------------------------------- 249
Sbjct 5254 ATAAACTCCACACTGGGTGACATCTACCTAGAAATCCCTTCCCTCTAACCAGGCCATGATGGGAACCTTTGCTG 5327
Query 250 -------------------------------------------------------------------------- 249
Sbjct 5328 CCTGCCCTTGGAGAACCCCGGATTGGCTTCCCTGGGACTCAGGTCTGGTGGCAGGAGGGCAGCAGTGTGCCCCC 5401
Query 250 -------------------------------------------------------------------------- 249
Sbjct 5402 ACCATCCCTCATGGCCTGCCGCCAGCAGGGCCATAATGGCAGGACTTTGATTTGACTTCCAGCCCCACATGAGG 5475
Query 250 -------------------------------------------------------------------------- 249
Sbjct 5476 AGGGGGGCTACCAAGCCAGGTGCAGTGTTTGTGGCCCTTTATTTAAGTTGTTTTCTTATATTATTCTGCATATA 5549
Query 250 -------------------------------------------------------------------------- 249
Sbjct 5550 AACAATGACGTTTAAATGGAAAAAACAACAACAACGAAAACCTCCATTGGGTGGAGCCACACTTTAAATGAAAA 5623
Query 250 -------------------------------------------------------------------------- 249
Sbjct 5624 TTTCTCTTTGACTATGCTCAGAAAAAAAAATAGAATTTTGAATATATCTAGCAGTTGTTGTCTATTTTTAACTA 5697
Query 250 -------------------------------------------------------------------------- 249
Sbjct 5698 ACTCCATATGCTGCCAGTATCGACTTCATGACATTTGCCAAAATAAAATTTTATTTTTGCCTTTATAAGATTTT 5771
Query 250 -------------------------------------------------------------------------- 249
Sbjct 5772 CTTGGAAAAAATGAAATGAATATTTTGCAAGAAAAAGTTAATTTAAAAATGTAATGGTTTGCAAAAAAAATGTG 5845
Query 250 -------------------------- 249
Sbjct 5846 ATGTACAGATTAAAATATTAACCTGA 5871